RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 DMXL2Q8TDJ6 3036 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 A0A1B0GVM2 712 aa15.87■□□□□ 0.13
TPM1-207ENST00000403994 TCAF2A6NFQ2 919 aa15.87■□□□□ 0.13
TPM1-207ENST00000403994 F8VZ95 297 aa15.87■□□□□ 0.13
TPM1-207ENST00000403994 SIN3BO75182 1162 aa15.87■□□□□ 0.13
TPM1-207ENST00000403994 GJB3O75712 270 aa15.87■□□□□ 0.13
TPM1-207ENST00000403994 DNTTP04053 509 aa15.87■□□□□ 0.13
TPM1-207ENST00000403994 UCHL3P15374 230 aa15.87■□□□□ 0.13
TPM1-207ENST00000403994 CYP11B1P15538 503 aa15.87■□□□□ 0.13
TPM1-207ENST00000403994 ABCB4P21439 1286 aa15.87■□□□□ 0.13
TPM1-207ENST00000403994 CDH5P33151 784 aaPredicted RBP15.87■□□□□ 0.13
TPM1-207ENST00000403994 IRAK1P51617 712 aa15.87■□□□□ 0.13
TPM1-207ENST00000403994 SNX16P57768 344 aa15.87■□□□□ 0.13
TPM1-207ENST00000403994 BPIFB4P59827 614 aa15.87■□□□□ 0.13
TPM1-207ENST00000403994 SLC6A3Q01959 620 aa15.87■□□□□ 0.13
TPM1-207ENST00000403994 CT47A1Q5JQC4 288 aaPredicted RBP15.87■□□□□ 0.13
TPM1-207ENST00000403994 RABGAP1LQ5R372 815 aa15.87■□□□□ 0.13
TPM1-207ENST00000403994 DHX40Q8IX18 779 aaKnown RBP15.87■□□□□ 0.13
TPM1-207ENST00000403994 CCAR2Q8N163 923 aaKnown RBP15.87■□□□□ 0.13
TPM1-207ENST00000403994 ZNF397Q8NF99 534 aaPredicted RBP15.87■□□□□ 0.13
TPM1-207ENST00000403994 C1orf216Q8TAB5 229 aa15.87■□□□□ 0.13
TPM1-207ENST00000403994 SLC32A1Q9H598 525 aa15.87■□□□□ 0.13
TPM1-207ENST00000403994 TAB2Q9NYJ8 693 aa15.87■□□□□ 0.13
TPM1-207ENST00000403994 KIAA1522Q9P206 1035 aaPredicted RBP15.87■□□□□ 0.13
TPM1-207ENST00000403994 SUN2Q9UH99 717 aa15.87■□□□□ 0.13
TPM1-207ENST00000403994 EIF2B4Q9UI10 523 aaKnown RBP15.87■□□□□ 0.13
TPM1-207ENST00000403994 ERVW-1Q9UQF0 538 aa15.87■□□□□ 0.13
TPM1-207ENST00000403994 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.87■□□□□ 0.13
TPM1-207ENST00000403994 SLCO1B1Q9Y6L6 691 aa15.87■□□□□ 0.13
TPM1-207ENST00000403994 KNL1Q8NG31 2342 aa15.86■□□□□ 0.13
TPM1-207ENST00000403994 TTC34A8MYJ7 566 aa15.86■□□□□ 0.13
TPM1-207ENST00000403994 BCAT2O15382 392 aaPredicted RBP15.86■□□□□ 0.13
TPM1-207ENST00000403994 MOCS3O95396 460 aa15.86■□□□□ 0.13
TPM1-207ENST00000403994 SEMA4FO95754 770 aa15.86■□□□□ 0.13
TPM1-207ENST00000403994 SRPRAP08240 638 aaKnown RBP15.86■□□□□ 0.13
TPM1-207ENST00000403994 PDGFRAP16234 1089 aa15.86■□□□□ 0.13
TPM1-207ENST00000403994 GGCXP38435 758 aa15.86■□□□□ 0.13
TPM1-207ENST00000403994 NUMBP49757 651 aa15.86■□□□□ 0.13
TPM1-207ENST00000403994 STK19P49842 368 aaPredicted RBP15.86■□□□□ 0.13
TPM1-207ENST00000403994 ECT2LQ008S8 904 aa15.86■□□□□ 0.13
TPM1-207ENST00000403994 NME3Q13232 169 aa15.86■□□□□ 0.13
TPM1-207ENST00000403994 CDKAL1Q5VV42 579 aa15.86■□□□□ 0.13
TPM1-207ENST00000403994 TAF3Q5VWG9 929 aa15.86■□□□□ 0.13
TPM1-207ENST00000403994 CXorf57Q6NSI4 855 aaKnown RBP15.86■□□□□ 0.13
TPM1-207ENST00000403994 RBM43Q6ZSC3 357 aaKnown RBP15.86■□□□□ 0.13
TPM1-207ENST00000403994 ZDHHC17Q8IUH5 632 aa15.86■□□□□ 0.13
TPM1-207ENST00000403994 APCDD1Q8J025 514 aa15.86■□□□□ 0.13
TPM1-207ENST00000403994 GPT2Q8TD30 523 aa15.86■□□□□ 0.13
TPM1-207ENST00000403994 RNF34Q969K3 372 aa15.86■□□□□ 0.13
TPM1-207ENST00000403994 ZDHHC5Q9C0B5 715 aa15.86■□□□□ 0.13
TPM1-207ENST00000403994 PABPC3Q9H361 631 aaKnown RBP15.86■□□□□ 0.13
TPM1-207ENST00000403994 SERGEFQ9UGK8 458 aa15.86■□□□□ 0.13
TPM1-207ENST00000403994 SLC12A6Q9UHW9 1150 aa15.86■□□□□ 0.13
TPM1-207ENST00000403994 WASF3Q9UPY6 502 aa15.86■□□□□ 0.13
TPM1-207ENST00000403994 DOCK4Q8N1I0 1966 aa15.86■□□□□ 0.13
TPM1-207ENST00000403994 EDDM13A0A1B0GTR0 161 aa15.85■□□□□ 0.13
TPM1-207ENST00000403994 FAM170AA1A519 330 aa15.85■□□□□ 0.13
TPM1-207ENST00000403994 LSM8O95777 96 aaKnown RBP15.85■□□□□ 0.13
TPM1-207ENST00000403994 CD59P13987 128 aa15.85■□□□□ 0.13
TPM1-207ENST00000403994 TFE3P19532 575 aaPredicted RBP15.85■□□□□ 0.13
TPM1-207ENST00000403994 MZF1P28698 734 aaPredicted RBP15.85■□□□□ 0.13
TPM1-207ENST00000403994 NOS2P35228 1153 aa15.85■□□□□ 0.13
TPM1-207ENST00000403994 MATKP42679 507 aa15.85■□□□□ 0.13
TPM1-207ENST00000403994 BNC1Q01954 994 aa15.85■□□□□ 0.13
TPM1-207ENST00000403994 FOXC1Q12948 553 aa15.85■□□□□ 0.13
TPM1-207ENST00000403994 SLC12A1Q13621 1099 aa15.85■□□□□ 0.13
TPM1-207ENST00000403994 AUHQ13825 339 aaKnown RBP15.85■□□□□ 0.13
TPM1-207ENST00000403994 CST6Q15828 149 aa15.85■□□□□ 0.13
TPM1-207ENST00000403994 C9orf64Q5T6V5 341 aa15.85■□□□□ 0.13
TPM1-207ENST00000403994 RNF219Q5W0B1 726 aaPredicted RBP15.85■□□□□ 0.13
TPM1-207ENST00000403994 FBXL22Q6P050 247 aa15.85■□□□□ 0.13
TPM1-207ENST00000403994 USP30Q70CQ3 517 aa15.85■□□□□ 0.13
TPM1-207ENST00000403994 NOP9Q86U38 636 aaKnown RBP15.85■□□□□ 0.13
TPM1-207ENST00000403994 TMEM35BQ8NCS4 154 aa15.85■□□□□ 0.13
TPM1-207ENST00000403994 EPS8L1Q8TE68 723 aa15.85■□□□□ 0.13
TPM1-207ENST00000403994 IGSF8Q969P0 613 aa15.85■□□□□ 0.13
TPM1-207ENST00000403994 RPL10LQ96L21 214 aaKnown RBP15.85■□□□□ 0.13
TPM1-207ENST00000403994 RPRD1AQ96P16 312 aaPredicted RBP15.85■□□□□ 0.13
TPM1-207ENST00000403994 BTBD1Q9H0C5 482 aa15.85■□□□□ 0.13
TPM1-207ENST00000403994 GANQ9H2C0 597 aa15.85■□□□□ 0.13
TPM1-207ENST00000403994 PIGVQ9NUD9 493 aa15.85■□□□□ 0.13
TPM1-207ENST00000403994 VANGL2Q9ULK5 521 aa15.85■□□□□ 0.13
TPM1-207ENST00000403994 HS3ST4Q9Y661 456 aa15.85■□□□□ 0.13
TPM1-207ENST00000403994 DSPP15924 2871 aaKnown RBP15.85■□□□□ 0.13
TPM1-207ENST00000403994 SPAARA0A1B0GVQ0 90 aa15.84■□□□□ 0.13
TPM1-207ENST00000403994 M0QYT0 321 aa15.84■□□□□ 0.13
TPM1-207ENST00000403994 MID1O15344 667 aa15.84■□□□□ 0.13
TPM1-207ENST00000403994 PAGE1O75459 146 aa15.84■□□□□ 0.13
TPM1-207ENST00000403994 SCNN1AP37088 669 aa15.84■□□□□ 0.13
TPM1-207ENST00000403994 GABRB2P47870 512 aa15.84■□□□□ 0.13
TPM1-207ENST00000403994 KRT31Q15323 416 aa15.84■□□□□ 0.13
TPM1-207ENST00000403994 FAM102AQ5T9C2 384 aaPredicted RBP15.84■□□□□ 0.13
TPM1-207ENST00000403994 XYLT1Q86Y38 959 aa15.84■□□□□ 0.13
TPM1-207ENST00000403994 ENOX1Q8TC92 643 aaKnown RBP15.84■□□□□ 0.13
TPM1-207ENST00000403994 BIRC7Q96CA5 298 aa15.84■□□□□ 0.13
TPM1-207ENST00000403994 NPY6RQ99463 290 aa15.84■□□□□ 0.13
TPM1-207ENST00000403994 PDCL3Q9H2J4 239 aa15.84■□□□□ 0.13
TPM1-207ENST00000403994 SGK2Q9HBY8 427 aa15.84■□□□□ 0.13
TPM1-207ENST00000403994 RRN3Q9NYV6 651 aa15.84■□□□□ 0.13
TPM1-207ENST00000403994 SLCO3A1Q9UIG8 710 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms