RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 ARHGAP18Q8N392 663 aa12.35□□□□□ -0.43
SPTLC1P3-201ENST00000403408 ANKRD52Q8NB46 1076 aa12.35□□□□□ -0.43
SPTLC1P3-201ENST00000403408 ZNF248Q8NDW4 579 aa12.35□□□□□ -0.43
SPTLC1P3-201ENST00000403408 SNRNP27Q8WVK2 155 aaKnown RBP12.35□□□□□ -0.43
SPTLC1P3-201ENST00000403408 PTPRN2Q92932 1015 aa12.35□□□□□ -0.43
SPTLC1P3-201ENST00000403408 FAM131CQ96AQ9 280 aa12.35□□□□□ -0.43
SPTLC1P3-201ENST00000403408 CISHQ9NSE2 258 aa12.35□□□□□ -0.43
SPTLC1P3-201ENST00000403408 STIM2Q9P246 746 aa12.35□□□□□ -0.43
SPTLC1P3-201ENST00000403408 FZD4Q9ULV1 537 aa12.35□□□□□ -0.43
SPTLC1P3-201ENST00000403408 FARP1Q9Y4F1 1045 aaPredicted RBP12.35□□□□□ -0.43
SPTLC1P3-201ENST00000403408 LRRC72A6NJI9 287 aa12.34□□□□□ -0.43
SPTLC1P3-201ENST00000403408 YKT6O15498 198 aa12.34□□□□□ -0.43
SPTLC1P3-201ENST00000403408 LATS1O95835 1130 aa12.34□□□□□ -0.43
SPTLC1P3-201ENST00000403408 C6P13671 934 aa12.34□□□□□ -0.43
SPTLC1P3-201ENST00000403408 GOT1P17174 413 aa12.34□□□□□ -0.43
SPTLC1P3-201ENST00000403408 MAT2AP31153 395 aaKnown RBP12.34□□□□□ -0.43
SPTLC1P3-201ENST00000403408 ARRB1P49407 418 aaPredicted RBP12.34□□□□□ -0.43
SPTLC1P3-201ENST00000403408 STK19P49842 368 aaPredicted RBP12.34□□□□□ -0.43
SPTLC1P3-201ENST00000403408 VAMP7P51809 220 aa12.34□□□□□ -0.43
SPTLC1P3-201ENST00000403408 SRSF1Q07955 248 aaKnown RBP eCLIP12.34□□□□□ -0.43
SPTLC1P3-201ENST00000403408 GOLGA7BQ2TAP0 167 aa12.34□□□□□ -0.43
SPTLC1P3-201ENST00000403408 KIAA1614Q5VZ46 1190 aa12.34□□□□□ -0.43
SPTLC1P3-201ENST00000403408 CEP135Q66GS9 1140 aa12.34□□□□□ -0.43
SPTLC1P3-201ENST00000403408 LURAP1LQ8IV03 231 aa12.34□□□□□ -0.43
SPTLC1P3-201ENST00000403408 APCDD1Q8J025 514 aa12.34□□□□□ -0.43
SPTLC1P3-201ENST00000403408 MFSD2AQ8NA29 543 aa12.34□□□□□ -0.43
SPTLC1P3-201ENST00000403408 OR14C36Q8NHC7 312 aa12.34□□□□□ -0.43
SPTLC1P3-201ENST00000403408 FIBINQ8TAL6 211 aa12.34□□□□□ -0.43
SPTLC1P3-201ENST00000403408 GOLGA5Q8TBA6 731 aa12.34□□□□□ -0.43
SPTLC1P3-201ENST00000403408 OMDQ99983 421 aa12.34□□□□□ -0.43
SPTLC1P3-201ENST00000403408 CYTH4Q9UIA0 394 aa12.34□□□□□ -0.43
SPTLC1P3-201ENST00000403408 SARDHQ9UL12 918 aa12.34□□□□□ -0.43
SPTLC1P3-201ENST00000403408 SCML1Q9UN30 329 aa12.34□□□□□ -0.43
SPTLC1P3-201ENST00000403408 ERVW-1Q9UQF0 538 aa12.34□□□□□ -0.43
SPTLC1P3-201ENST00000403408 A0A1B0GVM2 712 aa12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 PDXKO00764 312 aa12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 OPA1O60313 960 aa12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 ACSL4O60488 711 aa12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 CUTAO60888 179 aa12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 PPP6R2O75170 966 aa12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 RTN2O75298 545 aa12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 DXOO77932 396 aaKnown RBP12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 WISP1O95388 367 aa12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 SLFN14P0C7P3 912 aa12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 PCBP4P57723 403 aaKnown RBP12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 TMPRSS3P57727 454 aa12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 MCCD1P59942 119 aaPredicted RBP12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 GABREP78334 506 aa12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 SKOR1P84550 965 aa12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 KCNC4Q03721 635 aa12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 ADIGQ0VDE8 80 aa12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 KMT5BQ4FZB7 885 aa12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 PITRM1Q5JRX3 1037 aa12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 MPP7Q5T2T1 576 aa12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 NAPEPLDQ6IQ20 393 aa12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 MSANTD2Q6P1R3 559 aa12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 CFAP52Q8N1V2 620 aa12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 UBA3Q8TBC4 463 aa12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 CLEC4CQ8WTT0 213 aa12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 PRR11Q96HE9 360 aaPredicted RBP12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 RPL10LQ96L21 214 aaKnown RBP12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 ZNF578Q96N58 590 aaPredicted RBP12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 NUCKS1Q9H1E3 243 aaKnown RBP12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 MMRN2Q9H8L6 949 aa12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 XPO7Q9UIA9 1087 aaKnown RBP12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 ITIH6Q6UXX5 1313 aa12.33□□□□□ -0.44
SPTLC1P3-201ENST00000403408 TARSL2A2RTX5 802 aaKnown RBP12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 RNF103O00237 685 aa12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 PIK3R2O00459 728 aa12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 XPO1O14980 1071 aaKnown RBP12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 KLK10O43240 276 aa12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 ACTN4O43707 911 aaKnown RBP12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 FYNP06241 537 aa12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 PDIA4P13667 645 aaKnown RBP12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 PDCP20941 246 aa12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 DGKAP23743 735 aa12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 MZF1P28698 734 aaPredicted RBP12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 DAOAP59103 153 aa12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 ZNF211Q13398 564 aaPredicted RBP12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 POM121L1PQ3SYA9 428 aa12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 SND1Q7KZF4 910 aaKnown RBP eCLIP12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 TMC6Q7Z403 805 aa12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 MFN1Q8IWA4 741 aa12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 EXD3Q8N9H8 876 aa12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 FRS2Q8WU20 508 aa12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 SKA1Q96BD8 255 aa12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 EEF2KMTQ96G04 330 aa12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 VCPIP1Q96JH7 1222 aa12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 FCRL2Q96LA5 508 aaPredicted RBP12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 ZSWIM1Q9BR11 485 aa12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 OLA1Q9NTK5 396 aaKnown RBP12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 SERTAD1Q9UHV2 236 aa12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 TSPAN16Q9UKR8 245 aa12.32□□□□□ -0.44
SPTLC1P3-201ENST00000403408 MYO9AB2RTY4 2548 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 TBC1D3DA0A087WVF3 549 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 TBC1D3IA0A087WXS9 549 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 TBC1D3EA0A087X179 549 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 TBC1D3KA0A087X1G2 549 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 TBC1D3FA6NER0 549 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms