RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.79■■□□□ 1.72
HLA-C-204ENST00000415537 STAP1Q9ULZ2 295 aa25.79■■□□□ 1.72
HLA-C-204ENST00000415537 NCKAP1Q9Y2A7 1128 aa25.79■■□□□ 1.72
HLA-C-204ENST00000415537 A0A1B0GVM2 712 aa25.78■■□□□ 1.72
HLA-C-204ENST00000415537 TCAF2A6NFQ2 919 aa25.78■■□□□ 1.72
HLA-C-204ENST00000415537 C7P10643 843 aa25.78■■□□□ 1.72
HLA-C-204ENST00000415537 PMLP29590 882 aa25.78■■□□□ 1.72
HLA-C-204ENST00000415537 ACSL1P33121 698 aa25.78■■□□□ 1.72
HLA-C-204ENST00000415537 CDH5P33151 784 aaPredicted RBP25.78■■□□□ 1.72
HLA-C-204ENST00000415537 CTSOP43234 321 aaPredicted RBP25.78■■□□□ 1.72
HLA-C-204ENST00000415537 OXCT1P55809 520 aa25.78■■□□□ 1.72
HLA-C-204ENST00000415537 ZNF252P-AS1Q0IIN9 211 aa25.78■■□□□ 1.72
HLA-C-204ENST00000415537 SFSWAPQ12872 951 aaKnown RBP25.78■■□□□ 1.72
HLA-C-204ENST00000415537 FKBP15Q5T1M5 1219 aa25.78■■□□□ 1.72
HLA-C-204ENST00000415537 FBXL22Q6P050 247 aa25.78■■□□□ 1.72
HLA-C-204ENST00000415537 RBM43Q6ZSC3 357 aaKnown RBP25.78■■□□□ 1.72
HLA-C-204ENST00000415537 SND1Q7KZF4 910 aaKnown RBP eCLIP25.78■■□□□ 1.723e-9■■■■□ 19.4
HLA-C-204ENST00000415537 CIR1Q86X95 450 aaPredicted RBP25.78■■□□□ 1.72
HLA-C-204ENST00000415537 DHX40Q8IX18 779 aaKnown RBP25.78■■□□□ 1.72
HLA-C-204ENST00000415537 ZCCHC9Q8N567 271 aaKnown RBP25.78■■□□□ 1.72
HLA-C-204ENST00000415537 GANCQ8TET4 914 aa25.78■■□□□ 1.72
HLA-C-204ENST00000415537 MRGPRX3Q96LB0 322 aa25.78■■□□□ 1.72
HLA-C-204ENST00000415537 PPP1R9BQ96SB3 815 aa25.78■■□□□ 1.72
HLA-C-204ENST00000415537 RSPH9Q9H1X1 276 aaPredicted RBP25.78■■□□□ 1.72
HLA-C-204ENST00000415537 EIF2B4Q9UI10 523 aaKnown RBP25.78■■□□□ 1.72
HLA-C-204ENST00000415537 SCML1Q9UN30 329 aa25.78■■□□□ 1.72
HLA-C-204ENST00000415537 F8VZ95 297 aa25.77■■□□□ 1.72
HLA-C-204ENST00000415537 BCAT2O15382 392 aaPredicted RBP25.77■■□□□ 1.72
HLA-C-204ENST00000415537 SIN3BO75182 1162 aa25.77■■□□□ 1.72
HLA-C-204ENST00000415537 GABRB2P47870 512 aa25.77■■□□□ 1.72
HLA-C-204ENST00000415537 AUHQ13825 339 aaKnown RBP25.77■■□□□ 1.72
HLA-C-204ENST00000415537 NUMA1Q14980 2115 aa25.77■■□□□ 1.72
HLA-C-204ENST00000415537 KRT31Q15323 416 aa25.77■■□□□ 1.72
HLA-C-204ENST00000415537 CDKAL1Q5VV42 579 aa25.77■■□□□ 1.72
HLA-C-204ENST00000415537 RPL10LQ96L21 214 aaKnown RBP25.77■■□□□ 1.72
HLA-C-204ENST00000415537 ZDHHC5Q9C0B5 715 aa25.77■■□□□ 1.72
HLA-C-204ENST00000415537 WDCPQ9H6R7 721 aa25.77■■□□□ 1.72
HLA-C-204ENST00000415537 SGK2Q9HBY8 427 aa25.77■■□□□ 1.72
HLA-C-204ENST00000415537 ANO10Q9NW15 660 aa25.77■■□□□ 1.72
HLA-C-204ENST00000415537 VANGL2Q9ULK5 521 aa25.77■■□□□ 1.72
HLA-C-204ENST00000415537 EDDM13A0A1B0GTR0 161 aa25.76■■□□□ 1.71
HLA-C-204ENST00000415537 TARSL2A2RTX5 802 aaKnown RBP25.76■■□□□ 1.71
HLA-C-204ENST00000415537 SEMA4FO95754 770 aa25.76■■□□□ 1.71
HLA-C-204ENST00000415537 LSM8O95777 96 aaKnown RBP25.76■■□□□ 1.71
HLA-C-204ENST00000415537 PDGFRAP16234 1089 aa25.76■■□□□ 1.71
HLA-C-204ENST00000415537 SULT1E1P49888 294 aa25.76■■□□□ 1.71
HLA-C-204ENST00000415537 SULT2A1Q06520 285 aa25.76■■□□□ 1.71
HLA-C-204ENST00000415537 SEMA3BQ13214 749 aa25.76■■□□□ 1.71
HLA-C-204ENST00000415537 ARID5BQ14865 1188 aa25.76■■□□□ 1.71
HLA-C-204ENST00000415537 FAM102AQ5T9C2 384 aaPredicted RBP25.76■■□□□ 1.71
HLA-C-204ENST00000415537 LRSAM1Q6UWE0 723 aa25.76■■□□□ 1.71
HLA-C-204ENST00000415537 NOP9Q86U38 636 aaKnown RBP25.76■■□□□ 1.71
HLA-C-204ENST00000415537 ANKRD20A12PQ8NF67 263 aa25.76■■□□□ 1.71
HLA-C-204ENST00000415537 OR2I1PQ8NGU4 316 aa25.76■■□□□ 1.71
HLA-C-204ENST00000415537 NPY6RQ99463 290 aa25.76■■□□□ 1.71
HLA-C-204ENST00000415537 SIK2Q9H0K1 926 aa25.76■■□□□ 1.71
HLA-C-204ENST00000415537 C6orf106Q9H6K1 298 aaPredicted RBP25.76■■□□□ 1.71
HLA-C-204ENST00000415537 DNAAF2Q9NVR5 837 aaKnown RBP25.76■■□□□ 1.71
HLA-C-204ENST00000415537 FANCLQ9NW38 375 aa25.76■■□□□ 1.71
HLA-C-204ENST00000415537 PAXBP1Q9Y5B6 917 aa25.76■■□□□ 1.71
HLA-C-204ENST00000415537 HS3ST4Q9Y661 456 aa25.76■■□□□ 1.71
HLA-C-204ENST00000415537 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP25.75■■□□□ 1.71
HLA-C-204ENST00000415537 FAM170AA1A519 330 aa25.75■■□□□ 1.71
HLA-C-204ENST00000415537 TTC34A8MYJ7 566 aa25.75■■□□□ 1.71
HLA-C-204ENST00000415537 UPK3BL1B0FP48 263 aa25.75■■□□□ 1.71
HLA-C-204ENST00000415537 UPK3BL2E5RIL1 263 aa25.75■■□□□ 1.71
HLA-C-204ENST00000415537 PAGE1O75459 146 aa25.75■■□□□ 1.71
HLA-C-204ENST00000415537 F9P00740 461 aa25.75■■□□□ 1.71
HLA-C-204ENST00000415537 SCNN1AP37088 669 aa25.75■■□□□ 1.71
HLA-C-204ENST00000415537 GRIK2Q13002 908 aa25.75■■□□□ 1.71
HLA-C-204ENST00000415537 ZNF177Q13360 481 aaPredicted RBP25.75■■□□□ 1.71
HLA-C-204ENST00000415537 BRMS1LQ5PSV4 323 aa25.75■■□□□ 1.71
HLA-C-204ENST00000415537 C9orf64Q5T6V5 341 aa25.75■■□□□ 1.71
HLA-C-204ENST00000415537 USP30Q70CQ3 517 aa25.75■■□□□ 1.71
HLA-C-204ENST00000415537 IGSF8Q969P0 613 aa25.75■■□□□ 1.71
HLA-C-204ENST00000415537 PABPC3Q9H361 631 aaKnown RBP25.75■■□□□ 1.71
HLA-C-204ENST00000415537 PIGVQ9NUD9 493 aa25.75■■□□□ 1.71
HLA-C-204ENST00000415537 TMEM51Q9NW97 253 aa25.75■■□□□ 1.71
HLA-C-204ENST00000415537 SLCO3A1Q9UIG8 710 aa25.75■■□□□ 1.71
HLA-C-204ENST00000415537 CACNA1EQ15878 2313 aa25.74■■□□□ 1.71
HLA-C-204ENST00000415537 ITIH6Q6UXX5 1313 aa25.74■■□□□ 1.71
HLA-C-204ENST00000415537 MMEP08473 750 aa25.74■■□□□ 1.71
HLA-C-204ENST00000415537 MZF1P28698 734 aaPredicted RBP25.74■■□□□ 1.71
HLA-C-204ENST00000415537 NUMBP49757 651 aa25.74■■□□□ 1.71
HLA-C-204ENST00000415537 POLR2FP61218 127 aaKnown RBP25.74■■□□□ 1.71
HLA-C-204ENST00000415537 CENPCQ03188 943 aa25.74■■□□□ 1.71
HLA-C-204ENST00000415537 DEUP1Q05D60 604 aa25.74■■□□□ 1.71
HLA-C-204ENST00000415537 ZNF677Q86XU0 584 aa25.74■■□□□ 1.71
HLA-C-204ENST00000415537 XYLT1Q86Y38 959 aa25.74■■□□□ 1.71
HLA-C-204ENST00000415537 MMAAQ8IVH4 418 aaKnown RBP25.74■■□□□ 1.71
HLA-C-204ENST00000415537 EPS8L1Q8TE68 723 aa25.74■■□□□ 1.71
HLA-C-204ENST00000415537 CPA5Q8WXQ8 436 aa25.74■■□□□ 1.71
HLA-C-204ENST00000415537 TKTL2Q9H0I9 626 aa25.74■■□□□ 1.71
HLA-C-204ENST00000415537 GANQ9H2C0 597 aa25.74■■□□□ 1.71
HLA-C-204ENST00000415537 FAM207AQ9NSI2 230 aaPredicted RBP25.74■■□□□ 1.71
HLA-C-204ENST00000415537 FBXL12Q9NXK8 326 aa25.74■■□□□ 1.71
HLA-C-204ENST00000415537 NYNRINQ9P2P1 1898 aaKnown RBP25.74■■□□□ 1.71
HLA-C-204ENST00000415537 GFPT2O94808 682 aa25.73■■□□□ 1.71
HLA-C-204ENST00000415537 STK19P49842 368 aaPredicted RBP25.73■■□□□ 1.71
HLA-C-204ENST00000415537 KLK7P49862 253 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms