RNA–Protein interactions for RNA: ENST00000399953.7

NPRL3-201, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 1 (best) BASIC

Gene NPRL3, Length 2,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-201ENST00000399953 TRIM71Q2Q1W2 868 aaKnown RBP16.96■□□□□ 0.31
NPRL3-201ENST00000399953 SLX4IPQ5VYV7 408 aa16.96■□□□□ 0.31
NPRL3-201ENST00000399953 TTBK2Q6IQ55 1244 aa16.96■□□□□ 0.31
NPRL3-201ENST00000399953 XXYLT1Q8NBI6 393 aa16.96■□□□□ 0.31
NPRL3-201ENST00000399953 FNIP1Q8TF40 1166 aa16.96■□□□□ 0.31
NPRL3-201ENST00000399953 ASB9Q96DX5 294 aa16.96■□□□□ 0.31
NPRL3-201ENST00000399953 CNDP1Q96KN2 507 aa16.96■□□□□ 0.31
NPRL3-201ENST00000399953 FAM20AQ96MK3 541 aa16.96■□□□□ 0.31
NPRL3-201ENST00000399953 FRMD8P1Q9BZ68 369 aaPredicted RBP16.96■□□□□ 0.31
NPRL3-201ENST00000399953 GLT8D2Q9H1C3 349 aa16.96■□□□□ 0.31
NPRL3-201ENST00000399953 RETREG1Q9H6L5 497 aa16.96■□□□□ 0.31
NPRL3-201ENST00000399953 SMOXQ9NWM0 555 aa16.96■□□□□ 0.31
NPRL3-201ENST00000399953 KLQ9UEF7 1012 aa16.96■□□□□ 0.31
NPRL3-201ENST00000399953 AGO2Q9UKV8 859 aaKnown RBP16.96■□□□□ 0.31
NPRL3-201ENST00000399953 FAM172BPA6NC97 362 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 STX16-NPEPL1H3BU86 382 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 TRIM38O00635 465 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 SCO2O43819 266 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 KCNH1O95259 989 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 GLDCP23378 1020 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 HARS2P49590 506 aaKnown RBP16.95■□□□□ 0.3
NPRL3-201ENST00000399953 CLK3P49761 638 aaKnown RBP16.95■□□□□ 0.3
NPRL3-201ENST00000399953 RHDQ02161 417 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 ART3Q13508 389 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 FAXCQ5TGI0 409 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 TMC5Q6UXY8 1006 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 C16orf86Q6ZW13 317 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 HERC6Q8IVU3 1022 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 FEZF2Q8TBJ5 459 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 UHRF1Q96T88 793 aaPredicted RBP16.95■□□□□ 0.3
NPRL3-201ENST00000399953 YME1L1Q96TA2 773 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 NOL11Q9H8H0 719 aaKnown RBP16.95■□□□□ 0.3
NPRL3-201ENST00000399953 TBC1D22BQ9NU19 505 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 SAE1Q9UBE0 346 aaPredicted RBP16.95■□□□□ 0.3
NPRL3-201ENST00000399953 TCAF1Q9Y4C2 921 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 ICMTO60725 284 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 CKMT2P17540 419 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 PROZP22891 400 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 NOVP48745 357 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 IST1P53990 364 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 PCLAFQ15004 111 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 SLC9B1Q4ZJI4 515 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 N4BP2L1Q5TBK1 243 aaPredicted RBP16.95■□□□□ 0.3
NPRL3-201ENST00000399953 PTAR1Q7Z6K3 402 aaPredicted RBP16.95■□□□□ 0.3
NPRL3-201ENST00000399953 ESX1Q8N693 406 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 MFSD2AQ8NA29 543 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 FEM1CQ96JP0 617 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 CBWD1Q9BRT8 395 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 STRA6Q9BX79 667 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 CDY2AQ9Y6F7 541 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 CDY1Q9Y6F8 540 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 CNTNAP2Q9UHC6 1331 aa16.95■□□□□ 0.3
NPRL3-201ENST00000399953 TISP43B9A030 160 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 SOCS2O14508 198 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 SERPINB1P30740 379 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 QARSP47897 775 aaKnown RBP16.94■□□□□ 0.3
NPRL3-201ENST00000399953 DYNLT1P63172 113 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 RFTN1Q14699 578 aaPredicted RBP16.94■□□□□ 0.3
NPRL3-201ENST00000399953 GADL1Q6ZQY3 521 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 CHSY3Q70JA7 882 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 EXOC8Q8IYI6 725 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 ANKFN1Q8N957 763 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 ACSF2Q96CM8 615 aaPredicted RBP16.94■□□□□ 0.3
NPRL3-201ENST00000399953 EFHD1Q9BUP0 239 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 ADI1Q9BV57 179 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 SMYD2Q9NRG4 433 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 VAV3Q9UKW4 847 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 EMCNQ9ULC0 261 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 GABBR2O75899 941 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 ALX3O95076 343 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 VAPBO95292 243 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 CPNE6O95741 557 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 FYNP06241 537 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 CSH1P0DML2 217 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 CSH2P0DML3 217 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 PRKCAP17252 672 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 ARRB2P32121 409 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 SERPINB9P50453 376 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 RAD23AP54725 363 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 CSE1LP55060 971 aaKnown RBP16.94■□□□□ 0.3
NPRL3-201ENST00000399953 PHC1P78364 1004 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 IFITM3Q01628 133 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 DPYSL3Q14195 570 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 TMTC4Q5T4D3 741 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 HMBOX1Q6NT76 420 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 UGT3A1Q6NUS8 523 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 FAM156AQ8NDB6 213 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 S100ZQ8WXG8 99 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 TRIT1Q9H3H1 467 aaKnown RBP16.94■□□□□ 0.3
NPRL3-201ENST00000399953 NEK6Q9HC98 313 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 AKIP1Q9NQ31 210 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 TCF7L2Q9NQB0 619 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 TMOD3Q9NYL9 352 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 ZC3H7BQ9UGR2 993 aaKnown RBP16.94■□□□□ 0.3
NPRL3-201ENST00000399953 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.94■□□□□ 0.3
NPRL3-201ENST00000399953 TANC1Q9C0D5 1861 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 HMX2A2RU54 273 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 GLRA3O75311 464 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 KRT3P12035 628 aa16.94■□□□□ 0.3
NPRL3-201ENST00000399953 YBX3P16989 372 aaKnown RBP eCLIP16.94■□□□□ 0.34e-6■■■□□ 15.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms