RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 C2CD4BA6NLJ0 364 aa20.95■□□□□ 0.94
GTF3A-202ENST00000419181 PRR5-ARHGAP8B1AHC4 643 aa20.95■□□□□ 0.94
GTF3A-202ENST00000419181 MOCS3O95396 460 aa20.95■□□□□ 0.94
GTF3A-202ENST00000419181 C7P10643 843 aa20.95■□□□□ 0.94
GTF3A-202ENST00000419181 ARHGAP8P85298 464 aa20.95■□□□□ 0.94
GTF3A-202ENST00000419181 C1QBPQ07021 282 aaKnown RBP20.95■□□□□ 0.94
GTF3A-202ENST00000419181 SLC12A1Q13621 1099 aa20.95■□□□□ 0.94
GTF3A-202ENST00000419181 PUM1Q14671 1186 aaKnown RBP eCLIP20.95■□□□□ 0.947e-7■■■□□ 15.3
GTF3A-202ENST00000419181 E4F1Q66K89 784 aaPredicted RBP20.95■□□□□ 0.94
GTF3A-202ENST00000419181 CXorf57Q6NSI4 855 aaKnown RBP20.95■□□□□ 0.94
GTF3A-202ENST00000419181 SLC36A4Q6YBV0 504 aa20.95■□□□□ 0.94
GTF3A-202ENST00000419181 ERMP1Q7Z2K6 904 aa20.95■□□□□ 0.94
GTF3A-202ENST00000419181 TMPRSS6Q8IU80 811 aa20.95■□□□□ 0.94
GTF3A-202ENST00000419181 ZNF683Q8IZ20 524 aa20.95■□□□□ 0.94
GTF3A-202ENST00000419181 APCDD1Q8J025 514 aa20.95■□□□□ 0.94
GTF3A-202ENST00000419181 C3orf20Q8ND61 904 aa20.95■□□□□ 0.94
GTF3A-202ENST00000419181 RXFP2Q8WXD0 754 aa20.95■□□□□ 0.94
GTF3A-202ENST00000419181 MRGPRX3Q96LB0 322 aa20.95■□□□□ 0.94
GTF3A-202ENST00000419181 EDEM3Q9BZQ6 932 aa20.95■□□□□ 0.94
GTF3A-202ENST00000419181 TMPRSS4Q9NRS4 437 aa20.95■□□□□ 0.94
GTF3A-202ENST00000419181 VPS45Q9NRW7 570 aa20.95■□□□□ 0.94
GTF3A-202ENST00000419181 AIPL1Q9NZN9 384 aa20.95■□□□□ 0.94
GTF3A-202ENST00000419181 USP36Q9P275 1121 aaKnown RBP20.95■□□□□ 0.94
GTF3A-202ENST00000419181 CDV3Q9UKY7 258 aaKnown RBP20.95■□□□□ 0.94
GTF3A-202ENST00000419181 DNAH14Q0VDD8 3507 aa20.95■□□□□ 0.94
GTF3A-202ENST00000419181 GON4LQ3T8J9 2241 aa20.94■□□□□ 0.94
GTF3A-202ENST00000419181 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.94■□□□□ 0.94
GTF3A-202ENST00000419181 GOLGA6L19H0YKK7 550 aa20.94■□□□□ 0.94
GTF3A-202ENST00000419181 GJB6O95452 261 aa20.94■□□□□ 0.94
GTF3A-202ENST00000419181 KRT3P12035 628 aa20.94■□□□□ 0.94
GTF3A-202ENST00000419181 PDGFRAP16234 1089 aa20.94■□□□□ 0.94
GTF3A-202ENST00000419181 SDHBP21912 280 aa20.94■□□□□ 0.94
GTF3A-202ENST00000419181 SDC4P31431 198 aa20.94■□□□□ 0.94
GTF3A-202ENST00000419181 PBX1P40424 430 aa20.94■□□□□ 0.94
GTF3A-202ENST00000419181 PTGER3P43115 390 aa20.94■□□□□ 0.94
GTF3A-202ENST00000419181 PTPN9P43378 593 aa20.94■□□□□ 0.94
GTF3A-202ENST00000419181 DHPSP49366 369 aaPredicted RBP20.94■□□□□ 0.94
GTF3A-202ENST00000419181 ATP11AP98196 1134 aa20.94■□□□□ 0.94
GTF3A-202ENST00000419181 CCDC14Q49A88 953 aa20.94■□□□□ 0.94
GTF3A-202ENST00000419181 FIGNQ5HY92 759 aa20.94■□□□□ 0.94
GTF3A-202ENST00000419181 ACBD5Q5T8D3 534 aaPredicted RBP20.94■□□□□ 0.94
GTF3A-202ENST00000419181 DGLUCYQ7Z3D6 616 aa20.94■□□□□ 0.94
GTF3A-202ENST00000419181 FAM131BQ86XD5 332 aa20.94■□□□□ 0.94
GTF3A-202ENST00000419181 TMEFF1Q8IYR6 380 aa20.94■□□□□ 0.94
GTF3A-202ENST00000419181 KDM1BQ8NB78 822 aa20.94■□□□□ 0.94
GTF3A-202ENST00000419181 OR2T3Q8NH03 318 aa20.94■□□□□ 0.94
GTF3A-202ENST00000419181 SIPA1Q96FS4 1042 aa20.94■□□□□ 0.94
GTF3A-202ENST00000419181 C1orf74Q96LT6 269 aa20.94■□□□□ 0.94
GTF3A-202ENST00000419181 DOCK4Q8N1I0 1966 aa20.94■□□□□ 0.94
GTF3A-202ENST00000419181 TCRBV5S1A1TA0A578 114 aa20.93■□□□□ 0.94
GTF3A-202ENST00000419181 AP5Z1O43299 807 aa20.93■□□□□ 0.94
GTF3A-202ENST00000419181 CLDN11O75508 207 aa20.93■□□□□ 0.94
GTF3A-202ENST00000419181 SRPRAP08240 638 aaKnown RBP20.93■□□□□ 0.94
GTF3A-202ENST00000419181 RFC1P35251 1148 aaPredicted RBP20.93■□□□□ 0.94
GTF3A-202ENST00000419181 CTSOP43234 321 aaPredicted RBP20.93■□□□□ 0.94
GTF3A-202ENST00000419181 PLK1P53350 603 aa20.93■□□□□ 0.94
GTF3A-202ENST00000419181 OXCT1P55809 520 aa20.93■□□□□ 0.94
GTF3A-202ENST00000419181 UBASH3AP57075 661 aa20.93■□□□□ 0.94
GTF3A-202ENST00000419181 ST8SIA6P61647 398 aa20.93■□□□□ 0.94
GTF3A-202ENST00000419181 FOXK2Q01167 660 aa20.93■□□□□ 0.94
GTF3A-202ENST00000419181 RPL6Q02878 288 aaKnown RBP20.93■□□□□ 0.94
GTF3A-202ENST00000419181 ARID5BQ14865 1188 aa20.93■□□□□ 0.94
GTF3A-202ENST00000419181 SF3A2Q15428 464 aaKnown RBP20.93■□□□□ 0.94
GTF3A-202ENST00000419181 ASIC2Q16515 512 aa20.93■□□□□ 0.94
GTF3A-202ENST00000419181 C15orf59Q2T9L4 293 aaPredicted RBP20.93■□□□□ 0.94
GTF3A-202ENST00000419181 RAB6CQ53S08 254 aa20.93■□□□□ 0.94
GTF3A-202ENST00000419181 ARTNQ5T4W7 220 aa20.93■□□□□ 0.94
GTF3A-202ENST00000419181 SFMBT2Q5VUG0 894 aa20.93■□□□□ 0.94
GTF3A-202ENST00000419181 ACAD10Q6JQN1 1059 aa20.93■□□□□ 0.94
GTF3A-202ENST00000419181 CYP2U1Q7Z449 544 aa20.93■□□□□ 0.94
GTF3A-202ENST00000419181 PRCCQ92733 491 aaPredicted RBP20.93■□□□□ 0.94
GTF3A-202ENST00000419181 HAPLN3Q96S86 360 aa20.93■□□□□ 0.94
GTF3A-202ENST00000419181 RAB6CQ9H0N0 254 aa20.93■□□□□ 0.94
GTF3A-202ENST00000419181 SMOC1Q9H4F8 434 aa20.93■□□□□ 0.94
GTF3A-202ENST00000419181 FBRSQ9HAH7 460 aa20.93■□□□□ 0.94
GTF3A-202ENST00000419181 PRSS16Q9NQE7 514 aa20.93■□□□□ 0.94
GTF3A-202ENST00000419181 ITM2CQ9NQX7 267 aa20.93■□□□□ 0.94
GTF3A-202ENST00000419181 DLL3Q9NYJ7 618 aa20.93■□□□□ 0.94
GTF3A-202ENST00000419181 ERVW-1Q9UQF0 538 aa20.93■□□□□ 0.94
GTF3A-202ENST00000419181 SNX10Q9Y5X0 201 aa20.93■□□□□ 0.94
GTF3A-202ENST00000419181 CACNA1AO00555 2505 aa20.93■□□□□ 0.94
GTF3A-202ENST00000419181 NYNRINQ9P2P1 1898 aaKnown RBP20.92■□□□□ 0.94
GTF3A-202ENST00000419181 IGLV3-10A0A075B6K4 115 aa20.92■□□□□ 0.94
GTF3A-202ENST00000419181 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.92■□□□□ 0.94
GTF3A-202ENST00000419181 SIGLEC16A6NMB1 481 aa20.92■□□□□ 0.94
GTF3A-202ENST00000419181 IGLV3-19P01714 112 aa20.92■□□□□ 0.94
GTF3A-202ENST00000419181 MZF1P28698 734 aaPredicted RBP20.92■□□□□ 0.94
GTF3A-202ENST00000419181 PRKCIP41743 596 aa20.92■□□□□ 0.94
GTF3A-202ENST00000419181 CDH4P55283 916 aa20.92■□□□□ 0.94
GTF3A-202ENST00000419181 ECT2LQ008S8 904 aa20.92■□□□□ 0.94
GTF3A-202ENST00000419181 ZNF177Q13360 481 aaPredicted RBP20.92■□□□□ 0.94
GTF3A-202ENST00000419181 CDO1Q16878 200 aa20.92■□□□□ 0.94
GTF3A-202ENST00000419181 HNRNPA1L2Q32P51 320 aaKnown RBP20.92■□□□□ 0.94
GTF3A-202ENST00000419181 SH3PXD2AQ5TCZ1 1133 aa20.92■□□□□ 0.94
GTF3A-202ENST00000419181 ARMCX6Q7L4S7 300 aa20.92■□□□□ 0.94
GTF3A-202ENST00000419181 STRADAQ7RTN6 431 aa20.92■□□□□ 0.94
GTF3A-202ENST00000419181 OR52K2Q8NGK3 314 aa20.92■□□□□ 0.94
GTF3A-202ENST00000419181 CENPIQ92674 756 aaPredicted RBP20.92■□□□□ 0.94
GTF3A-202ENST00000419181 ALG14Q96F25 216 aa20.92■□□□□ 0.94
GTF3A-202ENST00000419181 SELENOOQ9BVL4 669 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms