RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 LHX6Q9UPM6 363 aa17.69■□□□□ 0.42
PTPRC-206ENST00000413409 ASH1LQ9NR48 2969 aaKnown RBP17.68■□□□□ 0.42
PTPRC-206ENST00000413409 GREB1Q4ZG55 1949 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 LOC400499M0QZD8 3231 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 SMAPO00193 183 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 PIK3R2O00459 728 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 GIPC1O14908 333 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 MCF2LO15068 1137 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 AXIN1O15169 862 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 CD48P09326 243 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 ZNF806P0C7X5 589 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 CHRNB1P11230 501 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 PTPN1P18031 435 aaKnown RBP17.68■□□□□ 0.42
PTPRC-206ENST00000413409 FCARP24071 287 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 HOXA9P31269 272 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 CNR2P34972 360 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 RDXP35241 583 aaKnown RBP17.68■□□□□ 0.42
PTPRC-206ENST00000413409 CHKAP35790 457 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 VPS41P49754 854 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 CDH6P55285 790 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 GRM2Q14416 872 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 SLC29A2Q14542 456 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 NOMO1Q15155 1222 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 SLC5A9Q2M3M2 681 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 P3H1Q32P28 736 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 PABPC1LQ4VXU2 614 aaKnown RBP17.68■□□□□ 0.42
PTPRC-206ENST00000413409 EFHC1Q5JVL4 640 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 WSCD1Q658N2 575 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 STRADAQ7RTN6 431 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 PCGF5Q86SE9 256 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 LONP2Q86WA8 852 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 CCDC25Q86WR0 208 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 FUKQ8N0W3 1084 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 CFAP57Q96MR6 1250 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 CACNG4Q9UBN1 327 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 ADAM28Q9UKQ2 775 aa17.68■□□□□ 0.42
PTPRC-206ENST00000413409 XYLBO75191 536 aa17.67■□□□□ 0.42
PTPRC-206ENST00000413409 GRAP2O75791 330 aa17.67■□□□□ 0.42
PTPRC-206ENST00000413409 SHBGP04278 402 aa17.67■□□□□ 0.42
PTPRC-206ENST00000413409 COL4A2P08572 1712 aa17.67■□□□□ 0.42
PTPRC-206ENST00000413409 ABHD2P08910 425 aa17.67■□□□□ 0.42
PTPRC-206ENST00000413409 TGM2P21980 687 aa17.67■□□□□ 0.42
PTPRC-206ENST00000413409 CREMQ03060 361 aa17.67■□□□□ 0.42
PTPRC-206ENST00000413409 GRIK3Q13003 919 aa17.67■□□□□ 0.42
PTPRC-206ENST00000413409 KRT81Q14533 505 aa17.67■□□□□ 0.42
PTPRC-206ENST00000413409 TAF5Q15542 800 aa17.67■□□□□ 0.42
PTPRC-206ENST00000413409 C6orf118Q5T5N4 469 aa17.67■□□□□ 0.42
PTPRC-206ENST00000413409 SLC7A14Q8TBB6 771 aa17.67■□□□□ 0.42
PTPRC-206ENST00000413409 FAM3CQ92520 227 aa17.67■□□□□ 0.42
PTPRC-206ENST00000413409 HAUS1Q96CS2 278 aa17.67■□□□□ 0.42
PTPRC-206ENST00000413409 UROC1Q96N76 676 aa17.67■□□□□ 0.42
PTPRC-206ENST00000413409 LPIN3Q9BQK8 851 aa17.67■□□□□ 0.42
PTPRC-206ENST00000413409 SYT15Q9BQS2 421 aa17.67■□□□□ 0.42
PTPRC-206ENST00000413409 SNRNP25Q9BV90 132 aaKnown RBP17.67■□□□□ 0.42
PTPRC-206ENST00000413409 CALN1Q9BXU9 219 aa17.67■□□□□ 0.42
PTPRC-206ENST00000413409 SMOC1Q9H4F8 434 aa17.67■□□□□ 0.42
PTPRC-206ENST00000413409 TPX2Q9ULW0 747 aaKnown RBP17.67■□□□□ 0.42
PTPRC-206ENST00000413409 SGK1O00141 431 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 EIF3HO15372 352 aaKnown RBP eCLIP17.66■□□□□ 0.42
PTPRC-206ENST00000413409 TCEA3O75764 348 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 FBXO21O94952 628 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 ZIC2O95409 532 aaPredicted RBP17.66■□□□□ 0.42
PTPRC-206ENST00000413409 TTC4O95801 387 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 AGTP01019 485 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 FAM200BP0CF97 657 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 HDAC4P56524 1084 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 PPP2R2AP63151 447 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 DYNLT1P63172 113 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 GNGT1P63211 74 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 GPS1Q13098 491 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 DPYSL2Q16555 572 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 CDO1Q16878 200 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 RNASEH2BQ5TBB1 312 aaKnown RBP17.66■□□□□ 0.42
PTPRC-206ENST00000413409 SH3PXD2AQ5TCZ1 1133 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 CEP68Q76N32 757 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 PIGZQ86VD9 579 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 PSTKQ8IV42 348 aaKnown RBP17.66■□□□□ 0.42
PTPRC-206ENST00000413409 SCUBE3Q8IX30 993 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 SPEM1Q8N4L4 309 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 GATA6Q92908 595 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 ELSPBP1Q96BH3 223 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 TTC25Q96NG3 672 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 RNF157Q96PX1 679 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 PAAF1Q9BRP4 392 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 MAK16Q9BXY0 300 aaKnown RBP17.66■□□□□ 0.42
PTPRC-206ENST00000413409 B3GNT5Q9BYG0 378 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 CENPHQ9H3R5 247 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 CNOT10Q9H9A5 744 aaKnown RBP17.66■□□□□ 0.42
PTPRC-206ENST00000413409 PRDM16Q9HAZ2 1276 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 PCDH18Q9HCL0 1135 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 DDX43Q9NXZ2 648 aaKnown RBP17.66■□□□□ 0.42
PTPRC-206ENST00000413409 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.66■□□□□ 0.42
PTPRC-206ENST00000413409 GDE1Q9NZC3 331 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 NINJ2Q9NZG7 142 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 CDH9Q9ULB4 789 aa17.66■□□□□ 0.42
PTPRC-206ENST00000413409 MRPS23Q9Y3D9 190 aaKnown RBP17.66■□□□□ 0.42
PTPRC-206ENST00000413409 IGSF10Q6WRI0 2623 aa17.65■□□□□ 0.42
PTPRC-206ENST00000413409 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.65■□□□□ 0.42
PTPRC-206ENST00000413409 ARHGEF37A1IGU5 675 aa17.65■□□□□ 0.42
PTPRC-206ENST00000413409 CFAP69A5D8W1 941 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms