RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 CFAP52Q8N1V2 620 aa10.86□□□□□ -0.67
RFC1-203ENST00000418436 CAMKK1Q8N5S9 505 aa10.86□□□□□ -0.67
RFC1-203ENST00000418436 ALLCQ8N6M5 410 aa10.86□□□□□ -0.67
RFC1-203ENST00000418436 ZNF513Q8N8E2 541 aaPredicted RBP10.86□□□□□ -0.67
RFC1-203ENST00000418436 ZBTB44Q8NCP5 570 aa10.86□□□□□ -0.67
RFC1-203ENST00000418436 WFDC5Q8TCV5 224 aa10.86□□□□□ -0.67
RFC1-203ENST00000418436 ATOH1Q92858 354 aaPredicted RBP10.86□□□□□ -0.67
RFC1-203ENST00000418436 TRIM11Q96F44 468 aa10.86□□□□□ -0.67
RFC1-203ENST00000418436 MRFAP1L1Q96HT8 127 aa10.86□□□□□ -0.67
RFC1-203ENST00000418436 MCEEQ96PE7 176 aa10.86□□□□□ -0.67
RFC1-203ENST00000418436 HAPLN3Q96S86 360 aa10.86□□□□□ -0.67
RFC1-203ENST00000418436 ANP32EQ9BTT0 268 aa10.86□□□□□ -0.67
RFC1-203ENST00000418436 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.86□□□□□ -0.67
RFC1-203ENST00000418436 RAB6CQ9H0N0 254 aa10.86□□□□□ -0.67
RFC1-203ENST00000418436 ABHD10Q9NUJ1 306 aa10.86□□□□□ -0.67
RFC1-203ENST00000418436 POLR3BQ9NW08 1133 aaPredicted RBP10.86□□□□□ -0.67
RFC1-203ENST00000418436 ELOVL2Q9NXB9 296 aa10.86□□□□□ -0.67
RFC1-203ENST00000418436 TOR4AQ9NXH8 423 aa10.86□□□□□ -0.67
RFC1-203ENST00000418436 CACNA1HO95180 2353 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 CCDC163A0A0D9SF12 145 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 SSU72P8A0A1W2PR75 194 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 ANKRD62A6NC57 917 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 TMEM191CA6NGB0 347 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 DRGXA6NNA5 263 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 SGK1O00141 431 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 CCP110O43303 1012 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 TIMM44O43615 452 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 LILRB5O75023 590 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 LUC7L3O95232 432 aaKnown RBP10.85□□□□□ -0.67
RFC1-203ENST00000418436 KLF8O95600 359 aaPredicted RBP10.85□□□□□ -0.67
RFC1-203ENST00000418436 TPM1P09493 284 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 NTSR1P30989 418 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 HOXC13P31276 330 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 CD70P32970 193 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 ADRA1BP35368 520 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 EIF4A3P38919 411 aaKnown RBP10.85□□□□□ -0.67
RFC1-203ENST00000418436 NRLP54845 237 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 ADKP55263 362 aaKnown RBP10.85□□□□□ -0.67
RFC1-203ENST00000418436 OGDHQ02218 1023 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 ENPP2Q13822 863 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 CRY1Q16526 586 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 CDO1Q16878 200 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 EOGTQ5NDL2 527 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 EGFLAMQ63HQ2 1017 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 ALKBH5Q6P6C2 394 aaKnown RBP10.85□□□□□ -0.67
RFC1-203ENST00000418436 DCUN1D2Q6PH85 259 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 TMC6Q7Z403 805 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 TRMT11Q7Z4G4 463 aaKnown RBP10.85□□□□□ -0.67
RFC1-203ENST00000418436 ADIPOR2Q86V24 386 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 FAM131BQ86XD5 332 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 CNGA4Q8IV77 575 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 MFN1Q8IWA4 741 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 CCDC33Q8N5R6 958 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 TXNDC5Q8NBS9 432 aaKnown RBP10.85□□□□□ -0.67
RFC1-203ENST00000418436 PRR7Q8TB68 274 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 WFIKKN2Q8TEU8 576 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 FNIP1Q8TF40 1166 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 FAM172AQ8WUF8 416 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 IGSF8Q969P0 613 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 NTAN1Q96AB6 310 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 ACOX2Q99424 681 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 CNPY3Q9BT09 278 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 SIK2Q9H0K1 926 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 ZDHHC4Q9NPG8 344 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 TMPRSS4Q9NRS4 437 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 ABCB8Q9NUT2 735 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 ZSCAN32Q9NX65 697 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 STIM2Q9P246 746 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 THAP10Q9P2Z0 257 aaPredicted RBP10.85□□□□□ -0.67
RFC1-203ENST00000418436 CNOT8Q9UFF9 292 aaKnown RBP10.85□□□□□ -0.67
RFC1-203ENST00000418436 GGA2Q9UJY4 613 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 VANGL2Q9ULK5 521 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 SLC8A2Q9UPR5 921 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 PCDHGA2Q9Y5H1 932 aa10.85□□□□□ -0.67
RFC1-203ENST00000418436 CKAP5Q14008 2032 aa10.84□□□□□ -0.67
RFC1-203ENST00000418436 IGLV3-10A0A075B6K4 115 aa10.84□□□□□ -0.67
RFC1-203ENST00000418436 A0A1B0GVM2 712 aa10.84□□□□□ -0.67
RFC1-203ENST00000418436 TCAF2A6NFQ2 919 aa10.84□□□□□ -0.67
RFC1-203ENST00000418436 AKR1B15C9JRZ8 316 aaPredicted RBP10.84□□□□□ -0.67
RFC1-203ENST00000418436 PROB1E7EW31 1015 aa10.84□□□□□ -0.67
RFC1-203ENST00000418436 NPC1O15118 1278 aa10.84□□□□□ -0.67
RFC1-203ENST00000418436 PABPC1P11940 636 aaKnown RBP10.84□□□□□ -0.67
RFC1-203ENST00000418436 IRAK1P51617 712 aa10.84□□□□□ -0.67
RFC1-203ENST00000418436 DGKEP52429 567 aa10.84□□□□□ -0.67
RFC1-203ENST00000418436 NRG1Q02297 640 aaPredicted RBP10.84□□□□□ -0.67
RFC1-203ENST00000418436 DMWDQ09019 674 aa10.84□□□□□ -0.67
RFC1-203ENST00000418436 ZNF252P-AS1Q0IIN9 211 aa10.84□□□□□ -0.67
RFC1-203ENST00000418436 SCAPQ12770 1279 aa10.84□□□□□ -0.67
RFC1-203ENST00000418436 LMAN2Q12907 356 aa10.84□□□□□ -0.67
RFC1-203ENST00000418436 E2F5Q15329 346 aa10.84□□□□□ -0.67
RFC1-203ENST00000418436 SLC18A3Q16572 532 aa10.84□□□□□ -0.67
RFC1-203ENST00000418436 PTPRNQ16849 979 aa10.84□□□□□ -0.67
RFC1-203ENST00000418436 ARL13BQ3SXY8 428 aa10.84□□□□□ -0.67
RFC1-203ENST00000418436 FSCBQ5H9T9 825 aa10.84□□□□□ -0.67
RFC1-203ENST00000418436 RABGAP1LQ5R372 815 aa10.84□□□□□ -0.67
RFC1-203ENST00000418436 CCDC122Q5T0U0 273 aa10.84□□□□□ -0.67
RFC1-203ENST00000418436 DESI1Q6ICB0 168 aa10.84□□□□□ -0.67
RFC1-203ENST00000418436 CHST9Q7L1S5 443 aa10.84□□□□□ -0.67
RFC1-203ENST00000418436 LONP2Q86WA8 852 aa10.84□□□□□ -0.67
RFC1-203ENST00000418436 AHI1Q8N157 1196 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms