RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 KCNK1O00180 336 aa16.09■□□□□ 0.17
SHANK2-204ENST00000409530 SOX1O00570 391 aaPredicted RBP16.09■□□□□ 0.17
SHANK2-204ENST00000409530 FGF10O15520 208 aaPredicted RBP16.09■□□□□ 0.17
SHANK2-204ENST00000409530 SEC31AO94979 1220 aaKnown RBP16.09■□□□□ 0.17
SHANK2-204ENST00000409530 ITGAVP06756 1048 aa16.09■□□□□ 0.17
SHANK2-204ENST00000409530 EPHA5P54756 1037 aa16.09■□□□□ 0.17
SHANK2-204ENST00000409530 DLX2Q07687 328 aaPredicted RBP16.09■□□□□ 0.17
SHANK2-204ENST00000409530 GPS1Q13098 491 aa16.09■□□□□ 0.17
SHANK2-204ENST00000409530 PAFAH1B3Q15102 231 aaKnown RBP16.09■□□□□ 0.17
SHANK2-204ENST00000409530 HEATR6Q6AI08 1181 aaKnown RBP16.09■□□□□ 0.17
SHANK2-204ENST00000409530 LEKR1Q6ZMV7 388 aa16.09■□□□□ 0.17
SHANK2-204ENST00000409530 IFT20Q8IY31 132 aa16.09■□□□□ 0.17
SHANK2-204ENST00000409530 ZNF276Q8N554 614 aa16.09■□□□□ 0.17
SHANK2-204ENST00000409530 TFB1MQ8WVM0 346 aaKnown RBP16.09■□□□□ 0.17
SHANK2-204ENST00000409530 LRCH3Q96II8 777 aa16.09■□□□□ 0.17
SHANK2-204ENST00000409530 TARSL2A2RTX5 802 aaKnown RBP16.09■□□□□ 0.17
SHANK2-204ENST00000409530 P3H1Q32P28 736 aa16.09■□□□□ 0.17
SHANK2-204ENST00000409530 CDKL3Q8IVW4 592 aaPredicted RBP16.09■□□□□ 0.17
SHANK2-204ENST00000409530 ZNF683Q8IZ20 524 aa16.09■□□□□ 0.17
SHANK2-204ENST00000409530 RTL3Q8N8U3 475 aaKnown RBP16.09■□□□□ 0.17
SHANK2-204ENST00000409530 CCDC110Q8TBZ0 833 aa16.09■□□□□ 0.17
SHANK2-204ENST00000409530 USP33Q8TEY7 942 aa16.09■□□□□ 0.17
SHANK2-204ENST00000409530 USP13Q92995 863 aaPredicted RBP16.09■□□□□ 0.17
SHANK2-204ENST00000409530 C1orf74Q96LT6 269 aa16.09■□□□□ 0.17
SHANK2-204ENST00000409530 RUNDC3BQ96NL0 473 aa16.09■□□□□ 0.17
SHANK2-204ENST00000409530 NEUROG2Q9H2A3 272 aa16.09■□□□□ 0.17
SHANK2-204ENST00000409530 TASP1Q9H6P5 420 aa16.09■□□□□ 0.17
SHANK2-204ENST00000409530 FAM187AA6NFU0 413 aa16.08■□□□□ 0.16
SHANK2-204ENST00000409530 FGF19O95750 216 aa16.08■□□□□ 0.16
SHANK2-204ENST00000409530 OR1E1P30953 314 aa16.08■□□□□ 0.16
SHANK2-204ENST00000409530 HCAR3P49019 387 aa16.08■□□□□ 0.16
SHANK2-204ENST00000409530 RGS19P49795 217 aa16.08■□□□□ 0.16
SHANK2-204ENST00000409530 PLTPP55058 493 aa16.08■□□□□ 0.16
SHANK2-204ENST00000409530 TUBB4BP68371 445 aa16.08■□□□□ 0.16
SHANK2-204ENST00000409530 MTM1Q13496 603 aa16.08■□□□□ 0.16
SHANK2-204ENST00000409530 PTK6Q13882 451 aa16.08■□□□□ 0.16
SHANK2-204ENST00000409530 KCNC3Q14003 757 aa16.08■□□□□ 0.16
SHANK2-204ENST00000409530 SLC45A4Q5BKX6 768 aa16.08■□□□□ 0.16
SHANK2-204ENST00000409530 ARTNQ5T4W7 220 aa16.08■□□□□ 0.16
SHANK2-204ENST00000409530 ATPAF2Q8N5M1 289 aa16.08■□□□□ 0.16
SHANK2-204ENST00000409530 ZSCAN18Q8TBC5 510 aaPredicted RBP16.08■□□□□ 0.16
SHANK2-204ENST00000409530 OLFM3Q96PB7 478 aa16.08■□□□□ 0.16
SHANK2-204ENST00000409530 QKIQ96PU8 341 aaKnown RBP eCLIP16.08■□□□□ 0.162e-7■■■■□ 25.4
SHANK2-204ENST00000409530 CDCA3Q99618 268 aaPredicted RBP16.08■□□□□ 0.16
SHANK2-204ENST00000409530 DNAJC17Q9NVM6 304 aaKnown RBP16.08■□□□□ 0.16
SHANK2-204ENST00000409530 DYNC1I1O14576 645 aa16.07■□□□□ 0.16
SHANK2-204ENST00000409530 PPP1R12AO14974 1030 aaPredicted RBP16.07■□□□□ 0.16
SHANK2-204ENST00000409530 TBX10O75333 385 aa16.07■□□□□ 0.16
SHANK2-204ENST00000409530 TNNT3P45378 269 aaPredicted RBP16.07■□□□□ 0.16
SHANK2-204ENST00000409530 NR2C2P49116 596 aa16.07■□□□□ 0.16
SHANK2-204ENST00000409530 BASP1P80723 227 aaKnown RBP16.07■□□□□ 0.16
SHANK2-204ENST00000409530 SLC7A9P82251 487 aa16.07■□□□□ 0.16
SHANK2-204ENST00000409530 LMNB2Q03252 620 aa16.07■□□□□ 0.16
SHANK2-204ENST00000409530 ADGRE1Q14246 886 aa16.07■□□□□ 0.16
SHANK2-204ENST00000409530 ADGRF1Q5T601 910 aa16.07■□□□□ 0.16
SHANK2-204ENST00000409530 ARID3BQ8IVW6 561 aaPredicted RBP16.07■□□□□ 0.16
SHANK2-204ENST00000409530 SLC39A8Q9C0K1 460 aa16.07■□□□□ 0.16
SHANK2-204ENST00000409530 TDP1Q9NUW8 608 aa16.07■□□□□ 0.16
SHANK2-204ENST00000409530 DZANK1Q9NVP4 752 aa16.07■□□□□ 0.16
SHANK2-204ENST00000409530 TBL1XO60907 577 aa16.07■□□□□ 0.16
SHANK2-204ENST00000409530 HOXC13P31276 330 aa16.07■□□□□ 0.16
SHANK2-204ENST00000409530 PDK1Q15118 436 aa16.07■□□□□ 0.16
SHANK2-204ENST00000409530 RABGAP1LQ5R372 815 aa16.07■□□□□ 0.16
SHANK2-204ENST00000409530 ANKRD54Q6NXT1 300 aa16.07■□□□□ 0.16
SHANK2-204ENST00000409530 DRICH1Q6PGQ1 229 aaPredicted RBP16.07■□□□□ 0.16
SHANK2-204ENST00000409530 SYCE2Q6PIF2 218 aa16.07■□□□□ 0.16
SHANK2-204ENST00000409530 RTL10Q7L3V2 364 aa16.07■□□□□ 0.16
SHANK2-204ENST00000409530 NLRP14Q86W24 1093 aa16.07■□□□□ 0.16
SHANK2-204ENST00000409530 CARNMT1Q8N4J0 409 aa16.07■□□□□ 0.16
SHANK2-204ENST00000409530 GDF3Q9NR23 364 aa16.07■□□□□ 0.16
SHANK2-204ENST00000409530 FEZ2Q9UHY8 353 aaPredicted RBP16.07■□□□□ 0.16
SHANK2-204ENST00000409530 CLUHO75153 1309 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 GOLGA8MH3BSY2 632 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 ZNF197O14709 1029 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 GREM1O60565 184 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 RHOQP17081 205 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 FSHRP23945 695 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 VIPR2P41587 438 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 CLCN6P51797 869 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 ZNF135P52742 658 aaPredicted RBP16.06■□□□□ 0.16
SHANK2-204ENST00000409530 IZUMO3Q5VZ72 239 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 DUPD1Q68J44 220 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 ARHGAP12Q8IWW6 846 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 EFHBQ8N7U6 833 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 LEMD2Q8NC56 503 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 DDI1Q8WTU0 396 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 HTR3CQ8WXA8 447 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 HMCESQ96FZ2 354 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 P2RY11Q96G91 374 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 FRMD8P1Q9BZ68 369 aaPredicted RBP16.06■□□□□ 0.16
SHANK2-204ENST00000409530 KLC2Q9H0B6 622 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 ARHGAP26Q9UNA1 814 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 MYOFQ9NZM1 2061 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.06■□□□□ 0.16
SHANK2-204ENST00000409530 RNF103O00237 685 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 FAM153BP0C7A2 387 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 ACTN2P35609 894 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 GARSP41250 739 aaKnown RBP16.06■□□□□ 0.16
SHANK2-204ENST00000409530 PAPOLAP51003 745 aaKnown RBP16.06■□□□□ 0.16
SHANK2-204ENST00000409530 NRG1Q02297 640 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms