RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 RWDD4Q6NW29 188 aaKnown RBP15.99■□□□□ 0.15
SHMT2-202ENST00000414700 EMBQ6PCB8 327 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 C1orf228Q6PIY5 440 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 VSIG1Q86XK7 387 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 UNC45BQ8IWX7 931 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 TP53INP2Q8IXH6 220 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 LEMD2Q8NC56 503 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 ACTL9Q8TC94 416 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.99■□□□□ 0.15
SHMT2-202ENST00000414700 PLD4Q96BZ4 506 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 EPAS1Q99814 870 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 PRMT1Q99873 361 aaKnown RBP15.99■□□□□ 0.15
SHMT2-202ENST00000414700 HINFPQ9BQA5 517 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 CD248Q9HCU0 757 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 MPP6Q9NZW5 540 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 AGO1Q9UL18 857 aaKnown RBP15.99■□□□□ 0.15
SHMT2-202ENST00000414700 HEY1Q9Y5J3 304 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 CCDC189A1A4V9 331 aa15.98■□□□□ 0.15
SHMT2-202ENST00000414700 ZNF487B1APH4 448 aa15.98■□□□□ 0.15
SHMT2-202ENST00000414700 H3BRJ5 948 aa15.98■□□□□ 0.15
SHMT2-202ENST00000414700 TRDMT1O14717 391 aaKnown RBP15.98■□□□□ 0.15
SHMT2-202ENST00000414700 FGF19O95750 216 aa15.98■□□□□ 0.15
SHMT2-202ENST00000414700 LTBRP36941 435 aa15.98■□□□□ 0.15
SHMT2-202ENST00000414700 OTUD4Q01804 1114 aaKnown RBP15.98■□□□□ 0.15
SHMT2-202ENST00000414700 ACTN3Q08043 901 aaPredicted RBP15.98■□□□□ 0.15
SHMT2-202ENST00000414700 WLSQ5T9L3 541 aa15.98■□□□□ 0.15
SHMT2-202ENST00000414700 FBXL22Q6P050 247 aa15.98■□□□□ 0.15
SHMT2-202ENST00000414700 KDM7AQ6ZMT4 941 aa15.98■□□□□ 0.15
SHMT2-202ENST00000414700 GPR149Q86SP6 731 aa15.98■□□□□ 0.15
SHMT2-202ENST00000414700 CAVIN3Q969G5 261 aa15.98■□□□□ 0.15
SHMT2-202ENST00000414700 IGSF8Q969P0 613 aa15.98■□□□□ 0.15
SHMT2-202ENST00000414700 MAGOHBQ96A72 148 aaKnown RBP15.98■□□□□ 0.15
SHMT2-202ENST00000414700 C1orf74Q96LT6 269 aa15.98■□□□□ 0.15
SHMT2-202ENST00000414700 DCLK3Q9C098 648 aa15.98■□□□□ 0.15
SHMT2-202ENST00000414700 TASP1Q9H6P5 420 aa15.98■□□□□ 0.15
SHMT2-202ENST00000414700 C10orf88Q9H8K7 445 aa15.98■□□□□ 0.15
SHMT2-202ENST00000414700 KLC4Q9NSK0 619 aa15.98■□□□□ 0.15
SHMT2-202ENST00000414700 NDFIP2Q9NV92 336 aa15.98■□□□□ 0.15
SHMT2-202ENST00000414700 CLDND1Q9NY35 253 aa15.98■□□□□ 0.15
SHMT2-202ENST00000414700 RCOR3Q9P2K3 495 aaPredicted RBP15.98■□□□□ 0.15
SHMT2-202ENST00000414700 AMACRQ9UHK6 382 aa15.98■□□□□ 0.15
SHMT2-202ENST00000414700 APOC4-APOC2K7ER74 178 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 APOL1O14791 398 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 DCLK1O15075 740 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 DAPK3O43293 454 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 ACSL4O60488 711 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 APOC2P02655 101 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 TNFRSF8P28908 595 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 AVPR1AP37288 418 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 CYP1B1Q16678 543 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 CTC1Q2NKJ3 1217 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 PRPF38BQ5VTL8 546 aaKnown RBP15.97■□□□□ 0.15
SHMT2-202ENST00000414700 CIR1Q86X95 450 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-202ENST00000414700 NPWQ8N729 165 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 ST13P5Q8NFI4 369 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-202ENST00000414700 USP13Q92995 863 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-202ENST00000414700 ARL8AQ96BM9 186 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 MIEF2Q96C03 454 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 LRRC1Q9BTT6 524 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 EPN3Q9H201 632 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 CFAP97Q9P2B7 532 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 SLC12A6Q9UHW9 1150 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 DNPEPQ9ULA0 475 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-202ENST00000414700 GOLGA6L10A0A0M3HER8 536 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 LEFTY2O00292 366 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 MFSD11O43934 449 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 PHF2O75151 1096 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 CNTN5O94779 1100 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 SGSHP51688 502 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 VCPP55072 806 aaKnown RBP15.97■□□□□ 0.15
SHMT2-202ENST00000414700 TFDP2Q14188 446 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 CLUL1Q15846 466 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 ARHGAP15Q53QZ3 475 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 ALFQ53S48 1182 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 Q7L0L9 218 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 CHSY1Q86X52 802 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 P2RY11Q96G91 374 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 SHROOM3Q8TF72 1996 aa15.97■□□□□ 0.15
SHMT2-202ENST00000414700 CCDC188H7C350 402 aa15.96■□□□□ 0.15
SHMT2-202ENST00000414700 ZNF197O14709 1029 aa15.96■□□□□ 0.15
SHMT2-202ENST00000414700 RASSF9O75901 435 aa15.96■□□□□ 0.15
SHMT2-202ENST00000414700 POU3F3P20264 500 aaPredicted RBP15.96■□□□□ 0.15
SHMT2-202ENST00000414700 TACR2P21452 398 aa15.96■□□□□ 0.15
SHMT2-202ENST00000414700 HOXC13P31276 330 aa15.96■□□□□ 0.15
SHMT2-202ENST00000414700 HCAR3P49019 387 aa15.96■□□□□ 0.15
SHMT2-202ENST00000414700 EMC10Q5UCC4 262 aa15.96■□□□□ 0.15
SHMT2-202ENST00000414700 CCDC137Q6PK04 289 aaKnown RBP15.96■□□□□ 0.15
SHMT2-202ENST00000414700 ZC3H18Q86VM9 953 aaKnown RBP15.96■□□□□ 0.15
SHMT2-202ENST00000414700 ARID3BQ8IVW6 561 aaPredicted RBP15.96■□□□□ 0.15
SHMT2-202ENST00000414700 CFAP52Q8N1V2 620 aa15.96■□□□□ 0.15
SHMT2-202ENST00000414700 SH3RF2Q8TEC5 729 aa15.96■□□□□ 0.15
SHMT2-202ENST00000414700 P3H4Q92791 437 aa15.96■□□□□ 0.15
SHMT2-202ENST00000414700 N4BP2L2Q92802 583 aaPredicted RBP15.96■□□□□ 0.15
SHMT2-202ENST00000414700 PRICKLE1Q96MT3 831 aaPredicted RBP15.96■□□□□ 0.15
SHMT2-202ENST00000414700 LRRC19Q9H756 370 aa15.96■□□□□ 0.15
SHMT2-202ENST00000414700 DTLQ9NZJ0 730 aa15.96■□□□□ 0.15
SHMT2-202ENST00000414700 ARHGAP26Q9UNA1 814 aa15.96■□□□□ 0.15
SHMT2-202ENST00000414700 NUP210Q8TEM1 1887 aaPredicted RBP15.96■□□□□ 0.15
SHMT2-202ENST00000414700 SRRM3A6NNA2 597 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms