RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 RANBP10Q6VN20 620 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 RNF165Q6ZSG1 346 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 CCT6BQ92526 530 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 METTL2AQ96IZ6 378 aaKnown RBP6.01□□□□□ -1.45
PTPRD-206ENST00000397617 CYP2S1Q96SQ9 504 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 GBA3Q9H227 469 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 DDIT4Q9NX09 232 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 ILVBLA1L0T0 632 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 FGFR1P11362 822 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 KRT10P13645 584 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 ALOX15P16050 662 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-206ENST00000397617 OGNP20774 298 aaKnown RBP6.01□□□□□ -1.45
PTPRD-206ENST00000397617 CMPK2Q5EBM0 449 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 AARS2Q5JTZ9 985 aaKnown RBP6.01□□□□□ -1.45
PTPRD-206ENST00000397617 LHX8Q68G74 356 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 SH2D5Q6ZV89 423 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 WDR75Q8IWA0 830 aaKnown RBP6.01□□□□□ -1.45
PTPRD-206ENST00000397617 FAM126BQ8IXS8 530 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 NUP93Q8N1F7 819 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 PSKH2Q96QS6 385 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 PAFAH2Q99487 392 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 DHX35Q9H5Z1 703 aaKnown RBP6.01□□□□□ -1.45
PTPRD-206ENST00000397617 NMRK2Q9NPI5 230 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 CASS4Q9NQ75 786 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 ATMINO43313 823 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-206ENST00000397617 TMEM63AO94886 807 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 FYNP06241 537 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 LAG3P18627 525 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 CCR3P51677 355 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 CDH8P55286 799 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 SATB1Q01826 763 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 UBE3AQ05086 875 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 CACNB2Q08289 660 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-206ENST00000397617 LRRC8DQ7L1W4 858 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 ADGRG6Q86SQ4 1221 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 C14orf80Q86SX3 495 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 FAM9CQ8IZT9 166 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 MRRFQ96E11 262 aaKnown RBP6.01□□□□□ -1.45
PTPRD-206ENST00000397617 PCED1BQ96HM7 432 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 EPC1Q9H2F5 836 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 OR12D3Q9UGF7 316 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 KLHL33A6NCF5 533 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 ADIGQ0VDE8 80 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 SEPT7Q16181 437 aaKnown RBP6.01□□□□□ -1.45
PTPRD-206ENST00000397617 RABGAP1LQ5R372 815 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 C3orf62Q6ZUJ4 267 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 TMEM192Q8IY95 271 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 AFAP1L2Q8N4X5 818 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 STKLD1Q8NE28 680 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 RAET1EQ8TD07 263 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 MZB1Q8WU39 189 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 MRPL40Q9NQ50 206 aaKnown RBP6.01□□□□□ -1.45
PTPRD-206ENST00000397617 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.01□□□□□ -1.45
PTPRD-206ENST00000397617 RABGEF1Q9UJ41 708 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 APOBEC2Q9Y235 224 aaKnown RBP6.01□□□□□ -1.45
PTPRD-206ENST00000397617 MTCL1Q9Y4B5 1905 aaKnown RBP6.01□□□□□ -1.45
PTPRD-206ENST00000397617 H7C0S8 307 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 I3L4J1 428 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 PYGBP11216 843 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 LIMK2P53671 638 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 WSCD1Q658N2 575 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 FBXO22Q8NEZ5 403 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 LRRC8CQ8TDW0 803 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 ADAM2Q99965 735 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 HEATR9A2RTY3 570 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 ARHGAP42A6NI28 874 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 HHLA1C9JL84 531 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 LMNAP02545 664 aaKnown RBP6.01□□□□□ -1.45
PTPRD-206ENST00000397617 CSNK1DP48730 415 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 APLP1P51693 650 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 BTBD8Q5XKL5 378 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 BHLHA9Q7RTU4 235 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 TMEM126BQ8IUX1 230 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 P2RY11Q96G91 374 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 FEM1CQ96JP0 617 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 TLR8Q9NR97 1041 aaKnown RBP6.01□□□□□ -1.45
PTPRD-206ENST00000397617 THAP1Q9NVV9 213 aa6.01□□□□□ -1.45
PTPRD-206ENST00000397617 RRP15Q9Y3B9 282 aaKnown RBP6.01□□□□□ -1.45
PTPRD-206ENST00000397617 TCRBV7S2A1N4TA0A589 114 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 SPDYE4A6NLX3 237 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 PI4K2BG5E9Z4 385 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 H0YHG0 523 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 DDX6P26196 483 aaKnown RBP eCLIP6□□□□□ -1.45
PTPRD-206ENST00000397617 CRABP2P29373 138 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 ACADVLP49748 655 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 VEPH1Q14D04 833 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 TIGD5Q53EQ6 642 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 GRTP1Q5TC63 336 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 GALNT13Q8IUC8 556 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 ZNF473Q8WTR7 871 aaKnown RBP6□□□□□ -1.45
PTPRD-206ENST00000397617 TTPALQ9BTX7 342 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 ZCWPW1Q9H0M4 648 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 TUBGCP4Q9UGJ1 667 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 DENND4CQ5VZ89 1909 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 CUL9Q8IWT3 2517 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 RP1L1Q8IWN7 2480 aaPredicted RBP6□□□□□ -1.45
PTPRD-206ENST00000397617 C11orf97A0A1B0GVM6 126 aaPredicted RBP6□□□□□ -1.45
PTPRD-206ENST00000397617 DRGXA6NNA5 263 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 H3BMM5 538 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 EEF2KO00418 725 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms