RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 C11orf74Q86VG3 221 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 SLC26A11Q86WA9 606 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 CATSPER3Q86XQ3 398 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 CPNE8Q86YQ8 564 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 C7orf61Q8IZ16 206 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 CHAC2Q8WUX2 184 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 HSPH1Q92598 858 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 TMIGD2Q96BF3 282 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 FAM20AQ96MK3 541 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 RUSC1Q9BVN2 902 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 SMYD3Q9H7B4 428 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 UGT1A7Q9HAW7 530 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 UGT1A10Q9HAW8 530 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 UGT1A8Q9HAW9 530 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 PARVGQ9HBI0 331 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 MRPL40Q9NQ50 206 aaKnown RBP10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 ANKMY1Q9P2S6 941 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 CRNNQ9UBG3 495 aaPredicted RBP10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 SUCOQ9UBS9 1254 aaKnown RBP10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 PCDHGB4Q9UN71 923 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 PCDHGB5Q9Y5G0 923 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 PNMA6FA0A0J9YX94 578 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 ARHGEF37A1IGU5 675 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 ANKRD34BA5PLL1 514 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 TTC34A8MYJ7 566 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 CLIC2O15247 247 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 NDUFB5O43674 189 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 BCAS2O75934 225 aaPredicted RBP10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 PGK1P00558 417 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 INHBAP08476 426 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 UNGP13051 313 aaPredicted RBP10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 P4HA1P13674 534 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 CYP11B1P15538 503 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 GRK2P25098 689 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 PSMD8P48556 350 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 NDST2P52849 883 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 ATN1P54259 1190 aaPredicted RBP10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 FOXK1P85037 733 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 NFX1Q12986 1120 aaKnown RBP10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 UBAP2LQ14157 1087 aaKnown RBP10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 NR1D2Q14995 579 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 C6orf52Q5T4I8 152 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 TMEM214Q6NUQ4 689 aaKnown RBP10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 NSMFQ6X4W1 530 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 SLC30A10Q6XR72 485 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 ARMCX2Q7L311 632 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 MCF2L2Q86YR7 1114 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 HPS6Q86YV9 775 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 CLVS1Q8IUQ0 354 aaPredicted RBP10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 PALM2Q8IXS6 379 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 MCOLN2Q8IZK6 566 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 LSMEM2Q8N112 164 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 PDIK1LQ8N165 341 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 TTC30BQ8N4P2 665 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 OR7G1Q8NGA0 311 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 SLC35B2Q8TB61 432 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 PNPT1Q8TCS8 783 aaKnown RBP10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 USP33Q8TEY7 942 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 TFB1MQ8WVM0 346 aaKnown RBP10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 MED30Q96HR3 178 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 BTBD6Q96KE9 485 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 CNDP1Q96KN2 507 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 ZNF347Q96SE7 839 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 NDEL1Q9GZM8 345 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 KATNBL1Q9H079 304 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 ZHX3Q9H4I2 956 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 VRTNQ9H8Y1 702 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 PSTPIP2Q9H939 334 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 XAB2Q9HCS7 855 aaKnown RBP10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 MRPL47Q9HD33 250 aaKnown RBP10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 FBXO40Q9UH90 709 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 COQ4Q9Y3A0 265 aa10.88□□□□□ -0.67
NIF3L1-204ENST00000409357 MYADML2A6NDP7 307 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 XPOTO43592 962 aaKnown RBP10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 MSCO60682 206 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 NTRK1P04629 796 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 COX4I1P13073 169 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 SYN1P17600 705 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 CNTFP26441 200 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 GABRB3P28472 473 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 SSTR1P30872 391 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 MXI1P50539 228 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 NLRP11P59045 1033 aaKnown RBP10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 TUBA3CQ13748 450 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 HERC3Q15034 1050 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 CHI3L2Q15782 390 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 TRIM16LQ309B1 348 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 MGAT5BQ3V5L5 792 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 PIGGQ5H8A4 983 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 ANKRD26P1Q6NSI1 321 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 KIAA1841Q6NSI8 718 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 ZNF720Q7Z2F6 126 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 ARHGEF19Q8IW93 802 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 MFSD2AQ8NA29 543 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 ACMSDQ8TDX5 336 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 CLEC4DQ8WXI8 215 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 TMA16Q96EY4 203 aaKnown RBP10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 FIZ1Q96SL8 496 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 YME1L1Q96TA2 773 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 279.1 ms