RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 RRAGAQ7L523 313 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 RABEPKQ7Z6M1 372 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 SGMS1Q86VZ5 419 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 RHOT1Q8IXI2 618 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 YAF2Q8IY57 180 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 ADGRF2Q8IZF7 708 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 RTL3Q8N8U3 475 aaKnown RBP3.9□□□□□ -1.79
SF3B1-205ENST00000424674 MRPL43Q8N983 215 aaKnown RBP3.9□□□□□ -1.79
SF3B1-205ENST00000424674 PCSK9Q8NBP7 692 aaKnown RBP3.9□□□□□ -1.79
SF3B1-205ENST00000424674 LINS1Q8NG48 757 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 OR6J1Q8NGC5 347 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 ZCCHC10Q8TBK6 192 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 CCDC110Q8TBZ0 833 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 SEPT1Q8WYJ6 367 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 POMGNT1Q8WZA1 660 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 CPT1BQ92523 772 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 RABGGTAQ92696 567 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 DPF2Q92785 391 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 SLC7A6OSQ96CW6 309 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-205ENST00000424674 PDLIM5Q96HC4 596 aaKnown RBP3.9□□□□□ -1.79
SF3B1-205ENST00000424674 COG3Q96JB2 828 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 BRD8Q9H0E9 1235 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 SLC25A18Q9H1K4 315 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 OPA3Q9H6K4 179 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 MANSC1Q9H8J5 431 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 AGO3Q9H9G7 860 aaKnown RBP3.9□□□□□ -1.79
SF3B1-205ENST00000424674 MRPL44Q9H9J2 332 aaKnown RBP3.9□□□□□ -1.79
SF3B1-205ENST00000424674 PDE11AQ9HCR9 933 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 RBM12Q9NTZ6 932 aaKnown RBP3.9□□□□□ -1.79
SF3B1-205ENST00000424674 SAE1Q9UBE0 346 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-205ENST00000424674 DNAJB9Q9UBS3 223 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 PRSS50Q9UI38 385 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 SCOCQ9UIL1 159 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 ITM2BQ9Y287 266 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 DNAJC16Q9Y2G8 782 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 WDR37Q9Y2I8 494 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 MED16Q9Y2X0 877 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 RUSC2Q8N2Y8 1516 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 ARPC4-TTLL3A0A0A6YYG9 625 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 EFCAB8A8MWE9 144 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 HNRNPCL2B2RXH8 293 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 GPR89AB7ZAQ6 455 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 TMEM232C9JQI7 657 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 BTN3A1O00481 513 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 PLSCR1O15162 318 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 KLK10O43240 276 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 NARSO43776 548 aaKnown RBP3.89□□□□□ -1.79
SF3B1-205ENST00000424674 HNRNPCL1O60812 293 aaKnown RBP3.89□□□□□ -1.79
SF3B1-205ENST00000424674 ENTPD3O75355 529 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 KRT38O76015 456 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 TUBB4AP04350 444 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 GPR89BP0CG08 455 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 GAAP10253 952 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 TXNP10599 105 aaKnown RBP3.89□□□□□ -1.79
SF3B1-205ENST00000424674 PDHBP11177 359 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 FDPSP14324 419 aaKnown RBP3.89□□□□□ -1.79
SF3B1-205ENST00000424674 IL1R1P14778 569 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 HOXC8P31273 242 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 GGT5P36269 586 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 CASP3P42574 277 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 FLT3LGP49771 235 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 ZNF81P51508 661 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 LUMP51884 338 aaPredicted RBP3.89□□□□□ -1.79
SF3B1-205ENST00000424674 SOX8P57073 446 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 EIF4A1P60842 406 aaKnown RBP3.89□□□□□ -1.79
SF3B1-205ENST00000424674 YPEL5P62699 121 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 CCNA1P78396 465 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 COG7P83436 770 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 ATP8B2P98198 1209 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 CYP4A11Q02928 519 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 MECOMQ03112 1051 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 C17orf67Q0P5P2 114 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 CETN1Q12798 172 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 PTP4A2Q12974 167 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 CAMK2DQ13557 499 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 PTK6Q13882 451 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 HABP2Q14520 560 aaPredicted RBP3.89□□□□□ -1.79
SF3B1-205ENST00000424674 RPS6KA2Q15349 733 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 DGKDQ16760 1214 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 SLC5A9Q2M3M2 681 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 MAJINQ3KP22 176 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 SUPT20HL1Q3ZLR7 823 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 ZNF628Q5EBL2 1059 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 RAB41Q5JT25 222 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 TTC22Q5TAA0 569 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 C12orf60Q5U649 245 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 EMC10Q5UCC4 262 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 CAVIN1Q6NZI2 390 aaKnown RBP3.89□□□□□ -1.79
SF3B1-205ENST00000424674 FAM111BQ6SJ93 734 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 GADL1Q6ZQY3 521 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 OTOAQ7RTW8 1153 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 RSPH3Q86UC2 560 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 MICU3Q86XE3 530 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 LRRC43Q8N309 656 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 GALNT4Q8N4A0 578 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 AFAP1Q8N556 730 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 WDTC1Q8N5D0 677 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 FRMD1Q8N878 549 aa3.89□□□□□ -1.79
SF3B1-205ENST00000424674 DRAXINQ8NBI3 349 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms