RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 ATP6V1DQ9Y5K8 247 aa17.31■□□□□ 0.36
MRPL55-220ENST00000411464 EDDM13A0A1B0GTR0 161 aa17.3■□□□□ 0.36
MRPL55-220ENST00000411464 RFPL3O75679 317 aa17.3■□□□□ 0.36
MRPL55-220ENST00000411464 LUC7L3O95232 432 aaKnown RBP17.3■□□□□ 0.36
MRPL55-220ENST00000411464 WNT1P04628 370 aa17.3■□□□□ 0.36
MRPL55-220ENST00000411464 GOT1P17174 413 aa17.3■□□□□ 0.36
MRPL55-220ENST00000411464 ABCG1P45844 678 aa17.3■□□□□ 0.36
MRPL55-220ENST00000411464 PSMD8P48556 350 aa17.3■□□□□ 0.36
MRPL55-220ENST00000411464 NUCB2P80303 420 aa17.3■□□□□ 0.36
MRPL55-220ENST00000411464 KCNJ12Q14500 433 aa17.3■□□□□ 0.36
MRPL55-220ENST00000411464 FSCBQ5H9T9 825 aa17.3■□□□□ 0.36
MRPL55-220ENST00000411464 MS4A13Q5J8X5 152 aa17.3■□□□□ 0.36
MRPL55-220ENST00000411464 ZNF658Q5TYW1 1059 aaPredicted RBP17.3■□□□□ 0.36
MRPL55-220ENST00000411464 MMS22LQ6ZRQ5 1243 aa17.3■□□□□ 0.36
MRPL55-220ENST00000411464 SND1Q7KZF4 910 aaKnown RBP eCLIP17.3■□□□□ 0.36
MRPL55-220ENST00000411464 CFAP52Q8N1V2 620 aa17.3■□□□□ 0.36
MRPL55-220ENST00000411464 PPM1KQ8N3J5 372 aa17.3■□□□□ 0.36
MRPL55-220ENST00000411464 EID2Q8N6I1 236 aa17.3■□□□□ 0.36
MRPL55-220ENST00000411464 OR14C36Q8NHC7 312 aa17.3■□□□□ 0.36
MRPL55-220ENST00000411464 FAM149B1Q96BN6 582 aa17.3■□□□□ 0.36
MRPL55-220ENST00000411464 SERAC1Q96JX3 654 aa17.3■□□□□ 0.36
MRPL55-220ENST00000411464 NUCKS1Q9H1E3 243 aaKnown RBP17.3■□□□□ 0.36
MRPL55-220ENST00000411464 SLCO3A1Q9UIG8 710 aa17.3■□□□□ 0.36
MRPL55-220ENST00000411464 ZDHHC9Q9Y397 364 aa17.3■□□□□ 0.36
MRPL55-220ENST00000411464 KNL1Q8NG31 2342 aa17.3■□□□□ 0.36
MRPL55-220ENST00000411464 CELSR3Q9NYQ7 3312 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 TBC1D3DA0A087WVF3 549 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 TBC1D3IA0A087WXS9 549 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 TBC1D3EA0A087X179 549 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 TBC1D3KA0A087X1G2 549 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 TBC1D3FA6NER0 549 aaPredicted RBP17.29■□□□□ 0.36
MRPL55-220ENST00000411464 TBC1D3LB9A6J9 549 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 RNF225M0QZC1 329 aaPredicted RBP17.29■□□□□ 0.36
MRPL55-220ENST00000411464 TLR4O00206 839 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 SART1O43290 800 aaKnown RBP17.29■□□□□ 0.36
MRPL55-220ENST00000411464 MOCS2O96007 188 aaPredicted RBP17.29■□□□□ 0.36
MRPL55-220ENST00000411464 ADH1BP00325 375 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 FYNP06241 537 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 TBC1D3HP0C7X1 549 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 C5AR1P21730 350 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 BRD2P25440 801 aaKnown RBP17.29■□□□□ 0.36
MRPL55-220ENST00000411464 NNMTP40261 264 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 CTSOP43234 321 aaPredicted RBP17.29■□□□□ 0.36
MRPL55-220ENST00000411464 FMO5P49326 533 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 LRRC63Q05C16 580 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 CETN1Q12798 172 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 DNAJC3Q13217 504 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 NNTQ13423 1086 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 COBLL1Q53SF7 1204 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 DCAF6Q58WW2 860 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 TBC1D3GQ6DHY5 549 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 TBC1D3CQ6IPX1 549 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 TBC1D3Q8IZP1 549 aaPredicted RBP17.29■□□□□ 0.36
MRPL55-220ENST00000411464 STK40Q8N2I9 435 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 DQX1Q8TE96 717 aaKnown RBP17.29■□□□□ 0.36
MRPL55-220ENST00000411464 MYEOVQ96EZ4 313 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 CRELD1Q96HD1 420 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 GSDMAQ96QA5 445 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 FAM129BQ96TA1 746 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 ZSWIM1Q9BR11 485 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 METTL14Q9HCE5 456 aaKnown RBP17.29■□□□□ 0.36
MRPL55-220ENST00000411464 ST7Q9NRC1 585 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 NAALADL1Q9UQQ1 740 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 AK5Q9Y6K8 562 aa17.29■□□□□ 0.36
MRPL55-220ENST00000411464 URB1O60287 2271 aaKnown RBP17.29■□□□□ 0.36
MRPL55-220ENST00000411464 A0A1W2PR77 199 aa17.28■□□□□ 0.36
MRPL55-220ENST00000411464 CBX4O00257 560 aa17.28■□□□□ 0.36
MRPL55-220ENST00000411464 CAPN9O14815 690 aa17.28■□□□□ 0.36
MRPL55-220ENST00000411464 WNT9AO14904 365 aa17.28■□□□□ 0.36
MRPL55-220ENST00000411464 IL1BP01584 269 aa17.28■□□□□ 0.36
MRPL55-220ENST00000411464 PMS1P54277 932 aaKnown RBP17.28■□□□□ 0.36
MRPL55-220ENST00000411464 ADPRHP54922 357 aa17.28■□□□□ 0.36
MRPL55-220ENST00000411464 SEMG2Q02383 582 aa17.28■□□□□ 0.36
MRPL55-220ENST00000411464 TARDBPQ13148 414 aaKnown RBP eCLIP17.28■□□□□ 0.36
MRPL55-220ENST00000411464 NUMA1Q14980 2115 aa17.28■□□□□ 0.36
MRPL55-220ENST00000411464 SHBQ15464 509 aa17.28■□□□□ 0.36
MRPL55-220ENST00000411464 LRRC69Q6ZNQ3 347 aa17.28■□□□□ 0.36
MRPL55-220ENST00000411464 LGI2Q8N0V4 545 aa17.28■□□□□ 0.36
MRPL55-220ENST00000411464 AADATQ8N5Z0 425 aa17.28■□□□□ 0.36
MRPL55-220ENST00000411464 PIP4K2CQ8TBX8 421 aa17.28■□□□□ 0.36
MRPL55-220ENST00000411464 ADAM32Q8TC27 787 aa17.28■□□□□ 0.36
MRPL55-220ENST00000411464 SLC39A13Q96H72 371 aa17.28■□□□□ 0.36
MRPL55-220ENST00000411464 RPL10LQ96L21 214 aaKnown RBP17.28■□□□□ 0.36
MRPL55-220ENST00000411464 TRIM62Q9BVG3 475 aa17.28■□□□□ 0.36
MRPL55-220ENST00000411464 GTPBP4Q9BZE4 634 aaKnown RBP17.28■□□□□ 0.36
MRPL55-220ENST00000411464 TJP2Q9UDY2 1190 aa17.28■□□□□ 0.36
MRPL55-220ENST00000411464 CABIN1Q9Y6J0 2220 aa17.28■□□□□ 0.36
MRPL55-220ENST00000411464 ITIH6Q6UXX5 1313 aa17.27■□□□□ 0.36
MRPL55-220ENST00000411464 RRP8O43159 456 aaKnown RBP17.27■□□□□ 0.36
MRPL55-220ENST00000411464 SMC2O95347 1197 aa17.27■□□□□ 0.36
MRPL55-220ENST00000411464 APOEP02649 317 aa17.27■□□□□ 0.36
MRPL55-220ENST00000411464 EPHA8P29322 1005 aaPredicted RBP17.27■□□□□ 0.36
MRPL55-220ENST00000411464 NXPH1P58417 271 aa17.27■□□□□ 0.36
MRPL55-220ENST00000411464 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.27■□□□□ 0.36
MRPL55-220ENST00000411464 PRPF39Q86UA1 669 aaKnown RBP17.27■□□□□ 0.36
MRPL55-220ENST00000411464 APCDD1Q8J025 514 aa17.27■□□□□ 0.36
MRPL55-220ENST00000411464 OXR1Q8N573 874 aa17.27■□□□□ 0.36
MRPL55-220ENST00000411464 PTPRN2Q92932 1015 aa17.27■□□□□ 0.36
MRPL55-220ENST00000411464 UBL7Q96S82 380 aaPredicted RBP17.27■□□□□ 0.36
MRPL55-220ENST00000411464 ERVMER34-1Q9H9K5 563 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms