RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 PTPRJQ12913 1337 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 A0A0A6YYK5 440 aaPredicted RBP8.57□□□□□ -1.04
SCN9A-203ENST00000409672 KPNA6O60684 536 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 LRATO95237 230 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 KRT16P08779 473 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 GABRR2P28476 465 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 MAXP61244 160 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 KCT2Q8NC54 265 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 PHF20Q9BVI0 1012 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 TMEM120AQ9BXJ8 343 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 COG5Q9UP83 839 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 VDRP11473 427 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 RNASE12Q5GAN4 147 aaKnown RBP8.57□□□□□ -1.04
SCN9A-203ENST00000409672 HDDC3Q8N4P3 179 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 NAXEQ8NCW5 288 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 CYP2W1Q8TAV3 490 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 ATP6V1G3Q96LB4 118 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 DHRS1Q96LJ7 313 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 RBM12Q9NTZ6 932 aaKnown RBP8.57□□□□□ -1.04
SCN9A-203ENST00000409672 CLIC5Q9NZA1 410 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 TMEM120BA0PK00 339 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 RAD51BO15315 384 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 FAM20BO75063 409 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 DEAF1O75398 565 aaPredicted RBP8.57□□□□□ -1.04
SCN9A-203ENST00000409672 METTL21CQ5VZV1 264 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 WSCD1Q658N2 575 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 CYP4Z2PQ8N1L4 340 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 CDK5RAP1Q96SZ6 601 aaKnown RBP8.57□□□□□ -1.04
SCN9A-203ENST00000409672 NEK6Q9HC98 313 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 MID1IP1Q9NPA3 183 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 MARCH2Q9P0N8 246 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 ARHGEF12Q9NZN5 1544 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 HOXC12P31275 282 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 ATP5C1P36542 298 aaKnown RBP8.57□□□□□ -1.04
SCN9A-203ENST00000409672 CD86P42081 329 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 SERPINB8P50452 374 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 POLR2LP62875 67 aaKnown RBP8.57□□□□□ -1.04
SCN9A-203ENST00000409672 PDIA5Q14554 519 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 GFOD2Q3B7J2 385 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 TCHHL1Q5QJ38 904 aaPredicted RBP8.57□□□□□ -1.04
SCN9A-203ENST00000409672 IL27RAQ6UWB1 636 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 HGH1Q9BTY7 390 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 ZFP14Q9HCL3 533 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 ZNF232Q9UNY5 417 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 SPATA31A5Q5VU36 1347 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 SPATA31A7Q8IWB4 1347 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 CCDC154A6NI56 674 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 FDFT1P37268 417 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 GPR158Q5T848 1215 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 METTL16Q86W50 562 aaKnown RBP8.56□□□□□ -1.04
SCN9A-203ENST00000409672 UBA2Q9UBT2 640 aaPredicted RBP8.56□□□□□ -1.04
SCN9A-203ENST00000409672 GTF3C4Q9UKN8 822 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 CDY1Q9Y6F8 540 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 ERAL1O75616 437 aaKnown RBP8.56□□□□□ -1.04
SCN9A-203ENST00000409672 ZNF37AP17032 561 aaPredicted RBP8.56□□□□□ -1.04
SCN9A-203ENST00000409672 HTR1BP28222 390 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 MADCAM1Q13477 382 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 SLC29A2Q14542 456 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 COLEC12Q5KU26 742 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 PHF19Q5T6S3 580 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 PARP9Q8IXQ6 854 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 MYCBPQ99417 103 aaPredicted RBP8.56□□□□□ -1.04
SCN9A-203ENST00000409672 ZCCHC2Q9C0B9 1178 aaKnown RBP8.56□□□□□ -1.04
SCN9A-203ENST00000409672 BHLHE41Q9C0J9 482 aaPredicted RBP8.56□□□□□ -1.04
SCN9A-203ENST00000409672 ASB8Q9H765 288 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 RABGEF1Q9UJ41 708 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 CDH9Q9ULB4 789 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 PCDHAC2Q9Y5I4 1007 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 ERVK-7P63135 1459 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 GRID2IPA4D2P6 1211 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 SDR42E2A6NKP2 422 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 CES2O00748 559 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 RHOBTB3O94955 611 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 RTN3O95197 1032 aaPredicted RBP8.56□□□□□ -1.04
SCN9A-203ENST00000409672 KCNJ5P48544 419 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 PGM5Q15124 567 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 ZNHIT3Q15649 155 aaPredicted RBP8.56□□□□□ -1.04
SCN9A-203ENST00000409672 RNF148Q8N7C7 305 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 FAM25EA8MYX2 175 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 GUCY1B2O75343 617 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 PABPC1P11940 636 aaKnown RBP8.56□□□□□ -1.04
SCN9A-203ENST00000409672 IGFALSP35858 605 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 BST2Q10589 180 aaKnown RBP8.56□□□□□ -1.04
SCN9A-203ENST00000409672 LRRC73Q5JTD7 316 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 CCSAPQ6IQ19 270 aaPredicted RBP8.56□□□□□ -1.04
SCN9A-203ENST00000409672 KLHL17Q6TDP4 642 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 TMPRSS9Q7Z410 1059 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 DAW1Q8N136 415 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 ZNF671Q8TAW3 534 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 SEC16BQ96JE7 1060 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 COQ7Q99807 217 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 CLEC4AQ9UMR7 237 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 PTGES3LE9PB15 166 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 CHRNB3Q05901 458 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 INAQ16352 499 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 TTC37Q6PGP7 1564 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 SLC41A1Q8IVJ1 513 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 EPB41L4AQ9HCS5 686 aaPredicted RBP8.56□□□□□ -1.04
SCN9A-203ENST00000409672 ANKEF1Q9NU02 776 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 CPSF1Q10570 1443 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms