RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 ERVW-1Q9UQF0 538 aa15.61■□□□□ 0.09
UBXN4-203ENST00000416538 NFE2L3Q9Y4A8 694 aa15.61■□□□□ 0.09
UBXN4-203ENST00000416538 ITIH6Q6UXX5 1313 aa15.61■□□□□ 0.09
UBXN4-203ENST00000416538 PLXNB3Q9ULL4 1909 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 SPAARA0A1B0GVQ0 90 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 F5H5T6 163 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 F8VZ95 297 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 ATP5BP06576 529 aaKnown RBP15.6■□□□□ 0.09
UBXN4-203ENST00000416538 CEACAM1P13688 526 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 UCHL3P15374 230 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 VAV1P15498 845 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 CYP11B1P15538 503 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 CDK17Q00537 523 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 SLC6A3Q01959 620 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 HNRNPA1L2Q32P51 320 aaKnown RBP15.6■□□□□ 0.09
UBXN4-203ENST00000416538 WDR45BQ5MNZ6 344 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 C9orf64Q5T6V5 341 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 CDKAL1Q5VV42 579 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 TAF3Q5VWG9 929 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 FBXL22Q6P050 247 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 LAYNQ6UX15 382 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 RABEPKQ7Z6M1 372 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 C14orf80Q86SX3 495 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 CCAR2Q8N163 923 aaKnown RBP15.6■□□□□ 0.09
UBXN4-203ENST00000416538 ZNF397Q8NF99 534 aaPredicted RBP15.6■□□□□ 0.09
UBXN4-203ENST00000416538 EPS8L1Q8TE68 723 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 NUP58Q9BVL2 599 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 MIR1-1HGQ9H1L0 117 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 IL21RQ9HBE5 538 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 TMPRSS4Q9NRS4 437 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 PIGVQ9NUD9 493 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 DNAAF2Q9NVR5 837 aaKnown RBP15.6■□□□□ 0.09
UBXN4-203ENST00000416538 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.6■□□□□ 0.09
UBXN4-203ENST00000416538 SNX10Q9Y5X0 201 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 HS3ST4Q9Y661 456 aa15.6■□□□□ 0.09
UBXN4-203ENST00000416538 TYW5A2RUC4 315 aaKnown RBP15.59■□□□□ 0.09
UBXN4-203ENST00000416538 C10orf142B7Z368 130 aa15.59■□□□□ 0.09
UBXN4-203ENST00000416538 H0Y626 953 aa15.59■□□□□ 0.09
UBXN4-203ENST00000416538 ATMINO43313 823 aaPredicted RBP15.59■□□□□ 0.09
UBXN4-203ENST00000416538 ASLP04424 464 aa15.59■□□□□ 0.09
UBXN4-203ENST00000416538 ACADMP11310 421 aa15.59■□□□□ 0.09
UBXN4-203ENST00000416538 PDGFRAP16234 1089 aa15.59■□□□□ 0.09
UBXN4-203ENST00000416538 OXTRP30559 389 aa15.59■□□□□ 0.09
UBXN4-203ENST00000416538 ANP32AP39687 249 aaKnown RBP15.59■□□□□ 0.09
UBXN4-203ENST00000416538 METAP1P53582 386 aa15.59■□□□□ 0.09
UBXN4-203ENST00000416538 FOXC1Q12948 553 aa15.59■□□□□ 0.09
UBXN4-203ENST00000416538 NME3Q13232 169 aa15.59■□□□□ 0.09
UBXN4-203ENST00000416538 KRT31Q15323 416 aa15.59■□□□□ 0.09
UBXN4-203ENST00000416538 E2F5Q15329 346 aa15.59■□□□□ 0.09
UBXN4-203ENST00000416538 EFHC1Q5JVL4 640 aa15.59■□□□□ 0.09
UBXN4-203ENST00000416538 SYCP2LQ5T4T6 812 aa15.59■□□□□ 0.09
UBXN4-203ENST00000416538 ZNF776Q68DI1 518 aaPredicted RBP15.59■□□□□ 0.09
UBXN4-203ENST00000416538 XYLT1Q86Y38 959 aa15.59■□□□□ 0.09
UBXN4-203ENST00000416538 ATP6V0D2Q8N8Y2 350 aa15.59■□□□□ 0.09
UBXN4-203ENST00000416538 ZNF557Q8N988 423 aaPredicted RBP15.59■□□□□ 0.09
UBXN4-203ENST00000416538 SLC20A1Q8WUM9 679 aa15.59■□□□□ 0.09
UBXN4-203ENST00000416538 ALG14Q96F25 216 aa15.59■□□□□ 0.09
UBXN4-203ENST00000416538 RPL10LQ96L21 214 aaKnown RBP15.59■□□□□ 0.09
UBXN4-203ENST00000416538 CAMK1GQ96NX5 476 aa15.59■□□□□ 0.09
UBXN4-203ENST00000416538 NPY6RQ99463 290 aa15.59■□□□□ 0.09
UBXN4-203ENST00000416538 TMEM121BQ9BXQ6 578 aaPredicted RBP15.59■□□□□ 0.09
UBXN4-203ENST00000416538 PABPC3Q9H361 631 aaKnown RBP15.59■□□□□ 0.09
UBXN4-203ENST00000416538 FBRSQ9HAH7 460 aa15.59■□□□□ 0.09
UBXN4-203ENST00000416538 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.59■□□□□ 0.09
UBXN4-203ENST00000416538 SUSD2Q9UGT4 822 aa15.59■□□□□ 0.09
UBXN4-203ENST00000416538 DACH1Q9UI36 760 aa15.59■□□□□ 0.09
UBXN4-203ENST00000416538 VANGL2Q9ULK5 521 aa15.59■□□□□ 0.09
UBXN4-203ENST00000416538 A0A1B0GTW7 788 aa15.58■□□□□ 0.08
UBXN4-203ENST00000416538 A0A1B0GVM2 712 aa15.58■□□□□ 0.08
UBXN4-203ENST00000416538 TCAF2A6NFQ2 919 aa15.58■□□□□ 0.08
UBXN4-203ENST00000416538 UPK3BL1B0FP48 263 aa15.58■□□□□ 0.08
UBXN4-203ENST00000416538 UPK3BL2E5RIL1 263 aa15.58■□□□□ 0.08
UBXN4-203ENST00000416538 M0QYT0 321 aa15.58■□□□□ 0.08
UBXN4-203ENST00000416538 PES1O00541 588 aaKnown RBP15.58■□□□□ 0.08
UBXN4-203ENST00000416538 MID1O15344 667 aa15.58■□□□□ 0.08
UBXN4-203ENST00000416538 OPHN1O60890 802 aa15.58■□□□□ 0.08
UBXN4-203ENST00000416538 PAGE1O75459 146 aa15.58■□□□□ 0.08
UBXN4-203ENST00000416538 ADCY5O95622 1261 aa15.58■□□□□ 0.08
UBXN4-203ENST00000416538 SEMA4FO95754 770 aa15.58■□□□□ 0.08
UBXN4-203ENST00000416538 IGHV4-34P06331 123 aa15.58■□□□□ 0.08
UBXN4-203ENST00000416538 MMEP08473 750 aa15.58■□□□□ 0.08
UBXN4-203ENST00000416538 EEF1GP26641 437 aaKnown RBP15.58■□□□□ 0.08
UBXN4-203ENST00000416538 CCR1P32246 355 aa15.58■□□□□ 0.08
UBXN4-203ENST00000416538 KRT9P35527 623 aa15.58■□□□□ 0.08
UBXN4-203ENST00000416538 FLT3P36888 993 aa15.58■□□□□ 0.08
UBXN4-203ENST00000416538 GABRB2P47870 512 aa15.58■□□□□ 0.08
UBXN4-203ENST00000416538 ATXN3P54252 364 aaPredicted RBP15.58■□□□□ 0.08
UBXN4-203ENST00000416538 NOMO3P69849 1222 aa15.58■□□□□ 0.08
UBXN4-203ENST00000416538 AUHQ13825 339 aaKnown RBP15.58■□□□□ 0.08
UBXN4-203ENST00000416538 ARID5BQ14865 1188 aa15.58■□□□□ 0.08
UBXN4-203ENST00000416538 SMYD5Q6GMV2 418 aa15.58■□□□□ 0.08
UBXN4-203ENST00000416538 ZNF683Q8IZ20 524 aa15.58■□□□□ 0.08
UBXN4-203ENST00000416538 ENOX1Q8TC92 643 aaKnown RBP15.58■□□□□ 0.08
UBXN4-203ENST00000416538 SNX19Q92543 992 aa15.58■□□□□ 0.08
UBXN4-203ENST00000416538 PTPRN2Q92932 1015 aa15.58■□□□□ 0.08
UBXN4-203ENST00000416538 BIRC7Q96CA5 298 aa15.58■□□□□ 0.08
UBXN4-203ENST00000416538 KIAA1522Q9P206 1035 aaPredicted RBP15.58■□□□□ 0.08
UBXN4-203ENST00000416538 NOCTQ9UK39 431 aaKnown RBP15.58■□□□□ 0.08
UBXN4-203ENST00000416538 FNDC3AQ9Y2H6 1198 aaKnown RBP15.58■□□□□ 0.08
UBXN4-203ENST00000416538 BCAT2O15382 392 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms