RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 FBXO46Q6PJ61 603 aaPredicted RBP10.95□□□□□ -0.66
CUX1-205ENST00000425244 C4orf22Q6V702 233 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 SLC39A5Q6ZMH5 540 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 RFX8Q6ZV50 586 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 TRIM42Q8IWZ5 723 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 ADAM32Q8TC27 787 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 MTBPQ96DY7 904 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 ZNF560Q96MR9 790 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 RILPQ96NA2 401 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 PGLYRP2Q96PD5 576 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 FAM167BQ9BTA0 163 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 F8W810 466 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 STK10O94804 968 aaKnown RBP10.95□□□□□ -0.66
CUX1-205ENST00000425244 TPBGLP0DKB5 382 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 PSMB4P28070 264 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 CCNFP41002 786 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 MATKP42679 507 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 ACADSBP45954 432 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 ERFP50548 548 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 LILRA4P59901 499 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 OLIG2Q13516 323 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 KHDC1Q4VXA5 237 aaKnown RBP10.95□□□□□ -0.66
CUX1-205ENST00000425244 FAM26DQ5JW98 314 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 WASHC2DQ5SRD0 308 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 AP1ARQ63HQ0 302 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 CRLF3Q8IUI8 442 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 TP53INP2Q8IXH6 220 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 STKLD1Q8NE28 680 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 PGBD4Q96DM1 585 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 P2RY11Q96G91 374 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 PPP1R10Q96QC0 940 aaKnown RBP10.95□□□□□ -0.66
CUX1-205ENST00000425244 MED10Q9BTT4 135 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 PRDM5Q9NQX1 630 aaPredicted RBP10.95□□□□□ -0.66
CUX1-205ENST00000425244 IRAK4Q9NWZ3 460 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 MAGED2Q9UNF1 606 aaPredicted RBP10.95□□□□□ -0.66
CUX1-205ENST00000425244 SDR42E2A6NKP2 422 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 H3BRJ5 948 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 M0QYT0 321 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 KCNK1O00180 336 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 PIRO00625 290 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 KLF11O14901 512 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 GSC2O15499 205 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 DNAJC6O75061 913 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 BEST1O76090 585 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 B3GAT3O94766 335 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 F7P08709 466 aaPredicted RBP10.94□□□□□ -0.66
CUX1-205ENST00000425244 GSTA2P09210 222 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 ALDH18A1P54886 795 aaKnown RBP10.94□□□□□ -0.66
CUX1-205ENST00000425244 SLC8A3P57103 927 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 RPL10AP62906 217 aaKnown RBP10.94□□□□□ -0.66
CUX1-205ENST00000425244 KDSRQ06136 332 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 MTA1Q13330 715 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 KPNB1Q14974 876 aaKnown RBP10.94□□□□□ -0.66
CUX1-205ENST00000425244 CCDC6Q16204 474 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 EFHC1Q5JVL4 640 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 C4orf50Q6ZRC1 276 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 OSTM1Q86WC4 334 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 SIX6OS1Q8N1H7 587 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 CRYBG2Q8N1P7 616 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 B3GALNT2Q8NCR0 500 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 C3orf58Q8NDZ4 430 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 RNF139Q8WU17 664 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 AGAP3Q96P47 875 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 TUBB6Q9BUF5 446 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 LRRC4Q9HBW1 653 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 FZD10Q9ULW2 581 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 SCN5AQ14524 2016 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 TPP1O14773 563 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 COQ9O75208 318 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 UPP2O95045 317 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 BPGMP07738 259 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 CRHR1P34998 444 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 GMPRP36959 345 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 MNX1P50219 401 aaPredicted RBP10.94□□□□□ -0.66
CUX1-205ENST00000425244 SERPINB9P50453 376 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 PDE1BQ01064 536 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 GRIK3Q13003 919 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 STX3Q13277 289 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 DSC3Q14574 896 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 SLC25A52Q3SY17 297 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 SYPL2Q5VXT5 272 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 LINC01599Q8WXQ3 324 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 CDKL2Q92772 493 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 ATXN7L3BQ96GX2 97 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 TNIP3Q96KP6 325 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 HSFY1Q96LI6 401 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 C7orf26Q96N11 449 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 OLFM3Q96PB7 478 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 C20orf27Q9GZN8 174 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 TLE6Q9H808 572 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 KCNK4Q9NYG8 393 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 TAS2R1Q9NYW7 299 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 SIRPGQ9P1W8 387 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 PSAT1Q9Y617 370 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 USP3Q9Y6I4 520 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 ZNF487B1APH4 448 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 B2RBV5 119 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 USP12O75317 370 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 LYPLA1O75608 230 aaPredicted RBP10.94□□□□□ -0.66
CUX1-205ENST00000425244 DGKIO75912 1065 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms