RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 REV3LO60673 3130 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 GOLGA8QA0A0J9YX86 632 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 GOLGA8OA6NCC3 632 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 GOLGA8NF8WBI6 632 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 H3BRJ5 948 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 NEMP1O14524 444 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 DPYSL4O14531 572 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 XPOTO43592 962 aaKnown RBP12.23□□□□□ -0.45
PTPRN-204ENST00000423636 TRPA1O75762 1119 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 DDHD2O94830 711 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 PTPN3P26045 913 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 NMBRP28336 390 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 TYK2P29597 1187 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 CRYMQ14894 314 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 ISLR2Q6UXK2 745 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 C14orf80Q86SX3 495 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 TDRPQ86YL5 185 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 GSDMBQ8TAX9 411 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 CENPIQ92674 756 aaPredicted RBP12.23□□□□□ -0.45
PTPRN-204ENST00000423636 OMDQ99983 421 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 TMEM216Q9P0N5 145 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 SLC2A6Q9UGQ3 507 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 TET1Q8NFU7 2136 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 ZWINTO95229 277 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 CD68P34810 354 aaPredicted RBP12.23□□□□□ -0.45
PTPRN-204ENST00000423636 PTPRCAPQ14761 206 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 GALNTL6Q49A17 601 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 OVOS1Q6IE37 1185 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 RIBC1Q8N443 379 aaPredicted RBP12.23□□□□□ -0.45
PTPRN-204ENST00000423636 CASP10Q92851 521 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 HSFY1Q96LI6 401 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 TRIM55Q9BYV6 548 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 ZFYVE28Q9HCC9 887 aa12.23□□□□□ -0.45
PTPRN-204ENST00000423636 TSR3Q9UJK0 312 aaKnown RBP12.23□□□□□ -0.45
PTPRN-204ENST00000423636 TROVE2P10155 538 aaKnown RBP eCLIP12.22□□□□□ -0.45
PTPRN-204ENST00000423636 RPL17P18621 184 aaKnown RBP12.22□□□□□ -0.45
PTPRN-204ENST00000423636 PDE1CQ14123 709 aaPredicted RBP12.22□□□□□ -0.45
PTPRN-204ENST00000423636 UPP1Q16831 310 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 FBXO48Q5FWF7 155 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 STRA8Q7Z7C7 330 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 NT5DC4Q86YG4 428 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 C10orf107Q8IVU9 208 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 DENND6AQ8IWF6 608 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 TEKT4Q8WW24 435 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 MARK4Q96L34 752 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 SMIM14Q96QK8 99 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 MIPEPQ99797 713 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 FOXP3Q9BZS1 431 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 KCNK13Q9HB14 408 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 C20orf96Q9NUD7 363 aaPredicted RBP12.22□□□□□ -0.45
PTPRN-204ENST00000423636 OSER1Q9NX31 292 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 SLC39A10Q9ULF5 831 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 ARHGAP42A6NI28 874 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 SDR42E2A6NKP2 422 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 AURKAO14965 403 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 DNAJC8O75937 253 aaPredicted RBP12.22□□□□□ -0.45
PTPRN-204ENST00000423636 UNC5CO95185 931 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 MT-CO1P00395 513 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 GNAT1P11488 350 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 MSX2P35548 267 aaPredicted RBP12.22□□□□□ -0.45
PTPRN-204ENST00000423636 ETV4P43268 484 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 ATN1P54259 1190 aaPredicted RBP12.22□□□□□ -0.45
PTPRN-204ENST00000423636 USP46P62068 366 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 MXRA7P84157 204 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 ITGA9Q13797 1035 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 LPIN1Q14693 890 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 HSF5Q4G112 596 aaPredicted RBP12.22□□□□□ -0.45
PTPRN-204ENST00000423636 FASTKD1Q53R41 847 aaKnown RBP12.22□□□□□ -0.45
PTPRN-204ENST00000423636 RINLQ6ZS11 566 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 RAPH1Q70E73 1250 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 CLNKQ7Z7G1 428 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 DQX1Q8TE96 717 aaKnown RBP12.22□□□□□ -0.45
PTPRN-204ENST00000423636 GTF3C2Q8WUA4 911 aaPredicted RBP12.22□□□□□ -0.45
PTPRN-204ENST00000423636 E2F7Q96AV8 911 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 GORASP1Q9BQQ3 440 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 MTG1Q9BT17 334 aaPredicted RBP12.22□□□□□ -0.45
PTPRN-204ENST00000423636 DHRS4Q9BTZ2 278 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 CYP4F11Q9HBI6 524 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 MTO1Q9Y2Z2 717 aaKnown RBP12.22□□□□□ -0.45
PTPRN-204ENST00000423636 DGKIO75912 1065 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 ARRB2P32121 409 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 PNPLA4P41247 253 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 TREML1Q86YW5 311 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 CFAP52Q8N1V2 620 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 GIPC2Q8TF65 315 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 PABPC5Q96DU9 382 aaKnown RBP12.22□□□□□ -0.45
PTPRN-204ENST00000423636 PLLPQ9Y342 182 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 STARD13Q9Y3M8 1113 aa12.22□□□□□ -0.45
PTPRN-204ENST00000423636 A0A1W2PQH9 124 aa12.21□□□□□ -0.45
PTPRN-204ENST00000423636 SRRM3A6NNA2 597 aaPredicted RBP12.21□□□□□ -0.45
PTPRN-204ENST00000423636 GCATO75600 419 aa12.21□□□□□ -0.45
PTPRN-204ENST00000423636 NEBLO76041 1014 aa12.21□□□□□ -0.45
PTPRN-204ENST00000423636 TSPAN8P19075 237 aa12.21□□□□□ -0.45
PTPRN-204ENST00000423636 WARSP23381 471 aaKnown RBP12.21□□□□□ -0.45
PTPRN-204ENST00000423636 ALDH3A1P30838 453 aa12.21□□□□□ -0.45
PTPRN-204ENST00000423636 ACADSBP45954 432 aa12.21□□□□□ -0.45
PTPRN-204ENST00000423636 NEK3P51956 506 aa12.21□□□□□ -0.45
PTPRN-204ENST00000423636 GSCP56915 257 aaPredicted RBP12.21□□□□□ -0.45
PTPRN-204ENST00000423636 PACS1Q6VY07 963 aa12.21□□□□□ -0.45
PTPRN-204ENST00000423636 SLC7A6OSQ96CW6 309 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms