RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 MPP7Q5T2T1 576 aa9.98□□□□□ -0.81
HERC3-204ENST00000422770 SH3PXD2AQ5TCZ1 1133 aa9.98□□□□□ -0.81
HERC3-204ENST00000422770 TTC39BQ5VTQ0 682 aaPredicted RBP9.98□□□□□ -0.81
HERC3-204ENST00000422770 FBXL22Q6P050 247 aa9.98□□□□□ -0.81
HERC3-204ENST00000422770 ASCL5Q7RTU5 278 aa9.98□□□□□ -0.81
HERC3-204ENST00000422770 CCDC170Q8IYT3 715 aa9.98□□□□□ -0.81
HERC3-204ENST00000422770 CCAR2Q8N163 923 aaKnown RBP9.98□□□□□ -0.81
HERC3-204ENST00000422770 ZNF366Q8N895 744 aa9.98□□□□□ -0.81
HERC3-204ENST00000422770 ZBTB44Q8NCP5 570 aa9.98□□□□□ -0.81
HERC3-204ENST00000422770 MDGA1Q8NFP4 955 aa9.98□□□□□ -0.81
HERC3-204ENST00000422770 OLIG1Q8TAK6 271 aa9.98□□□□□ -0.81
HERC3-204ENST00000422770 FAM172AQ8WUF8 416 aa9.98□□□□□ -0.81
HERC3-204ENST00000422770 SPACA7Q96KW9 195 aa9.98□□□□□ -0.81
HERC3-204ENST00000422770 SYT11Q9BT88 431 aa9.98□□□□□ -0.81
HERC3-204ENST00000422770 ADAM33Q9BZ11 813 aa9.98□□□□□ -0.81
HERC3-204ENST00000422770 RAB6CQ9H0N0 254 aa9.98□□□□□ -0.81
HERC3-204ENST00000422770 MUC3BQ9H195 1237 aa9.98□□□□□ -0.81
HERC3-204ENST00000422770 SEMA4AQ9H3S1 761 aa9.98□□□□□ -0.81
HERC3-204ENST00000422770 CNOT8Q9UFF9 292 aaKnown RBP9.98□□□□□ -0.81
HERC3-204ENST00000422770 FBXO10Q9UK96 956 aa9.98□□□□□ -0.81
HERC3-204ENST00000422770 ZKSCAN5Q9Y2L8 839 aa9.98□□□□□ -0.81
HERC3-204ENST00000422770 STON1Q9Y6Q2 735 aa9.98□□□□□ -0.81
HERC3-204ENST00000422770 CKAP5Q14008 2032 aa9.98□□□□□ -0.81
HERC3-204ENST00000422770 A0A087X0T9 212 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.97□□□□□ -0.81
HERC3-204ENST00000422770 A0A1B0GVM2 712 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 TCAF2A6NFQ2 919 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 SIGLEC16A6NMB1 481 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 EIF3CLB5ME19 914 aaKnown RBP9.97□□□□□ -0.81
HERC3-204ENST00000422770 DCLK1O15075 740 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 CCP110O43303 1012 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 HRO43593 1189 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 RHOCP08134 193 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 CCDC175P0C221 793 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 FAM228BP0C875 321 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 PRKCHP24723 683 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 PSMA2P25787 234 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 CSKP41240 450 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 IL12RB1P42701 662 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 PTPN9P43378 593 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 IRAK1P51617 712 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 RPL7AP62424 266 aaKnown RBP9.97□□□□□ -0.81
HERC3-204ENST00000422770 ZNF177Q13360 481 aaPredicted RBP9.97□□□□□ -0.81
HERC3-204ENST00000422770 SLC18A3Q16572 532 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 CCDC14Q49A88 953 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 USP39Q53GS9 565 aaKnown RBP9.97□□□□□ -0.81
HERC3-204ENST00000422770 FSCBQ5H9T9 825 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 PITRM1Q5JRX3 1037 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 CCDC122Q5T0U0 273 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 KIAA1211LQ6NV74 962 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 RWDD4Q6NW29 188 aaKnown RBP9.97□□□□□ -0.81
HERC3-204ENST00000422770 TFAP2DQ7Z6R9 452 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 C14orf80Q86SX3 495 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 FIBINQ8TAL6 211 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 KCNV2Q8TDN2 545 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 GAB3Q8WWW8 586 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 RLN3Q8WXF3 142 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 IGSF8Q969P0 613 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 TRIM11Q96F44 468 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 PGAP3Q96FM1 320 aaPredicted RBP9.97□□□□□ -0.81
HERC3-204ENST00000422770 EIF3CQ99613 913 aaKnown RBP9.97□□□□□ -0.81
HERC3-204ENST00000422770 PRMT1Q99873 361 aaKnown RBP9.97□□□□□ -0.81
HERC3-204ENST00000422770 IRX2Q9BZI1 471 aaPredicted RBP9.97□□□□□ -0.81
HERC3-204ENST00000422770 SLC6A17Q9H1V8 727 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 LUC7LQ9NQ29 371 aaKnown RBP9.97□□□□□ -0.81
HERC3-204ENST00000422770 PARVAQ9NVD7 372 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 ARHGEF38Q9NXL2 777 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 MPP6Q9NZW5 540 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 KIAA1522Q9P206 1035 aaPredicted RBP9.97□□□□□ -0.81
HERC3-204ENST00000422770 THAP10Q9P2Z0 257 aaPredicted RBP9.97□□□□□ -0.81
HERC3-204ENST00000422770 ADAMTS1Q9UHI8 967 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 VPS28Q9UK41 221 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 REXO2Q9Y3B8 237 aaKnown RBP9.97□□□□□ -0.81
HERC3-204ENST00000422770 STARD13Q9Y3M8 1113 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 EPN1Q9Y6I3 576 aaPredicted RBP9.97□□□□□ -0.81
HERC3-204ENST00000422770 PLXND1Q9Y4D7 1925 aa9.97□□□□□ -0.81
HERC3-204ENST00000422770 NUP205Q92621 2012 aa9.96□□□□□ -0.81
HERC3-204ENST00000422770 PROB1E7EW31 1015 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 E9PAM4 449 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 GFRA2O00451 464 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 NPC1O15118 1278 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 TIMM44O43615 452 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 LILRB5O75023 590 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 GABRG2P18507 467 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 NDUFV2P19404 249 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 MSNP26038 577 aaKnown RBP9.96□□□□□ -0.82
HERC3-204ENST00000422770 CNR2P34972 360 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 GSCP56915 257 aaPredicted RBP9.96□□□□□ -0.82
HERC3-204ENST00000422770 EIF4EBP2Q13542 120 aaPredicted RBP9.96□□□□□ -0.82
HERC3-204ENST00000422770 ELF2Q15723 593 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 EFHC2Q5JST6 749 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 TMEM215Q68D42 235 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 ALKBH5Q6P6C2 394 aaKnown RBP9.96□□□□□ -0.82
HERC3-204ENST00000422770 ARCQ7LC44 396 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 ADIPOR2Q86V24 386 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 KBTBD6Q86V97 674 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 CCDC185Q8N715 623 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 NELL1Q92832 810 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 NT5C3BQ969T7 300 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 PACSIN1Q9BY11 444 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms