RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 CXorf57Q6NSI4 855 aaKnown RBP32.13■■■□□ 2.73
TRAF3IP1-203ENST00000409739 GAS2L3Q86XJ1 694 aa32.13■■■□□ 2.73
TRAF3IP1-203ENST00000409739 ABCA7Q8IZY2 2146 aa32.13■■■□□ 2.73
TRAF3IP1-203ENST00000409739 HMGB4Q8WW32 186 aa32.13■■■□□ 2.73
TRAF3IP1-203ENST00000409739 GAB3Q8WWW8 586 aa32.13■■■□□ 2.73
TRAF3IP1-203ENST00000409739 ERLEC1Q96DZ1 483 aa32.13■■■□□ 2.73
TRAF3IP1-203ENST00000409739 TRIM5Q9C035 493 aa32.13■■■□□ 2.73
TRAF3IP1-203ENST00000409739 CNOT8Q9UFF9 292 aaKnown RBP32.13■■■□□ 2.73
TRAF3IP1-203ENST00000409739 SDK1Q7Z5N4 2213 aa32.12■■■□□ 2.73
TRAF3IP1-203ENST00000409739 A0A087X0T9 212 aa32.12■■■□□ 2.73
TRAF3IP1-203ENST00000409739 FAM228BP0C875 321 aa32.12■■■□□ 2.73
TRAF3IP1-203ENST00000409739 POLR2EP19388 210 aaKnown RBP32.12■■■□□ 2.73
TRAF3IP1-203ENST00000409739 PRKCHP24723 683 aa32.12■■■□□ 2.73
TRAF3IP1-203ENST00000409739 CSKP41240 450 aa32.12■■■□□ 2.73
TRAF3IP1-203ENST00000409739 ARID5BQ14865 1188 aa32.12■■■□□ 2.73
TRAF3IP1-203ENST00000409739 PTPRNQ16849 979 aa32.12■■■□□ 2.73
TRAF3IP1-203ENST00000409739 OR8K1Q8NGG5 319 aa32.12■■■□□ 2.73
TRAF3IP1-203ENST00000409739 TTC17Q96AE7 1141 aa32.12■■■□□ 2.73
TRAF3IP1-203ENST00000409739 TRIM11Q96F44 468 aa32.12■■■□□ 2.73
TRAF3IP1-203ENST00000409739 CNPY3Q9BT09 278 aa32.12■■■□□ 2.73
TRAF3IP1-203ENST00000409739 BCCIPQ9P287 314 aaKnown RBP eCLIP32.12■■■□□ 2.73
TRAF3IP1-203ENST00000409739 IGLV3-10A0A075B6K4 115 aa32.11■■■□□ 2.73
TRAF3IP1-203ENST00000409739 E9PAM4 449 aa32.11■■■□□ 2.73
TRAF3IP1-203ENST00000409739 MFAP3LO75121 409 aa32.11■■■□□ 2.73
TRAF3IP1-203ENST00000409739 RPP40O75818 363 aaKnown RBP32.11■■■□□ 2.73
TRAF3IP1-203ENST00000409739 ATP5BP06576 529 aaKnown RBP32.11■■■□□ 2.73
TRAF3IP1-203ENST00000409739 TPM1P09493 284 aa32.11■■■□□ 2.73
TRAF3IP1-203ENST00000409739 DLDP09622 509 aaKnown RBP32.11■■■□□ 2.73
TRAF3IP1-203ENST00000409739 MYBL1P10243 752 aa32.11■■■□□ 2.73
TRAF3IP1-203ENST00000409739 GABRG2P18507 467 aa32.11■■■□□ 2.73
TRAF3IP1-203ENST00000409739 HOXD11P31277 338 aaPredicted RBP32.11■■■□□ 2.73
TRAF3IP1-203ENST00000409739 ADRA1BP35368 520 aa32.11■■■□□ 2.73
TRAF3IP1-203ENST00000409739 SIM2Q14190 667 aaPredicted RBP32.11■■■□□ 2.73
TRAF3IP1-203ENST00000409739 ARL13BQ3SXY8 428 aa32.11■■■□□ 2.73
TRAF3IP1-203ENST00000409739 SERPINA13PQ6UXR4 307 aa32.11■■■□□ 2.73
TRAF3IP1-203ENST00000409739 DRC7Q8IY82 874 aa32.11■■■□□ 2.73
TRAF3IP1-203ENST00000409739 CCDC185Q8N715 623 aa32.11■■■□□ 2.73
TRAF3IP1-203ENST00000409739 CLDN11O75508 207 aa32.1■■■□□ 2.73
TRAF3IP1-203ENST00000409739 CNTN5O94779 1100 aa32.1■■■□□ 2.73
TRAF3IP1-203ENST00000409739 CDH4P55283 916 aa32.1■■■□□ 2.73
TRAF3IP1-203ENST00000409739 STARD3Q14849 445 aa32.1■■■□□ 2.73
TRAF3IP1-203ENST00000409739 PLEKHG6Q3KR16 790 aa32.1■■■□□ 2.73
TRAF3IP1-203ENST00000409739 FNDC3BQ53EP0 1204 aaKnown RBP32.1■■■□□ 2.73
TRAF3IP1-203ENST00000409739 ALFQ53S48 1182 aa32.1■■■□□ 2.73
TRAF3IP1-203ENST00000409739 LRRC31Q6UY01 552 aa32.1■■■□□ 2.73
TRAF3IP1-203ENST00000409739 PRR23BQ6ZRT6 265 aa32.1■■■□□ 2.73
TRAF3IP1-203ENST00000409739 TMC6Q7Z403 805 aa32.1■■■□□ 2.73
TRAF3IP1-203ENST00000409739 APCDD1Q8J025 514 aa32.1■■■□□ 2.73
TRAF3IP1-203ENST00000409739 NTAN1Q96AB6 310 aa32.1■■■□□ 2.73
TRAF3IP1-203ENST00000409739 TMEM245Q9H330 911 aa32.1■■■□□ 2.73
TRAF3IP1-203ENST00000409739 PLA2G4CQ9UP65 541 aa32.1■■■□□ 2.73
TRAF3IP1-203ENST00000409739 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP32.09■■■□□ 2.73
TRAF3IP1-203ENST00000409739 DRGXA6NNA5 263 aa32.09■■■□□ 2.73
TRAF3IP1-203ENST00000409739 MOCS3O95396 460 aa32.09■■■□□ 2.73
TRAF3IP1-203ENST00000409739 ZNF177Q13360 481 aaPredicted RBP32.09■■■□□ 2.73
TRAF3IP1-203ENST00000409739 SLC12A1Q13621 1099 aa32.09■■■□□ 2.73
TRAF3IP1-203ENST00000409739 CEP68Q76N32 757 aa32.09■■■□□ 2.73
TRAF3IP1-203ENST00000409739 OR52K2Q8NGK3 314 aa32.09■■■□□ 2.73
TRAF3IP1-203ENST00000409739 ABHD10Q9NUJ1 306 aa32.09■■■□□ 2.73
TRAF3IP1-203ENST00000409739 SCINQ9Y6U3 715 aa32.09■■■□□ 2.73
TRAF3IP1-203ENST00000409739 EP300Q09472 2414 aaPredicted RBP32.09■■■□□ 2.73
TRAF3IP1-203ENST00000409739 NUP205Q92621 2012 aa32.09■■■□□ 2.73
TRAF3IP1-203ENST00000409739 HLA-EP13747 358 aa32.08■■■□□ 2.73
TRAF3IP1-203ENST00000409739 MZF1P28698 734 aaPredicted RBP32.08■■■□□ 2.73
TRAF3IP1-203ENST00000409739 EIF4A3P38919 411 aaKnown RBP32.08■■■□□ 2.73
TRAF3IP1-203ENST00000409739 ZNF252P-AS1Q0IIN9 211 aa32.08■■■□□ 2.73
TRAF3IP1-203ENST00000409739 TBX2Q13207 712 aaPredicted RBP32.08■■■□□ 2.73
TRAF3IP1-203ENST00000409739 LPAL2Q16609 132 aa32.08■■■□□ 2.73
TRAF3IP1-203ENST00000409739 MYO19Q96H55 970 aa32.08■■■□□ 2.73
TRAF3IP1-203ENST00000409739 TRIM7Q9C029 511 aa32.08■■■□□ 2.73
TRAF3IP1-203ENST00000409739 MPP6Q9NZW5 540 aa32.08■■■□□ 2.73
TRAF3IP1-203ENST00000409739 MYO1AQ9UBC5 1043 aa32.08■■■□□ 2.73
TRAF3IP1-203ENST00000409739 NENFQ9UMX5 172 aa32.08■■■□□ 2.73
TRAF3IP1-203ENST00000409739 TBC1D30Q9Y2I9 924 aa32.08■■■□□ 2.73
TRAF3IP1-203ENST00000409739 TMEM191CA6NGB0 347 aa32.07■■■□□ 2.72
TRAF3IP1-203ENST00000409739 SRGAP2O75044 1071 aa32.07■■■□□ 2.72
TRAF3IP1-203ENST00000409739 ASLP04424 464 aa32.07■■■□□ 2.72
TRAF3IP1-203ENST00000409739 NDUFV2P19404 249 aa32.07■■■□□ 2.72
TRAF3IP1-203ENST00000409739 PSMA2P25787 234 aa32.07■■■□□ 2.72
TRAF3IP1-203ENST00000409739 ADKP55263 362 aaKnown RBP32.07■■■□□ 2.72
TRAF3IP1-203ENST00000409739 OXCT1P55809 520 aa32.07■■■□□ 2.72
TRAF3IP1-203ENST00000409739 NRG1Q02297 640 aaPredicted RBP32.07■■■□□ 2.72
TRAF3IP1-203ENST00000409739 SCAPQ12770 1279 aa32.07■■■□□ 2.72
TRAF3IP1-203ENST00000409739 MANEALQ5VSG8 457 aa32.07■■■□□ 2.72
TRAF3IP1-203ENST00000409739 ALKBH5Q6P6C2 394 aaKnown RBP32.07■■■□□ 2.72
TRAF3IP1-203ENST00000409739 PGBD3Q8N328 593 aa32.07■■■□□ 2.72
TRAF3IP1-203ENST00000409739 OSBPL2Q9H1P3 480 aa32.07■■■□□ 2.72
TRAF3IP1-203ENST00000409739 OR12D3Q9UGF7 316 aa32.07■■■□□ 2.72
TRAF3IP1-203ENST00000409739 TNRC6BQ9UPQ9 1833 aaKnown RBP32.07■■■□□ 2.72
TRAF3IP1-203ENST00000409739 EPHX1P07099 455 aa32.06■■■□□ 2.72
TRAF3IP1-203ENST00000409739 DESP17661 470 aa32.06■■■□□ 2.72
TRAF3IP1-203ENST00000409739 CTSOP43234 321 aaPredicted RBP32.06■■■□□ 2.72
TRAF3IP1-203ENST00000409739 NUMBP49757 651 aa32.06■■■□□ 2.72
TRAF3IP1-203ENST00000409739 USP39Q53GS9 565 aaKnown RBP32.06■■■□□ 2.72
TRAF3IP1-203ENST00000409739 TFAP2DQ7Z6R9 452 aa32.06■■■□□ 2.72
TRAF3IP1-203ENST00000409739 ZNF366Q8N895 744 aa32.06■■■□□ 2.72
TRAF3IP1-203ENST00000409739 FNIP1Q8TF40 1166 aa32.06■■■□□ 2.72
TRAF3IP1-203ENST00000409739 ALG14Q96F25 216 aa32.06■■■□□ 2.72
TRAF3IP1-203ENST00000409739 MRGPRX3Q96LB0 322 aa32.06■■■□□ 2.72
TRAF3IP1-203ENST00000409739 MAGEB5Q9BZ81 275 aa32.06■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms