RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 SLC32A1Q9H598 525 aa15.02■□□□□ -0
NIF3L1-205ENST00000409588 SGK2Q9HBY8 427 aa15.02■□□□□ -0
NIF3L1-205ENST00000409588 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.02■□□□□ -0
NIF3L1-205ENST00000409588 TPX2Q9ULW0 747 aaKnown RBP15.02■□□□□ -0
NIF3L1-205ENST00000409588 NCKAP1Q9Y2A7 1128 aa15.02■□□□□ -0
NIF3L1-205ENST00000409588 A0A1B0GTW7 788 aa15.01□□□□□ -0.01
NIF3L1-205ENST00000409588 A0A1B0GVM2 712 aa15.01□□□□□ -0.01
NIF3L1-205ENST00000409588 TCAF2A6NFQ2 919 aa15.01□□□□□ -0.01
NIF3L1-205ENST00000409588 DAB1O75553 588 aa15.01□□□□□ -0.01
NIF3L1-205ENST00000409588 CSKP41240 450 aa15.01□□□□□ -0.01
NIF3L1-205ENST00000409588 C5orf22Q49AR2 442 aa15.01□□□□□ -0.01
NIF3L1-205ENST00000409588 PTPN20Q4JDL3 420 aa15.01□□□□□ -0.01
NIF3L1-205ENST00000409588 HSP90AA4PQ58FG1 418 aa15.01□□□□□ -0.01
NIF3L1-205ENST00000409588 PITRM1Q5JRX3 1037 aa15.01□□□□□ -0.01
NIF3L1-205ENST00000409588 RNF219Q5W0B1 726 aaPredicted RBP15.01□□□□□ -0.01
NIF3L1-205ENST00000409588 RAP1GAP2Q684P5 730 aa15.01□□□□□ -0.01
NIF3L1-205ENST00000409588 CFAP52Q8N1V2 620 aa15.01□□□□□ -0.01
NIF3L1-205ENST00000409588 HDDC3Q8N4P3 179 aa15.01□□□□□ -0.01
NIF3L1-205ENST00000409588 GPT2Q8TD30 523 aa15.01□□□□□ -0.01
NIF3L1-205ENST00000409588 GPR174Q9BXC1 333 aa15.01□□□□□ -0.01
NIF3L1-205ENST00000409588 NAT10Q9H0A0 1025 aaKnown RBP15.01□□□□□ -0.01
NIF3L1-205ENST00000409588 BTBD1Q9H0C5 482 aa15.01□□□□□ -0.01
NIF3L1-205ENST00000409588 SLC6A17Q9H1V8 727 aa15.01□□□□□ -0.01
NIF3L1-205ENST00000409588 RSPH9Q9H1X1 276 aaPredicted RBP15.01□□□□□ -0.01
NIF3L1-205ENST00000409588 WDCPQ9H6R7 721 aa15.01□□□□□ -0.01
NIF3L1-205ENST00000409588 OSGEPQ9NPF4 335 aa15.01□□□□□ -0.01
NIF3L1-205ENST00000409588 ERVW-1Q9UQF0 538 aa15.01□□□□□ -0.01
NIF3L1-205ENST00000409588 FHOD1Q9Y613 1164 aa15.01□□□□□ -0.01
NIF3L1-205ENST00000409588 ITIH6Q6UXX5 1313 aa15□□□□□ -0.01
NIF3L1-205ENST00000409588 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15□□□□□ -0.01
NIF3L1-205ENST00000409588 EDDM13A0A1B0GTR0 161 aa15□□□□□ -0.01
NIF3L1-205ENST00000409588 MEI4A8MW99 385 aa15□□□□□ -0.01
NIF3L1-205ENST00000409588 F8VZ95 297 aa15□□□□□ -0.01
NIF3L1-205ENST00000409588 M0QYT0 321 aa15□□□□□ -0.01
NIF3L1-205ENST00000409588 OPHN1O60890 802 aa15□□□□□ -0.01
NIF3L1-205ENST00000409588 CLDN11O75508 207 aa15□□□□□ -0.01
NIF3L1-205ENST00000409588 ERBB2P04626 1255 aa15□□□□□ -0.01
NIF3L1-205ENST00000409588 HLA-EP13747 358 aa15□□□□□ -0.01
NIF3L1-205ENST00000409588 CXCR3P49682 368 aa15□□□□□ -0.01
NIF3L1-205ENST00000409588 RPS14P62263 151 aaKnown RBP15□□□□□ -0.01
NIF3L1-205ENST00000409588 MYL5Q02045 173 aa15□□□□□ -0.01
NIF3L1-205ENST00000409588 ZNF177Q13360 481 aaPredicted RBP15□□□□□ -0.01
NIF3L1-205ENST00000409588 AUHQ13825 339 aaKnown RBP15□□□□□ -0.01
NIF3L1-205ENST00000409588 KRT31Q15323 416 aa15□□□□□ -0.01
NIF3L1-205ENST00000409588 STX1AQ16623 288 aa15□□□□□ -0.01
NIF3L1-205ENST00000409588 PLEKHG6Q3KR16 790 aa15□□□□□ -0.01
NIF3L1-205ENST00000409588 SLC25A52Q3SY17 297 aa15□□□□□ -0.01
NIF3L1-205ENST00000409588 FSCBQ5H9T9 825 aa15□□□□□ -0.01
NIF3L1-205ENST00000409588 ZNF776Q68DI1 518 aaPredicted RBP15□□□□□ -0.01
NIF3L1-205ENST00000409588 IL27RAQ6UWB1 636 aa15□□□□□ -0.01
NIF3L1-205ENST00000409588 LRSAM1Q6UWE0 723 aa15□□□□□ -0.01
NIF3L1-205ENST00000409588 CCAR2Q8N163 923 aaKnown RBP15□□□□□ -0.01
NIF3L1-205ENST00000409588 DEFB119Q8N690 84 aa15□□□□□ -0.01
NIF3L1-205ENST00000409588 WFDC5Q8TCV5 224 aa15□□□□□ -0.01
NIF3L1-205ENST00000409588 NPY6RQ99463 290 aa15□□□□□ -0.01
NIF3L1-205ENST00000409588 VPS16Q9H269 839 aa15□□□□□ -0.01
NIF3L1-205ENST00000409588 RETREG1Q9H6L5 497 aa15□□□□□ -0.01
NIF3L1-205ENST00000409588 DNAAF2Q9NVR5 837 aaKnown RBP15□□□□□ -0.01
NIF3L1-205ENST00000409588 FANCLQ9NW38 375 aa15□□□□□ -0.01
NIF3L1-205ENST00000409588 AJAP1Q9UKB5 411 aaPredicted RBP15□□□□□ -0.01
NIF3L1-205ENST00000409588 INTS6Q9UL03 887 aaKnown RBP15□□□□□ -0.01
NIF3L1-205ENST00000409588 GRAP2O75791 330 aa14.99□□□□□ -0.01
NIF3L1-205ENST00000409588 CCDC172P0C7W6 258 aa14.99□□□□□ -0.01
NIF3L1-205ENST00000409588 CDK11BP21127 795 aaKnown RBP14.99□□□□□ -0.01
NIF3L1-205ENST00000409588 RDXP35241 583 aaKnown RBP14.99□□□□□ -0.01
NIF3L1-205ENST00000409588 SHC2P98077 582 aa14.99□□□□□ -0.01
NIF3L1-205ENST00000409588 NME3Q13232 169 aa14.99□□□□□ -0.01
NIF3L1-205ENST00000409588 N4BP2L1Q5TBK1 243 aaPredicted RBP14.99□□□□□ -0.01
NIF3L1-205ENST00000409588 DCAF12L1Q5VU92 463 aa14.99□□□□□ -0.01
NIF3L1-205ENST00000409588 FBXL22Q6P050 247 aa14.99□□□□□ -0.01
NIF3L1-205ENST00000409588 LRRC31Q6UY01 552 aa14.99□□□□□ -0.01
NIF3L1-205ENST00000409588 TRIM72Q6ZMU5 477 aa14.99□□□□□ -0.01
NIF3L1-205ENST00000409588 MYO19Q96H55 970 aa14.99□□□□□ -0.01
NIF3L1-205ENST00000409588 MRGPRX3Q96LB0 322 aa14.99□□□□□ -0.01
NIF3L1-205ENST00000409588 RPRD1AQ96P16 312 aaPredicted RBP14.99□□□□□ -0.01
NIF3L1-205ENST00000409588 MFRPQ9BY79 579 aa14.99□□□□□ -0.01
NIF3L1-205ENST00000409588 ARHGEF38Q9NXL2 777 aa14.99□□□□□ -0.01
NIF3L1-205ENST00000409588 TAB2Q9NYJ8 693 aa14.99□□□□□ -0.01
NIF3L1-205ENST00000409588 LIMA1Q9UHB6 759 aaKnown RBP14.99□□□□□ -0.01
NIF3L1-205ENST00000409588 XPO7Q9UIA9 1087 aaKnown RBP14.99□□□□□ -0.01
NIF3L1-205ENST00000409588 TBC1D30Q9Y2I9 924 aa14.99□□□□□ -0.01
NIF3L1-205ENST00000409588 CKAP5Q14008 2032 aa14.99□□□□□ -0.01
NIF3L1-205ENST00000409588 NCOR2Q9Y618 2525 aa14.98□□□□□ -0.01
NIF3L1-205ENST00000409588 BCAT2O15382 392 aaPredicted RBP14.98□□□□□ -0.01
NIF3L1-205ENST00000409588 SOX5P35711 763 aa14.98□□□□□ -0.01
NIF3L1-205ENST00000409588 STAT1P42224 750 aa14.98□□□□□ -0.01
NIF3L1-205ENST00000409588 NOVA1P51513 510 aaKnown RBP14.98□□□□□ -0.01
NIF3L1-205ENST00000409588 CDH4P55283 916 aa14.98□□□□□ -0.01
NIF3L1-205ENST00000409588 CDR2Q01850 454 aa14.98□□□□□ -0.01
NIF3L1-205ENST00000409588 SEMA3BQ13214 749 aa14.98□□□□□ -0.01
NIF3L1-205ENST00000409588 UAP1L1Q3KQV9 507 aa14.98□□□□□ -0.01
NIF3L1-205ENST00000409588 CCDC183Q5T5S1 534 aa14.98□□□□□ -0.01
NIF3L1-205ENST00000409588 C9orf64Q5T6V5 341 aa14.98□□□□□ -0.01
NIF3L1-205ENST00000409588 SH3PXD2AQ5TCZ1 1133 aa14.98□□□□□ -0.01
NIF3L1-205ENST00000409588 NOP9Q86U38 636 aaKnown RBP14.98□□□□□ -0.01
NIF3L1-205ENST00000409588 XYLT1Q86Y38 959 aa14.98□□□□□ -0.01
NIF3L1-205ENST00000409588 EPS8L1Q8TE68 723 aa14.98□□□□□ -0.01
NIF3L1-205ENST00000409588 SPAG5Q96R06 1193 aa14.98□□□□□ -0.01
NIF3L1-205ENST00000409588 HAPLN3Q96S86 360 aa14.98□□□□□ -0.01
NIF3L1-205ENST00000409588 FZD4Q9ULV1 537 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms