RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 MOCS3O95396 460 aa23.02■■□□□ 1.28
PTCHD3P2-201ENST00000424937 HLA-EP13747 358 aa23.02■■□□□ 1.28
PTCHD3P2-201ENST00000424937 PTPRNQ16849 979 aa23.02■■□□□ 1.28
PTCHD3P2-201ENST00000424937 KIAA1324Q6UXG2 1013 aaKnown RBP23.02■■□□□ 1.28
PTCHD3P2-201ENST00000424937 STRADAQ7RTN6 431 aa23.02■■□□□ 1.28
PTCHD3P2-201ENST00000424937 ZNF366Q8N895 744 aa23.02■■□□□ 1.28
PTCHD3P2-201ENST00000424937 FAM172AQ8WUF8 416 aa23.02■■□□□ 1.28
PTCHD3P2-201ENST00000424937 SYN2Q92777 582 aaPredicted RBP23.02■■□□□ 1.28
PTCHD3P2-201ENST00000424937 VCPIP1Q96JH7 1222 aa23.02■■□□□ 1.28
PTCHD3P2-201ENST00000424937 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.02■■□□□ 1.28
PTCHD3P2-201ENST00000424937 TNRC6BQ9UPQ9 1833 aaKnown RBP23.02■■□□□ 1.28
PTCHD3P2-201ENST00000424937 FRYLO94915 3013 aa23.02■■□□□ 1.28
PTCHD3P2-201ENST00000424937 ASLP04424 464 aa23.01■■□□□ 1.27
PTCHD3P2-201ENST00000424937 BCKDHBP21953 392 aa23.01■■□□□ 1.27
PTCHD3P2-201ENST00000424937 P2RY2P41231 377 aa23.01■■□□□ 1.27
PTCHD3P2-201ENST00000424937 NUMBP49757 651 aa23.01■■□□□ 1.27
PTCHD3P2-201ENST00000424937 RPL7AP62424 266 aaKnown RBP23.01■■□□□ 1.27
PTCHD3P2-201ENST00000424937 ELF2Q15723 593 aa23.01■■□□□ 1.27
PTCHD3P2-201ENST00000424937 PLEKHG6Q3KR16 790 aa23.01■■□□□ 1.27
PTCHD3P2-201ENST00000424937 PLK5Q496M5 336 aa23.01■■□□□ 1.27
PTCHD3P2-201ENST00000424937 HGSNATQ68CP4 663 aa23.01■■□□□ 1.27
PTCHD3P2-201ENST00000424937 CXorf57Q6NSI4 855 aaKnown RBP23.01■■□□□ 1.27
PTCHD3P2-201ENST00000424937 DCUN1D2Q6PH85 259 aa23.01■■□□□ 1.27
PTCHD3P2-201ENST00000424937 LRRC31Q6UY01 552 aa23.01■■□□□ 1.27
PTCHD3P2-201ENST00000424937 APCDD1Q8J025 514 aa23.01■■□□□ 1.27
PTCHD3P2-201ENST00000424937 TTC17Q96AE7 1141 aa23.01■■□□□ 1.27
PTCHD3P2-201ENST00000424937 HAPLN3Q96S86 360 aa23.01■■□□□ 1.27
PTCHD3P2-201ENST00000424937 TMEM245Q9H330 911 aa23.01■■□□□ 1.27
PTCHD3P2-201ENST00000424937 WDR87Q6ZQQ6 2873 aa23■■□□□ 1.27
PTCHD3P2-201ENST00000424937 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23■■□□□ 1.27
PTCHD3P2-201ENST00000424937 E9PAM4 449 aa23■■□□□ 1.27
PTCHD3P2-201ENST00000424937 CCP110O43303 1012 aa23■■□□□ 1.27
PTCHD3P2-201ENST00000424937 SERPING1P05155 500 aa23■■□□□ 1.27
PTCHD3P2-201ENST00000424937 CASP14P31944 242 aa23■■□□□ 1.27
PTCHD3P2-201ENST00000424937 CDH4P55283 916 aa23■■□□□ 1.27
PTCHD3P2-201ENST00000424937 HDAC4P56524 1084 aa23■■□□□ 1.27
PTCHD3P2-201ENST00000424937 ZNF177Q13360 481 aaPredicted RBP23■■□□□ 1.27
PTCHD3P2-201ENST00000424937 ARL13BQ3SXY8 428 aa23■■□□□ 1.27
PTCHD3P2-201ENST00000424937 C5orf22Q49AR2 442 aa23■■□□□ 1.27
PTCHD3P2-201ENST00000424937 PPP1R15BQ5SWA1 713 aa23■■□□□ 1.27
PTCHD3P2-201ENST00000424937 ACBD5Q5T8D3 534 aaPredicted RBP23■■□□□ 1.27
PTCHD3P2-201ENST00000424937 C11orf74Q86VG3 221 aa23■■□□□ 1.27
PTCHD3P2-201ENST00000424937 ZNF683Q8IZ20 524 aa23■■□□□ 1.27
PTCHD3P2-201ENST00000424937 CENPIQ92674 756 aaPredicted RBP23■■□□□ 1.27
PTCHD3P2-201ENST00000424937 ZC3H10Q96K80 434 aaKnown RBP23■■□□□ 1.27
PTCHD3P2-201ENST00000424937 MRGPRX1Q96LB2 322 aa23■■□□□ 1.27
PTCHD3P2-201ENST00000424937 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23■■□□□ 1.27
PTCHD3P2-201ENST00000424937 DUSP15Q9H1R2 295 aaPredicted RBP23■■□□□ 1.27
PTCHD3P2-201ENST00000424937 BZW2Q9Y6E2 419 aaKnown RBP23■■□□□ 1.27
PTCHD3P2-201ENST00000424937 CLDN11O75508 207 aa22.99■■□□□ 1.27
PTCHD3P2-201ENST00000424937 CNTN5O94779 1100 aa22.99■■□□□ 1.27
PTCHD3P2-201ENST00000424937 FTLP02792 175 aaPredicted RBP22.99■■□□□ 1.27
PTCHD3P2-201ENST00000424937 RETP07949 1114 aa22.99■■□□□ 1.27
PTCHD3P2-201ENST00000424937 PLEKP08567 350 aaPredicted RBP22.99■■□□□ 1.27
PTCHD3P2-201ENST00000424937 GZMAP12544 262 aa22.99■■□□□ 1.27
PTCHD3P2-201ENST00000424937 MZF1P28698 734 aaPredicted RBP22.99■■□□□ 1.27
PTCHD3P2-201ENST00000424937 CTSOP43234 321 aaPredicted RBP22.99■■□□□ 1.27
PTCHD3P2-201ENST00000424937 ZNF143P52747 638 aaPredicted RBP22.99■■□□□ 1.27
PTCHD3P2-201ENST00000424937 OXCT1P55809 520 aa22.99■■□□□ 1.27
PTCHD3P2-201ENST00000424937 ST8SIA6P61647 398 aa22.99■■□□□ 1.27
PTCHD3P2-201ENST00000424937 SLC12A1Q13621 1099 aa22.99■■□□□ 1.27
PTCHD3P2-201ENST00000424937 BYSLQ13895 437 aaKnown RBP22.99■■□□□ 1.27
PTCHD3P2-201ENST00000424937 ALFQ53S48 1182 aa22.99■■□□□ 1.27
PTCHD3P2-201ENST00000424937 SPECC1LQ69YQ0 1117 aa22.99■■□□□ 1.27
PTCHD3P2-201ENST00000424937 VPS36Q86VN1 386 aa22.99■■□□□ 1.27
PTCHD3P2-201ENST00000424937 CACUL1Q86Y37 369 aa22.99■■□□□ 1.27
PTCHD3P2-201ENST00000424937 FRMD1Q8N878 549 aa22.99■■□□□ 1.27
PTCHD3P2-201ENST00000424937 ZNF653Q96CK0 615 aa22.99■■□□□ 1.27
PTCHD3P2-201ENST00000424937 C1orf74Q96LT6 269 aa22.99■■□□□ 1.27
PTCHD3P2-201ENST00000424937 PARVAQ9NVD7 372 aa22.99■■□□□ 1.27
PTCHD3P2-201ENST00000424937 ZNF292O60281 2723 aa22.98■■□□□ 1.27
PTCHD3P2-201ENST00000424937 SRGAP2O75044 1071 aa22.98■■□□□ 1.27
PTCHD3P2-201ENST00000424937 RTN2O75298 545 aa22.98■■□□□ 1.27
PTCHD3P2-201ENST00000424937 RHOBTB1O94844 696 aa22.98■■□□□ 1.27
PTCHD3P2-201ENST00000424937 DESP17661 470 aa22.98■■□□□ 1.27
PTCHD3P2-201ENST00000424937 MAMLD1Q13495 774 aa22.98■■□□□ 1.27
PTCHD3P2-201ENST00000424937 TRIM14Q14142 442 aa22.98■■□□□ 1.27
PTCHD3P2-201ENST00000424937 MAP7D1Q3KQU3 841 aa22.98■■□□□ 1.27
PTCHD3P2-201ENST00000424937 RNF219Q5W0B1 726 aaPredicted RBP22.98■■□□□ 1.27
PTCHD3P2-201ENST00000424937 PMS2CLQ68D20 193 aa22.98■■□□□ 1.27
PTCHD3P2-201ENST00000424937 CCDC185Q8N715 623 aa22.98■■□□□ 1.27
PTCHD3P2-201ENST00000424937 OR52K2Q8NGK3 314 aa22.98■■□□□ 1.27
PTCHD3P2-201ENST00000424937 CNPY3Q9BT09 278 aa22.98■■□□□ 1.27
PTCHD3P2-201ENST00000424937 MKRN2Q9H000 416 aaKnown RBP22.98■■□□□ 1.27
PTCHD3P2-201ENST00000424937 PRDM16Q9HAZ2 1276 aa22.98■■□□□ 1.27
PTCHD3P2-201ENST00000424937 MPP6Q9NZW5 540 aa22.98■■□□□ 1.27
PTCHD3P2-201ENST00000424937 CNOT8Q9UFF9 292 aaKnown RBP22.98■■□□□ 1.27
PTCHD3P2-201ENST00000424937 CYP8B1Q9UNU6 501 aa22.98■■□□□ 1.27
PTCHD3P2-201ENST00000424937 ERVW-1Q9UQF0 538 aa22.98■■□□□ 1.27
PTCHD3P2-201ENST00000424937 IGLV3-10A0A075B6K4 115 aa22.97■■□□□ 1.27
PTCHD3P2-201ENST00000424937 MAP3K13O43283 966 aa22.97■■□□□ 1.27
PTCHD3P2-201ENST00000424937 EPN2O95208 641 aa22.97■■□□□ 1.27
PTCHD3P2-201ENST00000424937 RHOCP08134 193 aa22.97■■□□□ 1.27
PTCHD3P2-201ENST00000424937 ADRA1BP35368 520 aa22.97■■□□□ 1.27
PTCHD3P2-201ENST00000424937 COPAP53621 1224 aa22.97■■□□□ 1.27
PTCHD3P2-201ENST00000424937 ECT2LQ008S8 904 aa22.97■■□□□ 1.27
PTCHD3P2-201ENST00000424937 OGDHQ02218 1023 aa22.97■■□□□ 1.27
PTCHD3P2-201ENST00000424937 SPEM2Q0P670 501 aa22.97■■□□□ 1.27
PTCHD3P2-201ENST00000424937 CAMK2GQ13555 558 aaPredicted RBP22.97■■□□□ 1.27
PTCHD3P2-201ENST00000424937 PLEKHA7Q6IQ23 1121 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms