RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 LMNB2Q03252 620 aa15.28■□□□□ 0.04
LIMS4-201ENST00000413601 CAMK2GQ13555 558 aaPredicted RBP15.28■□□□□ 0.04
LIMS4-201ENST00000413601 CDO1Q16878 200 aa15.28■□□□□ 0.04
LIMS4-201ENST00000413601 RSPO4Q2I0M5 234 aaPredicted RBP15.28■□□□□ 0.04
LIMS4-201ENST00000413601 C15orf59Q2T9L4 293 aaPredicted RBP15.28■□□□□ 0.04
LIMS4-201ENST00000413601 RAB6CQ53S08 254 aa15.28■□□□□ 0.04
LIMS4-201ENST00000413601 PLA2G2CQ5R387 149 aa15.28■□□□□ 0.04
LIMS4-201ENST00000413601 TTC39BQ5VTQ0 682 aaPredicted RBP15.28■□□□□ 0.04
LIMS4-201ENST00000413601 MON1BQ7L1V2 547 aa15.28■□□□□ 0.04
LIMS4-201ENST00000413601 ARMCX6Q7L4S7 300 aa15.28■□□□□ 0.04
LIMS4-201ENST00000413601 LPCAT2Q7L5N7 544 aa15.28■□□□□ 0.04
LIMS4-201ENST00000413601 BNIPLQ7Z465 357 aa15.28■□□□□ 0.04
LIMS4-201ENST00000413601 FAM131BQ86XD5 332 aa15.28■□□□□ 0.04
LIMS4-201ENST00000413601 CACUL1Q86Y37 369 aa15.28■□□□□ 0.04
LIMS4-201ENST00000413601 RXFP2Q8WXD0 754 aa15.28■□□□□ 0.04
LIMS4-201ENST00000413601 RMDN1Q96DB5 314 aa15.28■□□□□ 0.04
LIMS4-201ENST00000413601 SIPA1Q96FS4 1042 aa15.28■□□□□ 0.04
LIMS4-201ENST00000413601 MYO19Q96H55 970 aa15.28■□□□□ 0.04
LIMS4-201ENST00000413601 RAB6CQ9H0N0 254 aa15.28■□□□□ 0.04
LIMS4-201ENST00000413601 MTG2Q9H4K7 406 aa15.28■□□□□ 0.04
LIMS4-201ENST00000413601 ERVW-1Q9UQF0 538 aa15.28■□□□□ 0.04
LIMS4-201ENST00000413601 PAXBP1Q9Y5B6 917 aa15.28■□□□□ 0.04
LIMS4-201ENST00000413601 C2CD4BA6NLJ0 364 aa15.27■□□□□ 0.04
LIMS4-201ENST00000413601 ENDOD1O94919 500 aa15.27■□□□□ 0.04
LIMS4-201ENST00000413601 ASLP04424 464 aa15.27■□□□□ 0.04
LIMS4-201ENST00000413601 KRT3P12035 628 aa15.27■□□□□ 0.04
LIMS4-201ENST00000413601 TNFAIP3P21580 790 aa15.27■□□□□ 0.04
LIMS4-201ENST00000413601 MZF1P28698 734 aaPredicted RBP15.27■□□□□ 0.04
LIMS4-201ENST00000413601 SDC4P31431 198 aa15.27■□□□□ 0.04
LIMS4-201ENST00000413601 RDXP35241 583 aaKnown RBP15.27■□□□□ 0.04
LIMS4-201ENST00000413601 PTGER3P43115 390 aa15.27■□□□□ 0.04
LIMS4-201ENST00000413601 UBASH3AP57075 661 aa15.27■□□□□ 0.04
LIMS4-201ENST00000413601 ST8SIA6P61647 398 aa15.27■□□□□ 0.04
LIMS4-201ENST00000413601 ASIC2Q16515 512 aa15.27■□□□□ 0.04
LIMS4-201ENST00000413601 PLEKHG6Q3KR16 790 aa15.27■□□□□ 0.04
LIMS4-201ENST00000413601 CCDC14Q49A88 953 aa15.27■□□□□ 0.04
LIMS4-201ENST00000413601 C5orf22Q49AR2 442 aa15.27■□□□□ 0.04
LIMS4-201ENST00000413601 SH3PXD2AQ5TCZ1 1133 aa15.27■□□□□ 0.04
LIMS4-201ENST00000413601 SFMBT2Q5VUG0 894 aa15.27■□□□□ 0.04
LIMS4-201ENST00000413601 CXorf57Q6NSI4 855 aaKnown RBP15.27■□□□□ 0.04
LIMS4-201ENST00000413601 SLC36A4Q6YBV0 504 aa15.27■□□□□ 0.04
LIMS4-201ENST00000413601 CYP2U1Q7Z449 544 aa15.27■□□□□ 0.04
LIMS4-201ENST00000413601 OR2T3Q8NH03 318 aa15.27■□□□□ 0.04
LIMS4-201ENST00000413601 PRCCQ92733 491 aaPredicted RBP15.27■□□□□ 0.04
LIMS4-201ENST00000413601 MRGPRX3Q96LB0 322 aa15.27■□□□□ 0.04
LIMS4-201ENST00000413601 SYT11Q9BT88 431 aa15.27■□□□□ 0.04
LIMS4-201ENST00000413601 SELENOOQ9BVL4 669 aa15.27■□□□□ 0.04
LIMS4-201ENST00000413601 TTYH3Q9C0H2 523 aa15.27■□□□□ 0.04
LIMS4-201ENST00000413601 PRSS16Q9NQE7 514 aa15.27■□□□□ 0.04
LIMS4-201ENST00000413601 VPS45Q9NRW7 570 aa15.27■□□□□ 0.04
LIMS4-201ENST00000413601 AIPL1Q9NZN9 384 aa15.27■□□□□ 0.04
LIMS4-201ENST00000413601 DMXL1Q9Y485 3027 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 SPTBN4Q9H254 2564 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.26■□□□□ 0.03
LIMS4-201ENST00000413601 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.26■□□□□ 0.03
LIMS4-201ENST00000413601 PRR5-ARHGAP8B1AHC4 643 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 AP5Z1O43299 807 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 GDF9O60383 454 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 CNTN5O94779 1100 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 RFC1P35251 1148 aaPredicted RBP15.26■□□□□ 0.03
LIMS4-201ENST00000413601 TPMTP51580 245 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 GSCP56915 257 aaPredicted RBP15.26■□□□□ 0.03
LIMS4-201ENST00000413601 ARHGAP8P85298 464 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 ECT2LQ008S8 904 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 ZNF177Q13360 481 aaPredicted RBP15.26■□□□□ 0.03
LIMS4-201ENST00000413601 SLC12A1Q13621 1099 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 ALFQ53S48 1182 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 E4F1Q66K89 784 aaPredicted RBP15.26■□□□□ 0.03
LIMS4-201ENST00000413601 TCEAL6Q6IPX3 200 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 ACAD10Q6JQN1 1059 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 WDR59Q6PJI9 974 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 LRRC31Q6UY01 552 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 METTL3Q86U44 580 aaKnown RBP15.26■□□□□ 0.03
LIMS4-201ENST00000413601 ZNF683Q8IZ20 524 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 C12orf50Q8NA57 414 aaPredicted RBP15.26■□□□□ 0.03
LIMS4-201ENST00000413601 C3orf20Q8ND61 904 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 OR52K2Q8NGK3 314 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 PIGKQ92643 395 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 TCEAL3Q969E4 200 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 RPL10LQ96L21 214 aaKnown RBP15.26■□□□□ 0.03
LIMS4-201ENST00000413601 C1orf74Q96LT6 269 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 HAUS4Q9H6D7 363 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 ITM2CQ9NQX7 267 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 RXFP3Q9NSD7 469 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 TMEM51Q9NW97 253 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 TAS2R14Q9NYV8 317 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 USP36Q9P275 1121 aaKnown RBP15.26■□□□□ 0.03
LIMS4-201ENST00000413601 SUN2Q9UH99 717 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 SLCO3A1Q9UIG8 710 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 GON4LQ3T8J9 2241 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 NUMA1Q14980 2115 aa15.26■□□□□ 0.03
LIMS4-201ENST00000413601 TCRBV5S1A1TA0A578 114 aa15.25■□□□□ 0.03
LIMS4-201ENST00000413601 SIGLEC16A6NMB1 481 aa15.25■□□□□ 0.03
LIMS4-201ENST00000413601 TMCO5BA8MYB1 307 aa15.25■□□□□ 0.03
LIMS4-201ENST00000413601 TTC34A8MYJ7 566 aa15.25■□□□□ 0.03
LIMS4-201ENST00000413601 SRGAP2O75044 1071 aa15.25■□□□□ 0.03
LIMS4-201ENST00000413601 NDUFS2O75306 463 aa15.25■□□□□ 0.03
LIMS4-201ENST00000413601 CLDN11O75508 207 aa15.25■□□□□ 0.03
LIMS4-201ENST00000413601 SRPRAP08240 638 aaKnown RBP15.25■□□□□ 0.03
LIMS4-201ENST00000413601 ACADMP11310 421 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms