RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 ARMCX4Q5H9R4 360 aa7.46□□□□□ -1.21
SCN9A-202ENST00000409435 PKN3Q6P5Z2 889 aa7.46□□□□□ -1.21
SCN9A-202ENST00000409435 NLRP14Q86W24 1093 aa7.46□□□□□ -1.21
SCN9A-202ENST00000409435 ALLCQ8N6M5 410 aa7.46□□□□□ -1.21
SCN9A-202ENST00000409435 ZNF555Q8NEP9 628 aa7.46□□□□□ -1.21
SCN9A-202ENST00000409435 SLC2A14Q8TDB8 520 aa7.46□□□□□ -1.21
SCN9A-202ENST00000409435 SLC26A7Q8TE54 656 aa7.46□□□□□ -1.21
SCN9A-202ENST00000409435 TFB1MQ8WVM0 346 aaKnown RBP7.46□□□□□ -1.21
SCN9A-202ENST00000409435 BAP1Q92560 729 aa7.46□□□□□ -1.21
SCN9A-202ENST00000409435 STK33Q9BYT3 514 aa7.46□□□□□ -1.21
SCN9A-202ENST00000409435 ADNPQ9H2P0 1102 aa7.46□□□□□ -1.21
SCN9A-202ENST00000409435 CAAP1Q9H8G2 361 aa7.46□□□□□ -1.21
SCN9A-202ENST00000409435 VIPAS39Q9H9C1 493 aa7.46□□□□□ -1.21
SCN9A-202ENST00000409435 GKN1Q9NS71 199 aa7.46□□□□□ -1.21
SCN9A-202ENST00000409435 ATP8A1Q9Y2Q0 1164 aa7.46□□□□□ -1.21
SCN9A-202ENST00000409435 MEFVO15553 781 aaPredicted RBP7.46□□□□□ -1.21
SCN9A-202ENST00000409435 S100A1P23297 94 aa7.46□□□□□ -1.21
SCN9A-202ENST00000409435 TUBA1BP68363 451 aa7.46□□□□□ -1.21
SCN9A-202ENST00000409435 OCRLQ01968 901 aa7.46□□□□□ -1.21
SCN9A-202ENST00000409435 ROR1Q01973 937 aa7.46□□□□□ -1.21
SCN9A-202ENST00000409435 DRAP1Q14919 205 aaPredicted RBP7.46□□□□□ -1.21
SCN9A-202ENST00000409435 TBC1D25Q3MII6 688 aa7.46□□□□□ -1.21
SCN9A-202ENST00000409435 TUBA1AQ71U36 451 aa7.46□□□□□ -1.21
SCN9A-202ENST00000409435 GATAD2AQ86YP4 633 aa7.46□□□□□ -1.21
SCN9A-202ENST00000409435 CCDC28BQ9BUN5 200 aa7.46□□□□□ -1.21
SCN9A-202ENST00000409435 SPATA2Q9UM82 520 aa7.46□□□□□ -1.21
SCN9A-202ENST00000409435 TRIM33Q9UPN9 1127 aa7.46□□□□□ -1.21
SCN9A-202ENST00000409435 VPS9D1Q9Y2B5 631 aa7.46□□□□□ -1.21
SCN9A-202ENST00000409435 PLCH1Q4KWH8 1693 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 SIGLEC1Q9BZZ2 1709 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 CYP26A1O43174 497 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 KLHL41O60662 606 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 IL10P22301 178 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 RARRES1P49788 294 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 ADKP55263 362 aaKnown RBP7.46□□□□□ -1.22
SCN9A-202ENST00000409435 GPC5P78333 572 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 ELP6Q0PNE2 266 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 ADIGQ0VDE8 80 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 TDGQ13569 410 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 TUBA3EQ6PEY2 450 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 TRIM67Q6ZTA4 783 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 CENPUQ71F23 418 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 TRIM69Q86WT6 500 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 PHYKPLQ8IUZ5 450 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 COLGALT2Q8IYK4 626 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 TRMT2AQ8IZ69 625 aaKnown RBP7.46□□□□□ -1.22
SCN9A-202ENST00000409435 ZBTB18Q99592 522 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 PIGUQ9H490 435 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 PDLIM7Q9NR12 457 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 CYP8B1Q9UNU6 501 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 DYRK1BQ9Y463 629 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 SQORQ9Y6N5 450 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 AKAP12Q02952 1782 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 A0A088AWK7 358 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 A0A0G2JND7 137 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 SYNDIG1LA6NDD5 238 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 TNFRSF10AO00220 468 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 XPO1O14980 1071 aaKnown RBP7.46□□□□□ -1.22
SCN9A-202ENST00000409435 P4HA2O15460 535 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 KLF8O95600 359 aaPredicted RBP7.46□□□□□ -1.22
SCN9A-202ENST00000409435 VIPP01282 170 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 SERPING1P05155 500 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 CCNYL3P0C7X3 344 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 HPGDP15428 266 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 ZNF10P21506 573 aaPredicted RBP7.46□□□□□ -1.22
SCN9A-202ENST00000409435 CLK1P49759 484 aaKnown RBP7.46□□□□□ -1.22
SCN9A-202ENST00000409435 PEX5P50542 639 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 CSE1LP55060 971 aaKnown RBP7.46□□□□□ -1.22
SCN9A-202ENST00000409435 TUBA4AP68366 448 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 MRPS25P82663 173 aaKnown RBP7.46□□□□□ -1.22
SCN9A-202ENST00000409435 FBXO43Q4G163 708 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 C11orf88Q6PI97 169 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 ARMC5Q96C12 935 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 UBA2Q9UBT2 640 aaPredicted RBP7.46□□□□□ -1.22
SCN9A-202ENST00000409435 SNAI1O95863 264 aaPredicted RBP7.46□□□□□ -1.22
SCN9A-202ENST00000409435 AGXTP21549 392 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 CASRP41180 1078 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 NDST1P52848 882 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 MAPK10P53779 464 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 LMAN2Q12907 356 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 PDAP1Q13442 181 aaKnown RBP7.46□□□□□ -1.22
SCN9A-202ENST00000409435 SMAD4Q13485 552 aaKnown RBP7.46□□□□□ -1.22
SCN9A-202ENST00000409435 CAPRIN1Q14444 709 aaKnown RBP7.46□□□□□ -1.22
SCN9A-202ENST00000409435 TEAD2Q15562 447 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 UGT3A1Q6NUS8 523 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 SIRT2Q8IXJ6 389 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 TAGAPQ8N103 731 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 CYP4X1Q8N118 509 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 ARL14EPQ8N8R7 260 aaPredicted RBP7.46□□□□□ -1.22
SCN9A-202ENST00000409435 ATAD1Q8NBU5 361 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 SH3RF2Q8TEC5 729 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 METTL21AQ8WXB1 218 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 DESI2Q9BSY9 194 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 CASS4Q9NQ75 786 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 GDF3Q9NR23 364 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 SIRPGQ9P1W8 387 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 OGDHLQ9ULD0 1010 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 FHOD1Q9Y613 1164 aa7.46□□□□□ -1.22
SCN9A-202ENST00000409435 NWD2Q9ULI1 1742 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 GSAPA4D1B5 854 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms