RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 CRELD1Q96HD1 420 aa12.47□□□□□ -0.41
TFF3-202ENST00000398431 ELF4Q99607 663 aaPredicted RBP12.47□□□□□ -0.41
TFF3-202ENST00000398431 TSG101Q99816 390 aa12.47□□□□□ -0.41
TFF3-202ENST00000398431 MIS12Q9H081 205 aa12.47□□□□□ -0.41
TFF3-202ENST00000398431 RMND1Q9NWS8 449 aa12.47□□□□□ -0.41
TFF3-202ENST00000398431 TLR6Q9Y2C9 796 aa12.47□□□□□ -0.41
TFF3-202ENST00000398431 DOCK9Q9BZ29 2069 aa12.47□□□□□ -0.41
TFF3-202ENST00000398431 CELSR3Q9NYQ7 3312 aa12.47□□□□□ -0.41
TFF3-202ENST00000398431 ITIH6Q6UXX5 1313 aa12.46□□□□□ -0.41
TFF3-202ENST00000398431 M0QYV0 167 aa12.46□□□□□ -0.41
TFF3-202ENST00000398431 FBXO21O94952 628 aa12.46□□□□□ -0.41
TFF3-202ENST00000398431 LUC7L3O95232 432 aaKnown RBP12.46□□□□□ -0.41
TFF3-202ENST00000398431 SRPRAP08240 638 aaKnown RBP12.46□□□□□ -0.41
TFF3-202ENST00000398431 CD44P16070 742 aaKnown RBP12.46□□□□□ -0.41
TFF3-202ENST00000398431 CLDN6P56747 220 aa12.46□□□□□ -0.41
TFF3-202ENST00000398431 ST8SIA6P61647 398 aa12.46□□□□□ -0.41
TFF3-202ENST00000398431 LRRC63Q05C16 580 aa12.46□□□□□ -0.41
TFF3-202ENST00000398431 EIF4EBP2Q13542 120 aaPredicted RBP12.46□□□□□ -0.41
TFF3-202ENST00000398431 CCDC157Q569K6 752 aa12.46□□□□□ -0.41
TFF3-202ENST00000398431 RRAGAQ7L523 313 aa12.46□□□□□ -0.41
TFF3-202ENST00000398431 ADAT2Q7Z6V5 191 aaKnown RBP12.46□□□□□ -0.41
TFF3-202ENST00000398431 ARHGEF19Q8IW93 802 aa12.46□□□□□ -0.41
TFF3-202ENST00000398431 ZNF557Q8N988 423 aaPredicted RBP12.46□□□□□ -0.41
TFF3-202ENST00000398431 OR2T34Q8NGX1 318 aa12.46□□□□□ -0.41
TFF3-202ENST00000398431 ADAM32Q8TC27 787 aa12.46□□□□□ -0.41
TFF3-202ENST00000398431 SAP25Q8TEE9 199 aa12.46□□□□□ -0.41
TFF3-202ENST00000398431 LRIG1Q96JA1 1093 aa12.46□□□□□ -0.41
TFF3-202ENST00000398431 RPL10LQ96L21 214 aaKnown RBP12.46□□□□□ -0.41
TFF3-202ENST00000398431 NT5C1BQ96P26 610 aa12.46□□□□□ -0.41
TFF3-202ENST00000398431 ACE2Q9BYF1 805 aaPredicted RBP12.46□□□□□ -0.41
TFF3-202ENST00000398431 METTL14Q9HCE5 456 aaKnown RBP12.46□□□□□ -0.41
TFF3-202ENST00000398431 CHMP5Q9NZZ3 219 aa12.46□□□□□ -0.41
TFF3-202ENST00000398431 CNTN6Q9UQ52 1028 aa12.46□□□□□ -0.41
TFF3-202ENST00000398431 COL5A1P20908 1838 aaPredicted RBP12.46□□□□□ -0.42
TFF3-202ENST00000398431 GOT1P17174 413 aa12.45□□□□□ -0.42
TFF3-202ENST00000398431 CD38P28907 300 aa12.45□□□□□ -0.42
TFF3-202ENST00000398431 CCR5P51681 352 aa12.45□□□□□ -0.42
TFF3-202ENST00000398431 METAP1P53582 386 aa12.45□□□□□ -0.42
TFF3-202ENST00000398431 C21orf59P57076 290 aa12.45□□□□□ -0.42
TFF3-202ENST00000398431 PITX1P78337 314 aaPredicted RBP12.45□□□□□ -0.42
TFF3-202ENST00000398431 BNIP3Q12983 259 aa12.45□□□□□ -0.42
TFF3-202ENST00000398431 DNAJC3Q13217 504 aa12.45□□□□□ -0.42
TFF3-202ENST00000398431 NNTQ13423 1086 aa12.45□□□□□ -0.42
TFF3-202ENST00000398431 STILQ15468 1287 aa12.45□□□□□ -0.42
TFF3-202ENST00000398431 BEND5Q7L4P6 421 aa12.45□□□□□ -0.42
TFF3-202ENST00000398431 TAC4Q86UU9 113 aa12.45□□□□□ -0.42
TFF3-202ENST00000398431 TMPRSS12Q86WS5 348 aa12.45□□□□□ -0.42
TFF3-202ENST00000398431 STK40Q8N2I9 435 aa12.45□□□□□ -0.42
TFF3-202ENST00000398431 PPM1KQ8N3J5 372 aa12.45□□□□□ -0.42
TFF3-202ENST00000398431 EHBP1Q8NDI1 1231 aa12.45□□□□□ -0.42
TFF3-202ENST00000398431 TSC1Q92574 1164 aa12.45□□□□□ -0.42
TFF3-202ENST00000398431 FAM131CQ96AQ9 280 aa12.45□□□□□ -0.42
TFF3-202ENST00000398431 KREMEN1Q96MU8 473 aa12.45□□□□□ -0.42
TFF3-202ENST00000398431 OMDQ99983 421 aa12.45□□□□□ -0.42
TFF3-202ENST00000398431 DDX50Q9BQ39 737 aaKnown RBP12.45□□□□□ -0.42
TFF3-202ENST00000398431 SLC4A5Q9BY07 1137 aa12.45□□□□□ -0.42
TFF3-202ENST00000398431 ARHGAP20Q9P2F6 1191 aa12.45□□□□□ -0.42
TFF3-202ENST00000398431 FTSJ1Q9UET6 329 aa12.45□□□□□ -0.42
TFF3-202ENST00000398431 CYTH4Q9UIA0 394 aa12.45□□□□□ -0.42
TFF3-202ENST00000398431 FZD4Q9ULV1 537 aa12.45□□□□□ -0.42
TFF3-202ENST00000398431 PCDHGA1Q9Y5H4 931 aa12.45□□□□□ -0.42
TFF3-202ENST00000398431 EDDM13A0A1B0GTR0 161 aa12.44□□□□□ -0.42
TFF3-202ENST00000398431 LRRC72A6NJI9 287 aa12.44□□□□□ -0.42
TFF3-202ENST00000398431 E9PAM4 449 aa12.44□□□□□ -0.42
TFF3-202ENST00000398431 TLR4O00206 839 aa12.44□□□□□ -0.42
TFF3-202ENST00000398431 PLK4O00444 970 aa12.44□□□□□ -0.42
TFF3-202ENST00000398431 ENC1O14682 589 aa12.44□□□□□ -0.42
TFF3-202ENST00000398431 RNASEH1O60930 286 aaKnown RBP12.44□□□□□ -0.42
TFF3-202ENST00000398431 RNASEH2AO75792 299 aaKnown RBP12.44□□□□□ -0.42
TFF3-202ENST00000398431 LDOC1O95751 146 aaPredicted RBP12.44□□□□□ -0.42
TFF3-202ENST00000398431 IGLV3-25P01717 112 aa12.44□□□□□ -0.42
TFF3-202ENST00000398431 VAV1P15498 845 aa12.44□□□□□ -0.42
TFF3-202ENST00000398431 TACR2P21452 398 aa12.44□□□□□ -0.42
TFF3-202ENST00000398431 MZF1P28698 734 aaPredicted RBP12.44□□□□□ -0.42
TFF3-202ENST00000398431 DRD3P35462 400 aa12.44□□□□□ -0.42
TFF3-202ENST00000398431 STK19P49842 368 aaPredicted RBP12.44□□□□□ -0.42
TFF3-202ENST00000398431 PLK1P53350 603 aa12.44□□□□□ -0.42
TFF3-202ENST00000398431 ADPRHP54922 357 aa12.44□□□□□ -0.42
TFF3-202ENST00000398431 NUCB2P80303 420 aa12.44□□□□□ -0.42
TFF3-202ENST00000398431 ECT2LQ008S8 904 aa12.44□□□□□ -0.42
TFF3-202ENST00000398431 CDH18Q13634 790 aa12.44□□□□□ -0.42
TFF3-202ENST00000398431 ZC3H12AQ5D1E8 599 aaKnown RBP12.44□□□□□ -0.42
TFF3-202ENST00000398431 RAP1GAP2Q684P5 730 aa12.44□□□□□ -0.42
TFF3-202ENST00000398431 ISM2Q6H9L7 571 aa12.44□□□□□ -0.42
TFF3-202ENST00000398431 DENND1BQ6P3S1 775 aa12.44□□□□□ -0.42
TFF3-202ENST00000398431 SND1Q7KZF4 910 aaKnown RBP eCLIP12.44□□□□□ -0.42
TFF3-202ENST00000398431 KANSL1Q7Z3B3 1105 aa12.44□□□□□ -0.42
TFF3-202ENST00000398431 SPATS2Q86XZ4 545 aaKnown RBP12.44□□□□□ -0.42
TFF3-202ENST00000398431 LGI2Q8N0V4 545 aa12.44□□□□□ -0.42
TFF3-202ENST00000398431 STK32AQ8WU08 396 aa12.44□□□□□ -0.42
TFF3-202ENST00000398431 DHTKD1Q96HY7 919 aaPredicted RBP12.44□□□□□ -0.42
TFF3-202ENST00000398431 CNDP2Q96KP4 475 aaKnown RBP12.44□□□□□ -0.42
TFF3-202ENST00000398431 CEP63Q96MT8 703 aa12.44□□□□□ -0.42
TFF3-202ENST00000398431 SERPINB11Q96P15 392 aa12.44□□□□□ -0.42
TFF3-202ENST00000398431 PRMT1Q99873 361 aaKnown RBP12.44□□□□□ -0.42
TFF3-202ENST00000398431 ATP6V1DQ9Y5K8 247 aa12.44□□□□□ -0.42
TFF3-202ENST00000398431 MYLKQ15746 1914 aa12.44□□□□□ -0.42
TFF3-202ENST00000398431 PPP1R3GB7ZBB8 358 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 P4HA2O15460 535 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 LATO43561 262 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms