RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 ADCY4Q8NFM4 1077 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 MIPOL1Q8TD10 442 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 MARK4Q96L34 752 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 SYT17Q9BSW7 474 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 MTMR10Q9NXD2 777 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 CEPT1Q9Y6K0 416 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 GLDCP23378 1020 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 MPSTP25325 297 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 TPP2P29144 1249 aaPredicted RBP14.31□□□□□ -0.12
APOB-202ENST00000399256 EPHA3P29320 983 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 CCR10P46092 362 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 SERPINB8P50452 374 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 IRF9Q00978 393 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 PPP2R5DQ14738 602 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 NRF1Q16656 503 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 FAM156AQ8NDB6 213 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 DDI1Q8WTU0 396 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 HSPBAP1Q96EW2 488 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 ZBED3Q96IU2 234 aaPredicted RBP14.31□□□□□ -0.12
APOB-202ENST00000399256 KLHL32Q96NJ5 620 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 FERMT1Q9BQL6 677 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 DHX35Q9H5Z1 703 aaKnown RBP14.31□□□□□ -0.12
APOB-202ENST00000399256 SBF1O95248 1867 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 CHRNGP07510 517 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 CDH2P19022 906 aaPredicted RBP14.31□□□□□ -0.12
APOB-202ENST00000399256 DPP6P42658 865 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 GTF2A2P52657 109 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 NR1H2P55055 460 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 PPIDQ08752 370 aaKnown RBP14.31□□□□□ -0.12
APOB-202ENST00000399256 PIGGQ5H8A4 983 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 EEF1DP3Q658K8 133 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 HACE1Q8IYU2 909 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 DCLK2Q8N568 766 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 TMIGD2Q96BF3 282 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 NIFKQ9BYG3 293 aaKnown RBP14.31□□□□□ -0.12
APOB-202ENST00000399256 CAB39LQ9H9S4 337 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 SYBUQ9NX95 663 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 ZNF510Q9Y2H8 683 aa14.31□□□□□ -0.12
APOB-202ENST00000399256 HNRNPCP07910 306 aaKnown RBP eCLIP14.3□□□□□ -0.121e-7■■□□□ 11.4
APOB-202ENST00000399256 SDC4P31431 198 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 DLG2Q15700 870 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 INSCQ1MX18 579 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 ZFP1Q6P2D0 407 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 CNKSR2Q8WXI2 1034 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 ARNTL2Q8WYA1 636 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 LZICQ8WZA0 190 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 ZNF512Q96ME7 567 aaPredicted RBP14.3□□□□□ -0.12
APOB-202ENST00000399256 PCYT2Q99447 389 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 ZNF670Q9BS34 389 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 SLC4A5Q9BY07 1137 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 TSPAN16Q9UKR8 245 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 RGSL1A5PLK6 1076 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 XPO1O14980 1071 aaKnown RBP14.3□□□□□ -0.12
APOB-202ENST00000399256 LTFP02788 710 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 PGAM1P18669 254 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 RPS12P25398 132 aaKnown RBP14.3□□□□□ -0.12
APOB-202ENST00000399256 EFNA5P52803 228 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 LAMTOR4Q0VGL1 99 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 SH3D19Q5HYK7 790 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 TMEM198Q66K66 360 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 C4orf22Q6V702 233 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 PTAR1Q7Z6K3 402 aaPredicted RBP14.3□□□□□ -0.12
APOB-202ENST00000399256 C12orf29Q8N999 325 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 ZSCAN18Q8TBC5 510 aaPredicted RBP14.3□□□□□ -0.12
APOB-202ENST00000399256 NLRP7Q8WX94 980 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 QKIQ96PU8 341 aaKnown RBP eCLIP14.3□□□□□ -0.12
APOB-202ENST00000399256 SEMA6AQ9H2E6 1030 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 PGAP2Q9UHJ9 254 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.3□□□□□ -0.12
APOB-202ENST00000399256 B4GALT4O60513 344 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 GJB1P08034 283 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 P4HA1P13674 534 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 PTPN1P18031 435 aaKnown RBP14.3□□□□□ -0.12
APOB-202ENST00000399256 OLIG2Q13516 323 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 LSM12Q3MHD2 195 aaKnown RBP14.3□□□□□ -0.12
APOB-202ENST00000399256 CYS1Q717R9 158 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 COLGALT1Q8NBJ5 622 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 LGMNQ99538 433 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 CCT7Q99832 543 aa14.3□□□□□ -0.12
APOB-202ENST00000399256 G3V2L1 256 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 ATP6V1G1O75348 118 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 RNASEH2AO75792 299 aaKnown RBP14.29□□□□□ -0.12
APOB-202ENST00000399256 VDRP11473 427 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 PSMC3P17980 439 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 ZNF280AP59817 542 aaPredicted RBP14.29□□□□□ -0.12
APOB-202ENST00000399256 TARBP2Q15633 366 aaKnown RBP14.29□□□□□ -0.12
APOB-202ENST00000399256 CCDC153Q494R4 210 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 NXNQ6DKJ4 435 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 MPZL3Q6UWV2 235 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 TRIM67Q6ZTA4 783 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 SCUBE3Q8IX30 993 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 TRIML2Q8N7C3 387 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 TSPAN14Q8NG11 270 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 GRIN3AQ8TCU5 1115 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 WDR41Q9HAD4 459 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 GBA2Q9HCG7 927 aaPredicted RBP14.29□□□□□ -0.12
APOB-202ENST00000399256 MYOZ2Q9NPC6 264 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 HES2Q9Y543 173 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 MYO18AQ92614 2054 aaKnown RBP14.29□□□□□ -0.12
APOB-202ENST00000399256 PRSS51A0A1B0GVH4 220 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms