RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 RAB6CQ9H0N0 254 aa27.16■■□□□ 1.94
VEGFA-207ENST00000413642 WDCPQ9H6R7 721 aa27.16■■□□□ 1.94
VEGFA-207ENST00000413642 FSCN3Q9NQT6 498 aa27.16■■□□□ 1.94
VEGFA-207ENST00000413642 METTL5Q9NRN9 209 aaKnown RBP27.16■■□□□ 1.94
VEGFA-207ENST00000413642 ARHGEF38Q9NXL2 777 aa27.16■■□□□ 1.94
VEGFA-207ENST00000413642 RRN3Q9NYV6 651 aa27.16■■□□□ 1.94
VEGFA-207ENST00000413642 ERVW-1Q9UQF0 538 aa27.16■■□□□ 1.94
VEGFA-207ENST00000413642 THADAQ6YHU6 1953 aa27.15■■□□□ 1.94
VEGFA-207ENST00000413642 DCHS1Q96JQ0 3298 aa27.15■■□□□ 1.94
VEGFA-207ENST00000413642 NDUFS2O75306 463 aa27.15■■□□□ 1.94
VEGFA-207ENST00000413642 MMP8P22894 467 aa27.15■■□□□ 1.94
VEGFA-207ENST00000413642 LIMK1P53667 647 aa27.15■■□□□ 1.94
VEGFA-207ENST00000413642 SLC25A52Q3SY17 297 aa27.15■■□□□ 1.94
VEGFA-207ENST00000413642 TRIM61Q5EBN2 209 aa27.15■■□□□ 1.94
VEGFA-207ENST00000413642 RABGAP1LQ5R372 815 aa27.15■■□□□ 1.94
VEGFA-207ENST00000413642 CXorf57Q6NSI4 855 aaKnown RBP27.15■■□□□ 1.94
VEGFA-207ENST00000413642 FAM124AQ86V42 546 aa27.15■■□□□ 1.94
VEGFA-207ENST00000413642 MSANTD4Q8NCY6 345 aa27.15■■□□□ 1.94
VEGFA-207ENST00000413642 GPR174Q9BXC1 333 aa27.15■■□□□ 1.94
VEGFA-207ENST00000413642 RTN4Q9NQC3 1192 aaKnown RBP27.15■■□□□ 1.94
VEGFA-207ENST00000413642 SLCO3A1Q9UIG8 710 aa27.15■■□□□ 1.94
VEGFA-207ENST00000413642 MUC22E2RYF6 1773 aaPredicted RBP27.14■■□□□ 1.94
VEGFA-207ENST00000413642 TTC34A8MYJ7 566 aa27.14■■□□□ 1.94
VEGFA-207ENST00000413642 ASLP04424 464 aa27.14■■□□□ 1.94
VEGFA-207ENST00000413642 UNGP13051 313 aaPredicted RBP27.14■■□□□ 1.94
VEGFA-207ENST00000413642 MAOBP27338 520 aa27.14■■□□□ 1.94
VEGFA-207ENST00000413642 ZNF165P49910 485 aa27.14■■□□□ 1.94
VEGFA-207ENST00000413642 RPS14P62263 151 aaKnown RBP27.14■■□□□ 1.94
VEGFA-207ENST00000413642 PGAP3Q96FM1 320 aaPredicted RBP27.14■■□□□ 1.94
VEGFA-207ENST00000413642 ZNF419Q96HQ0 510 aaPredicted RBP27.14■■□□□ 1.94
VEGFA-207ENST00000413642 RPL10LQ96L21 214 aaKnown RBP27.14■■□□□ 1.94
VEGFA-207ENST00000413642 SUN2Q9UH99 717 aa27.14■■□□□ 1.94
VEGFA-207ENST00000413642 RALGAPA1Q6GYQ0 2036 aa27.13■■□□□ 1.93
VEGFA-207ENST00000413642 A0A1B0GVM2 712 aa27.13■■□□□ 1.93
VEGFA-207ENST00000413642 SYCE3A1L190 88 aa27.13■■□□□ 1.93
VEGFA-207ENST00000413642 TCAF2A6NFQ2 919 aa27.13■■□□□ 1.93
VEGFA-207ENST00000413642 C4orf47A7E2U8 309 aa27.13■■□□□ 1.93
VEGFA-207ENST00000413642 SMTNL1A8MU46 457 aa27.13■■□□□ 1.93
VEGFA-207ENST00000413642 CNTN5O94779 1100 aa27.13■■□□□ 1.93
VEGFA-207ENST00000413642 ACADMP11310 421 aa27.13■■□□□ 1.93
VEGFA-207ENST00000413642 ST8SIA6P61647 398 aa27.13■■□□□ 1.93
VEGFA-207ENST00000413642 PTP4A2Q12974 167 aa27.13■■□□□ 1.93
VEGFA-207ENST00000413642 BRMS1LQ5PSV4 323 aa27.13■■□□□ 1.93
VEGFA-207ENST00000413642 JOSD2Q8TAC2 188 aa27.13■■□□□ 1.93
VEGFA-207ENST00000413642 TM4SF5O14894 197 aa27.12■■□□□ 1.93
VEGFA-207ENST00000413642 SIN3BO75182 1162 aa27.12■■□□□ 1.93
VEGFA-207ENST00000413642 MOCS3O95396 460 aa27.12■■□□□ 1.93
VEGFA-207ENST00000413642 STK19P49842 368 aaPredicted RBP27.12■■□□□ 1.93
VEGFA-207ENST00000413642 ECT2LQ008S8 904 aa27.12■■□□□ 1.93
VEGFA-207ENST00000413642 IQCB1Q15051 598 aa27.12■■□□□ 1.93
VEGFA-207ENST00000413642 CLEC16AQ2KHT3 1053 aa27.12■■□□□ 1.93
VEGFA-207ENST00000413642 HNRNPA1L2Q32P51 320 aaKnown RBP27.12■■□□□ 1.93
VEGFA-207ENST00000413642 TTC39BQ5VTQ0 682 aaPredicted RBP27.12■■□□□ 1.93
VEGFA-207ENST00000413642 PEAR1Q5VY43 1037 aaPredicted RBP27.12■■□□□ 1.93
VEGFA-207ENST00000413642 IL31Q6EBC2 164 aa27.12■■□□□ 1.93
VEGFA-207ENST00000413642 TRIM72Q6ZMU5 477 aa27.12■■□□□ 1.93
VEGFA-207ENST00000413642 SND1Q7KZF4 910 aaKnown RBP eCLIP27.12■■□□□ 1.934e-9■■□□□ 11.7
VEGFA-207ENST00000413642 BNIPLQ7Z465 357 aa27.12■■□□□ 1.93
VEGFA-207ENST00000413642 ZNF683Q8IZ20 524 aa27.12■■□□□ 1.93
VEGFA-207ENST00000413642 NAP1L5Q96NT1 182 aaPredicted RBP27.12■■□□□ 1.93
VEGFA-207ENST00000413642 EVLQ9UI08 416 aaPredicted RBP27.12■■□□□ 1.93
VEGFA-207ENST00000413642 F9P00740 461 aa27.11■■□□□ 1.93
VEGFA-207ENST00000413642 IGLV3-19P01714 112 aa27.11■■□□□ 1.93
VEGFA-207ENST00000413642 CFIP05156 583 aa27.11■■□□□ 1.93
VEGFA-207ENST00000413642 ATP11AP98196 1134 aa27.11■■□□□ 1.93
VEGFA-207ENST00000413642 KLHL40Q2TBA0 621 aa27.11■■□□□ 1.93
VEGFA-207ENST00000413642 C5orf22Q49AR2 442 aa27.11■■□□□ 1.93
VEGFA-207ENST00000413642 ALFQ53S48 1182 aa27.11■■□□□ 1.93
VEGFA-207ENST00000413642 SH3PXD2AQ5TCZ1 1133 aa27.11■■□□□ 1.93
VEGFA-207ENST00000413642 FAM131BQ86XD5 332 aa27.11■■□□□ 1.93
VEGFA-207ENST00000413642 RXFP2Q8WXD0 754 aa27.11■■□□□ 1.93
VEGFA-207ENST00000413642 ALG14Q96F25 216 aa27.11■■□□□ 1.93
VEGFA-207ENST00000413642 AGPAT1Q99943 283 aa27.11■■□□□ 1.93
VEGFA-207ENST00000413642 SEPT11Q9NVA2 429 aaKnown RBP27.11■■□□□ 1.93
VEGFA-207ENST00000413642 PLXND1Q9Y4D7 1925 aa27.1■■□□□ 1.93
VEGFA-207ENST00000413642 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP27.1■■□□□ 1.93
VEGFA-207ENST00000413642 CDX4O14627 284 aaPredicted RBP27.1■■□□□ 1.93
VEGFA-207ENST00000413642 FOXK2Q01167 660 aa27.1■■□□□ 1.93
VEGFA-207ENST00000413642 ZNF177Q13360 481 aaPredicted RBP27.1■■□□□ 1.93
VEGFA-207ENST00000413642 C15orf59Q2T9L4 293 aaPredicted RBP27.1■■□□□ 1.93
VEGFA-207ENST00000413642 ARTNQ5T4W7 220 aa27.1■■□□□ 1.93
VEGFA-207ENST00000413642 C9orf64Q5T6V5 341 aa27.1■■□□□ 1.93
VEGFA-207ENST00000413642 RGL4Q8IZJ4 473 aa27.1■■□□□ 1.93
VEGFA-207ENST00000413642 SRPRAP08240 638 aaKnown RBP27.09■■□□□ 1.93
VEGFA-207ENST00000413642 KCNA4P22459 653 aa27.09■■□□□ 1.93
VEGFA-207ENST00000413642 OXTRP30559 389 aa27.09■■□□□ 1.93
VEGFA-207ENST00000413642 ACSL1P33121 698 aa27.09■■□□□ 1.93
VEGFA-207ENST00000413642 RDXP35241 583 aaKnown RBP27.09■■□□□ 1.93
VEGFA-207ENST00000413642 NSFP46459 744 aaKnown RBP27.09■■□□□ 1.93
VEGFA-207ENST00000413642 PLK1P53350 603 aa27.09■■□□□ 1.93
VEGFA-207ENST00000413642 MTA1Q13330 715 aa27.09■■□□□ 1.93
VEGFA-207ENST00000413642 CCDC14Q49A88 953 aa27.09■■□□□ 1.93
VEGFA-207ENST00000413642 SLC23A3Q6PIS1 610 aa27.09■■□□□ 1.93
VEGFA-207ENST00000413642 ARCQ7LC44 396 aa27.09■■□□□ 1.93
VEGFA-207ENST00000413642 BAP1Q92560 729 aa27.09■■□□□ 1.93
VEGFA-207ENST00000413642 FEM1AQ9BSK4 669 aa27.09■■□□□ 1.93
VEGFA-207ENST00000413642 NUP58Q9BVL2 599 aa27.09■■□□□ 1.93
VEGFA-207ENST00000413642 RSPH9Q9H1X1 276 aaPredicted RBP27.09■■□□□ 1.93
VEGFA-207ENST00000413642 MPP6Q9NZW5 540 aa27.09■■□□□ 1.93
VEGFA-207ENST00000413642 ADAM22Q9P0K1 906 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms