RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 PTPN20Q4JDL3 420 aa18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 DPY19L2P1Q6NXN4 242 aa18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 OLFML1Q6UWY5 402 aa18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 APCDD1Q8J025 514 aa18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 CCAR2Q8N163 923 aaKnown RBP18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 ZNF397Q8NF99 534 aaPredicted RBP18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 C1orf216Q8TAB5 229 aa18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 SNX19Q92543 992 aa18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 PDCL3Q9H2J4 239 aa18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 PABPC3Q9H361 631 aaKnown RBP18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 OSGEPQ9NPF4 335 aa18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 RRN3Q9NYV6 651 aa18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 COX16Q9P0S2 106 aa18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 WASF3Q9UPY6 502 aa18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 MAP1BP46821 2468 aaKnown RBP18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 ITIH6Q6UXX5 1313 aa18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 KNL1Q8NG31 2342 aa18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 EPG5Q9HCE0 2579 aa18.15■□□□□ 0.5
PDLIM2-208ENST00000416159 EDDM13A0A1B0GTR0 161 aa18.15■□□□□ 0.5
PDLIM2-208ENST00000416159 A0A1B0GVM2 712 aa18.15■□□□□ 0.5
PDLIM2-208ENST00000416159 SPAARA0A1B0GVQ0 90 aa18.15■□□□□ 0.5
PDLIM2-208ENST00000416159 TCAF2A6NFQ2 919 aa18.15■□□□□ 0.5
PDLIM2-208ENST00000416159 TTC34A8MYJ7 566 aa18.15■□□□□ 0.5
PDLIM2-208ENST00000416159 CER1O95813 267 aa18.15■□□□□ 0.5
PDLIM2-208ENST00000416159 CTSOP43234 321 aaPredicted RBP18.15■□□□□ 0.5
PDLIM2-208ENST00000416159 PLK1P53350 603 aa18.15■□□□□ 0.5
PDLIM2-208ENST00000416159 SIM1P81133 766 aaPredicted RBP18.15■□□□□ 0.5
PDLIM2-208ENST00000416159 RAPGEF1Q13905 1077 aa18.15■□□□□ 0.5
PDLIM2-208ENST00000416159 KCNJ12Q14500 433 aa18.15■□□□□ 0.5
PDLIM2-208ENST00000416159 HSP90AA4PQ58FG1 418 aa18.15■□□□□ 0.5
PDLIM2-208ENST00000416159 C9orf64Q5T6V5 341 aa18.15■□□□□ 0.5
PDLIM2-208ENST00000416159 KLHDC7AQ5VTJ3 777 aa18.15■□□□□ 0.5
PDLIM2-208ENST00000416159 FBXL22Q6P050 247 aa18.15■□□□□ 0.5
PDLIM2-208ENST00000416159 CLEC17AQ6ZS10 378 aa18.15■□□□□ 0.5
PDLIM2-208ENST00000416159 DHX40Q8IX18 779 aaKnown RBP18.15■□□□□ 0.5
PDLIM2-208ENST00000416159 TMEM35BQ8NCS4 154 aa18.15■□□□□ 0.5
PDLIM2-208ENST00000416159 GANCQ8TET4 914 aa18.15■□□□□ 0.5
PDLIM2-208ENST00000416159 SAMSN1Q9NSI8 373 aaKnown RBP18.15■□□□□ 0.5
PDLIM2-208ENST00000416159 FBXL12Q9NXK8 326 aa18.15■□□□□ 0.5
PDLIM2-208ENST00000416159 SLCO3A1Q9UIG8 710 aa18.15■□□□□ 0.5
PDLIM2-208ENST00000416159 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.15■□□□□ 0.5
PDLIM2-208ENST00000416159 PCDHB9Q9Y5E1 797 aa18.15■□□□□ 0.5
PDLIM2-208ENST00000416159 SH3BP5O60239 455 aa18.14■□□□□ 0.49
PDLIM2-208ENST00000416159 ZNF883P0CG24 379 aa18.14■□□□□ 0.49
PDLIM2-208ENST00000416159 PNMA6AP0CW24 399 aaPredicted RBP18.14■□□□□ 0.49
PDLIM2-208ENST00000416159 EEF1GP26641 437 aaKnown RBP18.14■□□□□ 0.49
PDLIM2-208ENST00000416159 CDH5P33151 784 aaPredicted RBP18.14■□□□□ 0.49
PDLIM2-208ENST00000416159 MATKP42679 507 aa18.14■□□□□ 0.49
PDLIM2-208ENST00000416159 NME3Q13232 169 aa18.14■□□□□ 0.49
PDLIM2-208ENST00000416159 TEAD4Q15561 434 aa18.14■□□□□ 0.49
PDLIM2-208ENST00000416159 BIRC7Q96CA5 298 aa18.14■□□□□ 0.49
PDLIM2-208ENST00000416159 RPRD1AQ96P16 312 aaPredicted RBP18.14■□□□□ 0.49
PDLIM2-208ENST00000416159 GAREM1Q9H706 876 aa18.14■□□□□ 0.49
PDLIM2-208ENST00000416159 PLCB1Q9NQ66 1216 aa18.14■□□□□ 0.49
PDLIM2-208ENST00000416159 TMEM51Q9NW97 253 aa18.14■□□□□ 0.49
PDLIM2-208ENST00000416159 FHOD1Q9Y613 1164 aa18.14■□□□□ 0.49
PDLIM2-208ENST00000416159 CHD8Q9HCK8 2581 aa18.14■□□□□ 0.49
PDLIM2-208ENST00000416159 M0QYT0 321 aa18.13■□□□□ 0.49
PDLIM2-208ENST00000416159 FSBPO95073 299 aa18.13■□□□□ 0.49
PDLIM2-208ENST00000416159 TRIM16O95361 564 aa18.13■□□□□ 0.49
PDLIM2-208ENST00000416159 CYP11B1P15538 503 aa18.13■□□□□ 0.49
PDLIM2-208ENST00000416159 PDGFRAP16234 1089 aa18.13■□□□□ 0.49
PDLIM2-208ENST00000416159 CD27P26842 260 aa18.13■□□□□ 0.49
PDLIM2-208ENST00000416159 SCNN1AP37088 669 aa18.13■□□□□ 0.49
PDLIM2-208ENST00000416159 ANP32AP39687 249 aaKnown RBP18.13■□□□□ 0.49
PDLIM2-208ENST00000416159 GABRB2P47870 512 aa18.13■□□□□ 0.49
PDLIM2-208ENST00000416159 CSNK1EP49674 416 aaKnown RBP18.13■□□□□ 0.49
PDLIM2-208ENST00000416159 AFF3P51826 1226 aaKnown RBP18.13■□□□□ 0.49
PDLIM2-208ENST00000416159 BNC1Q01954 994 aa18.13■□□□□ 0.49
PDLIM2-208ENST00000416159 AUHQ13825 339 aaKnown RBP18.13■□□□□ 0.49
PDLIM2-208ENST00000416159 CST6Q15828 149 aa18.13■□□□□ 0.49
PDLIM2-208ENST00000416159 TCP11X2Q5H9J9 407 aa18.13■□□□□ 0.49
PDLIM2-208ENST00000416159 MMAAQ8IVH4 418 aaKnown RBP18.13■□□□□ 0.49
PDLIM2-208ENST00000416159 C18orf8Q96DM3 657 aa18.13■□□□□ 0.49
PDLIM2-208ENST00000416159 RPL10LQ96L21 214 aaKnown RBP18.13■□□□□ 0.49
PDLIM2-208ENST00000416159 SCNM1Q9BWG6 230 aa18.13■□□□□ 0.49
PDLIM2-208ENST00000416159 NAA15Q9BXJ9 866 aaKnown RBP18.13■□□□□ 0.49
PDLIM2-208ENST00000416159 LMBRD1Q9NUN5 540 aa18.13■□□□□ 0.49
PDLIM2-208ENST00000416159 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.13■□□□□ 0.49
PDLIM2-208ENST00000416159 STAP1Q9ULZ2 295 aa18.13■□□□□ 0.49
PDLIM2-208ENST00000416159 CABIN1Q9Y6J0 2220 aa18.13■□□□□ 0.49
PDLIM2-208ENST00000416159 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.12■□□□□ 0.49
PDLIM2-208ENST00000416159 A0A1B0GVT2 93 aa18.12■□□□□ 0.49
PDLIM2-208ENST00000416159 MID1O15344 667 aa18.12■□□□□ 0.49
PDLIM2-208ENST00000416159 TOP3BO95985 862 aaKnown RBP18.12■□□□□ 0.49
PDLIM2-208ENST00000416159 PROS1P07225 676 aa18.12■□□□□ 0.49
PDLIM2-208ENST00000416159 UCHL3P15374 230 aa18.12■□□□□ 0.49
PDLIM2-208ENST00000416159 SPINK2P20155 84 aa18.12■□□□□ 0.49
PDLIM2-208ENST00000416159 MZF1P28698 734 aaPredicted RBP18.12■□□□□ 0.49
PDLIM2-208ENST00000416159 SLC8A1P32418 973 aa18.12■□□□□ 0.49
PDLIM2-208ENST00000416159 GRIA4P48058 902 aa18.12■□□□□ 0.49
PDLIM2-208ENST00000416159 VASPP50552 380 aaPredicted RBP18.12■□□□□ 0.49
PDLIM2-208ENST00000416159 FAM193AP78312 1265 aa18.12■□□□□ 0.49
PDLIM2-208ENST00000416159 ZNF177Q13360 481 aaPredicted RBP18.12■□□□□ 0.49
PDLIM2-208ENST00000416159 TRIP6Q15654 476 aaKnown RBP18.12■□□□□ 0.49
PDLIM2-208ENST00000416159 HLA-BQ31612 363 aa18.12■□□□□ 0.49
PDLIM2-208ENST00000416159 BRMS1LQ5PSV4 323 aa18.12■□□□□ 0.49
PDLIM2-208ENST00000416159 KIAA0895LQ68EN5 471 aa18.12■□□□□ 0.49
PDLIM2-208ENST00000416159 CXorf57Q6NSI4 855 aaKnown RBP18.12■□□□□ 0.49
PDLIM2-208ENST00000416159 LRSAM1Q6UWE0 723 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms