RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 SCUBE3Q8IX30 993 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 SH2D3CQ8N5H7 860 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 FAM160A2Q8N612 972 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 FAM71BQ8TC56 605 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 SYT17Q9BSW7 474 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 KIFC3Q9BVG8 833 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 OSBPL10Q9BXB5 764 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 PNPLA8Q9NP80 782 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 RBM12Q9NTZ6 932 aaKnown RBP6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 WRAP73Q9P2S5 460 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 MORF4L1Q9UBU8 362 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 SEPT9Q9UHD8 586 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 ADAM21Q9UKJ8 722 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 TELO2Q9Y4R8 837 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 PCDHGA5Q9Y5G8 931 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 PCDHGA1Q9Y5H4 931 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 METTL12A8MUP2 240 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 FOXO6A8MYZ6 492 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 STMND1H3BQB6 276 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 PGRMC2O15173 223 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 MSH4O15457 936 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 TSPAN9O75954 239 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 PNPP00491 289 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 ZNF3P17036 446 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 TARSP26639 723 aaKnown RBP6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 EIF2DP41214 584 aaKnown RBP6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 PRKAA2P54646 552 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 DOC2AQ14183 400 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 TRIM25Q14258 630 aaKnown RBP6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 ARHGAP44Q17R89 818 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 CFAP221Q4G0U5 840 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 C1orf185Q5T7R7 199 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 PTCHD4Q6ZW05 846 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 H1FNTQ75WM6 255 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 TRAPPC11Q7Z392 1133 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 CEP112Q8N8E3 955 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 FAM76AQ8TAV0 307 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 STK35Q8TDR2 534 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 RAB7BQ96AH8 199 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 C1orf159Q96HA4 380 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 DYDC2Q96IM9 177 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 PRICKLE1Q96MT3 831 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 VCX3BQ9H321 246 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 SLC35D1Q9NTN3 355 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 DNAJC28Q9NX36 388 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 TNFSF13BQ9Y275 285 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 hCG_1809904A0A1W2PP81 198 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 A0A1W2PPE2 198 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 A0A1W2PR64 198 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 GOLGA8IPA6NC78 632 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 GOLGA8JA6NMD2 632 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 EXOC3O60645 756 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 ZC3H11AO75152 810 aaKnown RBP eCLIP6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 AKAP3O75969 853 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 NOL4O94818 638 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 TPBGLP0DKB5 382 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 CCR1P32246 355 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 LUMP51884 338 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 HTRA4P83105 476 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 MAN2A1Q16706 1144 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 SPRED3Q2MJR0 410 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 BBS12Q6ZW61 710 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 RTN4RL1Q86UN2 441 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 FBXO11Q86XK2 927 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 MRPL43Q8N983 215 aaKnown RBP6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 C7orf57Q8NEG2 295 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 OR1N1Q8NGS0 311 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 PGAP3Q96FM1 320 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 ATP6V1G3Q96LB4 118 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 CATSPER2Q96P56 530 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 FAM107BQ9H098 131 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 HAUS4Q9H6D7 363 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 C8orf33Q9H7E9 229 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 FANCEQ9HB96 536 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 RPRD1BQ9NQG5 326 aaKnown RBP6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 PSME2Q9UL46 239 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 WDR37Q9Y2I8 494 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 HIF3AQ9Y2N7 669 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 SAMM50Q9Y512 469 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 IGKV6D-41A0A0C4DH26 115 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 RECQL4O94761 1208 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 C22orf31O95567 290 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 ALDH1A1P00352 501 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 ARP10275 920 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 TYMPP19971 482 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 GGCXP38435 758 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 HAAOP46952 286 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 SCNN1GP51170 649 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 GBX2P52951 348 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 PTPN5P54829 565 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 RIPK1Q13546 671 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 TBC1D25Q3MII6 688 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 SHEQ5VZ18 495 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 KLC3Q6P597 504 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 CPNE8Q86YQ8 564 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 TDRD5Q8NAT2 981 aaKnown RBP6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 CHST14Q8NCH0 376 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 IL31RAQ8NI17 732 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 PMEPA1Q969W9 287 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 CCDC51Q96ER9 411 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms