RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 CXCL11O14625 94 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 PIGNO95427 931 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 ITGBL1O95965 494 aaPredicted RBP5.04□□□□□ -1.6
SMAD4-202ENST00000398417 ITGA2BP08514 1039 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 OR4Q2P0C623 313 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 TGFB3P10600 412 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 L1CAMP32004 1257 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 PTPN7P35236 360 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 TBL3Q12788 808 aaKnown RBP5.04□□□□□ -1.6
SMAD4-202ENST00000398417 BIRC2Q13490 618 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 AP1ARQ63HQ0 302 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 ANKLE1Q8NAG6 615 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 CMASQ8NFW8 434 aaPredicted RBP5.04□□□□□ -1.6
SMAD4-202ENST00000398417 PIP4K2CQ8TBX8 421 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 FNIP1Q8TF40 1166 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 CDH19Q9H159 772 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 VCX3BQ9H321 246 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 MROH8Q9H579 483 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 FZD10Q9ULW2 581 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 PLLPQ9Y342 182 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 SLC15A5A6NIM6 579 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 RECQL4O94761 1208 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 TPBGLP0DKB5 382 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 ERCC2P18074 760 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 LRRC74BQ6ZQY2 392 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 SNX31Q8N9S9 440 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 ANKRD52Q8NB46 1076 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 SHKBP1Q8TBC3 707 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 ZNF398Q8TD17 642 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 SIGLEC10Q96LC7 697 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 TRPV6Q9H1D0 765 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 EFR3BQ9Y2G0 817 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 A0A0A0MRY4 1105 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 DNAJC6O75061 913 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 POMCP01189 267 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 ATF4P18848 351 aaPredicted RBP5.04□□□□□ -1.6
SMAD4-202ENST00000398417 ABCE1P61221 599 aaKnown RBP5.04□□□□□ -1.6
SMAD4-202ENST00000398417 MED21Q13503 144 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 CYTH1Q15438 398 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 DGKDQ16760 1214 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 SPATA13Q96N96 652 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 SNX15Q9NRS6 342 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 PLA2G4CQ9UP65 541 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 ARFGEF2Q9Y6D5 1785 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 C17orf102A2RUQ5 167 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 E7ENQ6 273 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 TRIM13O60858 407 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 MSR1P21757 451 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 PIK3R1P27986 724 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 SERPINB8P50452 374 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 CCNHP51946 323 aaPredicted RBP5.04□□□□□ -1.6
SMAD4-202ENST00000398417 MRPS5P82675 430 aaKnown RBP5.04□□□□□ -1.6
SMAD4-202ENST00000398417 SOX4Q06945 474 aaPredicted RBP5.04□□□□□ -1.6
SMAD4-202ENST00000398417 KLF10Q13118 480 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 BLMHQ13867 455 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 NOTUMQ6P988 496 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 TMC7Q7Z402 723 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 CAND1Q86VP6 1230 aaKnown RBP5.04□□□□□ -1.6
SMAD4-202ENST00000398417 HPS6Q86YV9 775 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 CCNL2Q96S94 520 aaPredicted RBP5.04□□□□□ -1.6
SMAD4-202ENST00000398417 PNPLA8Q9NP80 782 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 DTLQ9NZJ0 730 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 ZNF212Q9UDV6 495 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 RP1P56715 2156 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 LTN1O94822 1766 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 BCLAF3A2AJT9 711 aaKnown RBP5.04□□□□□ -1.6
SMAD4-202ENST00000398417 SOCS7O14512 581 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 DPYSL4O14531 572 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 ZBTB24O43167 697 aaPredicted RBP5.04□□□□□ -1.6
SMAD4-202ENST00000398417 PLIN3O60664 434 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 PMPCBO75439 489 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 RFPL1O75677 317 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 ESRRBO95718 433 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 GNAZP19086 355 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 ATP6V1C1P21283 382 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 MAPK1P28482 360 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 IRF9Q00978 393 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 ARHGAP1Q07960 439 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 USP4Q13107 963 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 PDAP1Q13442 181 aaKnown RBP5.04□□□□□ -1.6
SMAD4-202ENST00000398417 SLC9B1Q4ZJI4 515 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 LRRC8BQ6P9F7 803 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 SPNS2Q8IVW8 549 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 ZNF567Q8N184 647 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 FLCNQ8NFG4 579 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 PTCD3Q96EY7 689 aaKnown RBP5.04□□□□□ -1.6
SMAD4-202ENST00000398417 APBA2Q99767 749 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 ECSITQ9BQ95 431 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 ZNF670Q9BS34 389 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 AK5Q9Y6K8 562 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 FAM159BA6NKW6 160 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 HACD1B0YJ81 288 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 SPTLC1O15269 473 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 TGDSO95455 350 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 LINGO3P0C6S8 592 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 SKIV2L2P42285 1042 aaKnown RBP5.04□□□□□ -1.6
SMAD4-202ENST00000398417 PSEN2P49810 448 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 IDH3AP50213 366 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 CLDN10P78369 228 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 GRSF1Q12849 480 aaKnown RBP eCLIP5.04□□□□□ -1.63e-6■■■■□ 22.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms