RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 SFR1Q86XK3 245 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.66□□□□□ -0.861e-6■□□□□ 9.2
SNHG3-201ENST00000413987 ABRAQ8N0Z2 381 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 FAM81AQ8TBF8 368 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 ZDHHC16Q969W1 377 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 TMEM41AQ96HV5 264 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 ZCWPW1Q9H0M4 648 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 ZDHHC18Q9NUE0 388 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.66□□□□□ -0.86
SNHG3-201ENST00000413987 PPP1R14DQ9NXH3 145 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 IL20Q9NYY1 176 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 NDOR1Q9UHB4 597 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 SEPT9Q9UHD8 586 aaPredicted RBP9.66□□□□□ -0.86
SNHG3-201ENST00000413987 INVSQ9Y283 1065 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 NFASCO94856 1347 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 ARHGEF35A5YM69 484 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 SLC15A5A6NIM6 579 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 TRIM16O95361 564 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 SHBGP04278 402 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 S100A6P06703 90 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 SUPT20HL2P0C7V6 817 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 ZNF286BP0CG31 522 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 SMPD1P17405 629 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 RAD23BP54727 409 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 PSMC5P62195 406 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 DR1Q01658 176 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 PRKCZQ05513 592 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 CUL2Q13617 745 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 MXD4Q14582 209 aaPredicted RBP9.66□□□□□ -0.86
SNHG3-201ENST00000413987 SUZ12Q15022 739 aaKnown RBP9.66□□□□□ -0.86
SNHG3-201ENST00000413987 STK11Q15831 433 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 KBTBD12Q3ZCT8 623 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 XKR9Q5GH70 373 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 HERC4Q5GLZ8 1057 aaPredicted RBP9.66□□□□□ -0.86
SNHG3-201ENST00000413987 WASHC2DQ5SRD0 308 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 CELF3Q5SZQ8 465 aaKnown RBP9.66□□□□□ -0.86
SNHG3-201ENST00000413987 C1orf186Q6ZWK4 172 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 VPS36Q86VN1 386 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 NELFCDQ8IXH7 590 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 KIF2BQ8N4N8 673 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 ENDOVQ8N8Q3 282 aaKnown RBP9.66□□□□□ -0.86
SNHG3-201ENST00000413987 B4GALNT2Q8NHY0 566 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 ATP8B4Q8TF62 1192 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 NACC1Q96RE7 527 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 GPR20Q99678 358 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 PACSIN1Q9BY11 444 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 RNF39Q9H2S5 420 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 SUV39H2Q9H5I1 410 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 TMEM165Q9HC07 324 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 CYP4F12Q9HCS2 524 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 RNF186Q9NXI6 227 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 AKAP7Q9P0M2 348 aaPredicted RBP9.66□□□□□ -0.86
SNHG3-201ENST00000413987 AMFRQ9UKV5 643 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 STXBP5LQ9Y2K9 1186 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 TRAV20A0A0B4J274 112 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 hCG_1807616A0A1W2PRN6 198 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 ZNF891A8MT65 544 aaPredicted RBP9.65□□□□□ -0.86
SNHG3-201ENST00000413987 A8MUI8 341 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 NOP56O00567 594 aaKnown RBP9.65□□□□□ -0.86
SNHG3-201ENST00000413987 RASGRF2O14827 1237 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 CETN3O15182 167 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 STBD1O95210 358 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 FGFR1P11362 822 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 SFNP31947 248 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 CASP6P55212 293 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 BFSP1Q12934 665 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 TTLL4Q14679 1199 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 HSF5Q4G112 596 aaPredicted RBP9.65□□□□□ -0.86
SNHG3-201ENST00000413987 SH2D4BQ5SQS7 431 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 JMJD6Q6NYC1 403 aaPredicted RBP9.65□□□□□ -0.86
SNHG3-201ENST00000413987 TMEM154Q6P9G4 183 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 TXNDC11Q6PKC3 985 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 METTL7BQ6UX53 244 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 CPOQ8IVL8 374 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 DAW1Q8N136 415 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 VWA5B2Q8N398 1253 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 CAMKK1Q8N5S9 505 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 DIO2Q92813 273 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 INPP5DQ92835 1189 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 PTP4A1Q93096 173 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 KIFC3Q9BVG8 833 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 ACPTQ9BZG2 426 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 EPB41L4BQ9H329 900 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 ZNF302Q9NR11 478 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 RXFP3Q9NSD7 469 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 COQ3Q9NZJ6 369 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 AGO2Q9UKV8 859 aaKnown RBP9.65□□□□□ -0.86
SNHG3-201ENST00000413987 DTNAQ9Y4J8 743 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 SESN1Q9Y6P5 492 aa9.65□□□□□ -0.86
SNHG3-201ENST00000413987 A0A1W2PQU0 124 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 ARHGAP10A1A4S6 786 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 TCP11X1B4DZS4 312 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 PODXLO00592 558 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 FFAR2O15552 330 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 MGAMO43451 1857 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 ERAL1O75616 437 aaKnown RBP9.64□□□□□ -0.87
SNHG3-201ENST00000413987 TUSC2O75896 110 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 TPBGLP0DKB5 382 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 ITGA4P13612 1032 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 ELNP15502 786 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms