RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 PCDH15Q96QU1 1955 aa15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 CYP1A1P04798 512 aaPredicted RBP15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 CXCR3P49682 368 aa15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 SULT1E1P49888 294 aa15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 IRX4P78413 519 aa15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 FMO1Q01740 532 aa15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 UBXN1Q04323 297 aa15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 AUHQ13825 339 aaKnown RBP15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 HNRNPA1L2Q32P51 320 aaKnown RBP15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 C5orf22Q49AR2 442 aa15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 SYCP2LQ5T4T6 812 aa15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 ACBD5Q5T8D3 534 aaPredicted RBP15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 NAA35Q5VZE5 725 aa15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 FBXL22Q6P050 247 aa15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 MMS22LQ6ZRQ5 1243 aa15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 SND1Q7KZF4 910 aaKnown RBP eCLIP15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 ZNF366Q8N895 744 aa15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 CADM4Q8NFZ8 388 aa15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 SLC20A1Q8WUM9 679 aa15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 CPA5Q8WXQ8 436 aa15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 MRGPRX3Q96LB0 322 aa15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 NUP58Q9BVL2 599 aa15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 ADAM33Q9BZ11 813 aa15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 PCED1AQ9H1Q7 454 aa15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 TMEM9BQ9NQ34 198 aa15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 ARHGEF38Q9NXL2 777 aa15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 TMEM59LQ9UK28 342 aa15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 HS3ST4Q9Y661 456 aa15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 ITIH6Q6UXX5 1313 aa15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 ATXN2Q99700 1313 aaKnown RBP15.35■□□□□ 0.05
SMIM11A-203ENST00000399299 CDX4O14627 284 aaPredicted RBP15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 PAGE1O75459 146 aa15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 SERPINF2P08697 491 aa15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 CHRNB2P17787 502 aa15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 MMP8P22894 467 aa15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 FLT3P36888 993 aa15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 PLK1P53350 603 aa15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 RNASE9P60153 205 aaKnown RBP15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 ECT2LQ008S8 904 aa15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 DEUP1Q05D60 604 aa15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 SULT2A1Q06520 285 aa15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 ANO6Q4KMQ2 910 aa15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 PPM1JQ5JR12 505 aa15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 WDR45BQ5MNZ6 344 aa15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 BNIPLQ7Z465 357 aa15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 DEFB119Q8N690 84 aa15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 DNASE2BQ8WZ79 361 aa15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 PCMTD1Q96MG8 357 aaPredicted RBP15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 RPRD1AQ96P16 312 aaPredicted RBP15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 PPP1R9BQ96SB3 815 aa15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 TBCBQ99426 244 aa15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 GPR174Q9BXC1 333 aa15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 WDCPQ9H6R7 721 aa15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 CAPN10Q9HC96 672 aa15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 SUSD2Q9UGT4 822 aa15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 VANGL2Q9ULK5 521 aa15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 SLC6A14Q9UN76 642 aa15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 ERVW-1Q9UQF0 538 aa15.34■□□□□ 0.05
SMIM11A-203ENST00000399299 DOCK4Q8N1I0 1966 aa15.33■□□□□ 0.05
SMIM11A-203ENST00000399299 TARSL2A2RTX5 802 aaKnown RBP15.33■□□□□ 0.04
SMIM11A-203ENST00000399299 C4orf47A7E2U8 309 aa15.33■□□□□ 0.04
SMIM11A-203ENST00000399299 GOLGA8SH3BPF8 625 aa15.33■□□□□ 0.04
SMIM11A-203ENST00000399299 CLDN11O75508 207 aa15.33■□□□□ 0.04
SMIM11A-203ENST00000399299 ATP1A3P13637 1013 aa15.33■□□□□ 0.04
SMIM11A-203ENST00000399299 TFE3P19532 575 aaPredicted RBP15.33■□□□□ 0.04
SMIM11A-203ENST00000399299 VASPP50552 380 aaPredicted RBP15.33■□□□□ 0.04
SMIM11A-203ENST00000399299 GSCP56915 257 aaPredicted RBP15.33■□□□□ 0.04
SMIM11A-203ENST00000399299 RPS14P62263 151 aaKnown RBP15.33■□□□□ 0.04
SMIM11A-203ENST00000399299 CENPCQ03188 943 aa15.33■□□□□ 0.04
SMIM11A-203ENST00000399299 TTC31Q49AM3 519 aaPredicted RBP15.33■□□□□ 0.04
SMIM11A-203ENST00000399299 C2CD6Q53TS8 623 aa15.33■□□□□ 0.04
SMIM11A-203ENST00000399299 DAB2IPQ5VWQ8 1189 aa15.33■□□□□ 0.04
SMIM11A-203ENST00000399299 RNF219Q5W0B1 726 aaPredicted RBP15.33■□□□□ 0.04
SMIM11A-203ENST00000399299 ZNF776Q68DI1 518 aaPredicted RBP15.33■□□□□ 0.04
SMIM11A-203ENST00000399299 CXorf57Q6NSI4 855 aaKnown RBP15.33■□□□□ 0.04
SMIM11A-203ENST00000399299 CIR1Q86X95 450 aaPredicted RBP15.33■□□□□ 0.04
SMIM11A-203ENST00000399299 CACUL1Q86Y37 369 aa15.33■□□□□ 0.04
SMIM11A-203ENST00000399299 APCDD1Q8J025 514 aa15.33■□□□□ 0.04
SMIM11A-203ENST00000399299 IGSF8Q969P0 613 aa15.33■□□□□ 0.04
SMIM11A-203ENST00000399299 TKTL2Q9H0I9 626 aa15.33■□□□□ 0.04
SMIM11A-203ENST00000399299 RSPH9Q9H1X1 276 aaPredicted RBP15.33■□□□□ 0.04
SMIM11A-203ENST00000399299 SCML1Q9UN30 329 aa15.33■□□□□ 0.04
SMIM11A-203ENST00000399299 NUMA1Q14980 2115 aa15.32■□□□□ 0.04
SMIM11A-203ENST00000399299 ASCC3Q8N3C0 2202 aaKnown RBP15.32■□□□□ 0.04
SMIM11A-203ENST00000399299 EDDM13A0A1B0GTR0 161 aa15.32■□□□□ 0.04
SMIM11A-203ENST00000399299 SMTNL1A8MU46 457 aa15.32■□□□□ 0.04
SMIM11A-203ENST00000399299 I6L893 689 aaPredicted RBP15.32■□□□□ 0.04
SMIM11A-203ENST00000399299 ENDOD1O94919 500 aa15.32■□□□□ 0.04
SMIM11A-203ENST00000399299 ADCY5O95622 1261 aa15.32■□□□□ 0.04
SMIM11A-203ENST00000399299 DNTTP04053 509 aa15.32■□□□□ 0.04
SMIM11A-203ENST00000399299 CFIP05156 583 aa15.32■□□□□ 0.04
SMIM11A-203ENST00000399299 UNGP13051 313 aaPredicted RBP15.32■□□□□ 0.04
SMIM11A-203ENST00000399299 GNSP15586 552 aa15.32■□□□□ 0.04
SMIM11A-203ENST00000399299 PDGFRAP16234 1089 aa15.32■□□□□ 0.04
SMIM11A-203ENST00000399299 ENGP17813 658 aa15.32■□□□□ 0.04
SMIM11A-203ENST00000399299 CDH4P55283 916 aa15.32■□□□□ 0.04
SMIM11A-203ENST00000399299 GFPT1Q06210 699 aaPredicted RBP15.32■□□□□ 0.04
SMIM11A-203ENST00000399299 TRNP1Q6NT89 227 aa15.32■□□□□ 0.04
SMIM11A-203ENST00000399299 CAVIN1Q6NZI2 390 aaKnown RBP15.32■□□□□ 0.04
SMIM11A-203ENST00000399299 DHX40Q8IX18 779 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms