RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 SRGAP2O75044 1071 aa10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 SIN3BO75182 1162 aa10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 CNTN5O94779 1100 aa10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 LSM8O95777 96 aaKnown RBP10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 STK19P49842 368 aaPredicted RBP10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 ZNF165P49910 485 aa10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 RPS14P62263 151 aaKnown RBP10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 ECT2LQ008S8 904 aa10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 ZNF177Q13360 481 aaPredicted RBP10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 CAMK2GQ13555 558 aaPredicted RBP10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 E2F5Q15329 346 aa10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 CDO1Q16878 200 aa10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 C15orf59Q2T9L4 293 aaPredicted RBP10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 SLC25A52Q3SY17 297 aa10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 SH3PXD2AQ5TCZ1 1133 aa10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 RNF219Q5W0B1 726 aaPredicted RBP10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 SMYD5Q6GMV2 418 aa10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 ZNF677Q86XU0 584 aa10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 MSANTD4Q8NCY6 345 aa10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 OR52K2Q8NGK3 314 aa10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 JOSD2Q8TAC2 188 aa10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 RXFP2Q8WXD0 754 aa10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 MYO19Q96H55 970 aa10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 ERGIC2Q96RQ1 377 aa10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 GTPBP2Q9BX10 602 aaKnown RBP10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 NUSAP1Q9BXS6 441 aaKnown RBP10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 MIR1-1HGQ9H1L0 117 aa10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 USP36Q9P275 1121 aaKnown RBP10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 TMEM59LQ9UK28 342 aa10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 PILRBQ9UKJ0 227 aa10.5□□□□□ -0.73
NCKIPSD-202ENST00000413374 FAM47DPA6NHR8 397 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 MEI4A8MW99 385 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 TMCO5BA8MYB1 307 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 CDX4O14627 284 aaPredicted RBP10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 F9P00740 461 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 DNTTP04053 509 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 ASLP04424 464 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 UNGP13051 313 aaPredicted RBP10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 VAV1P15498 845 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 MMP8P22894 467 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 ACSL1P33121 698 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 CXCR3P49682 368 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 CLEC16AQ2KHT3 1053 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 PLEKHG6Q3KR16 790 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 ACCSLQ4AC99 568 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 ALFQ53S48 1182 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 PPM1JQ5JR12 505 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 SPDYCQ5MJ68 293 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 DCAF12L1Q5VU92 463 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 METTL3Q86U44 580 aaKnown RBP10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 FAM131BQ86XD5 332 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 DNAAF5Q86Y56 855 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 ZNF557Q8N988 423 aaPredicted RBP10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 OR2I1PQ8NGU4 316 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 NT5C3BQ969T7 300 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 ZNF419Q96HQ0 510 aaPredicted RBP10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 NAP1L5Q96NT1 182 aaPredicted RBP10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 AGPAT1Q99943 283 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 NUP58Q9BVL2 599 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 MAGEB5Q9BZ81 275 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 RTN4Q9NQC3 1192 aaKnown RBP10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 ARHGEF38Q9NXL2 777 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 RRN3Q9NYV6 651 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 MPP6Q9NZW5 540 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 ADAM22Q9P0K1 906 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 GVINP1Q7Z2Y8 2422 aa10.49□□□□□ -0.73
NCKIPSD-202ENST00000413374 A0A1B0GVM2 712 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 TCAF2A6NFQ2 919 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 BNIP3LO60238 219 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 SERPINC1P01008 464 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 ENGP17813 658 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 TNFAIP3P21580 790 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 OXTRP30559 389 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 RDXP35241 583 aaKnown RBP10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 NSFP46459 744 aaKnown RBP10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 ATXN3P54252 364 aaPredicted RBP10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 PTP4A2Q12974 167 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 IQCB1Q15051 598 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 DUOXA1Q1HG43 343 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 HNRNPA1L2Q32P51 320 aaKnown RBP10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 CCDC14Q49A88 953 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 FILIP1LQ4L180 1135 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 BRMS1LQ5PSV4 323 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 SYCP2LQ5T4T6 812 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 C9orf64Q5T6V5 341 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 ZNF776Q68DI1 518 aaPredicted RBP10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 CXorf57Q6NSI4 855 aaKnown RBP10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 TFAP2DQ7Z6R9 452 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 MMAAQ8IVH4 418 aaKnown RBP10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 STK40Q8N2I9 435 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 SNX19Q92543 992 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 FOXJ1Q92949 421 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 PGAP3Q96FM1 320 aaPredicted RBP10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 FAM129BQ96TA1 746 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 BPIFA3Q9BQP9 254 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 FUCA2Q9BTY2 467 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 SELENOOQ9BVL4 669 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 MUC3BQ9H195 1237 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 C6orf106Q9H6K1 298 aaPredicted RBP10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 CBX8Q9HC52 389 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms