RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 TMEM265A0A087WTH1 108 aa28.27■■■□□ 2.12
CPNE1-203ENST00000397442 LEFTY2O00292 366 aa28.27■■■□□ 2.12
CPNE1-203ENST00000397442 DYNC1I1O14576 645 aa28.27■■■□□ 2.12
CPNE1-203ENST00000397442 ETS1P14921 441 aa28.27■■■□□ 2.12
CPNE1-203ENST00000397442 AVPR1AP37288 418 aa28.27■■■□□ 2.12
CPNE1-203ENST00000397442 ADAM15Q13444 863 aa28.27■■■□□ 2.12
CPNE1-203ENST00000397442 TRIP13Q15645 432 aaPredicted RBP28.27■■■□□ 2.12
CPNE1-203ENST00000397442 AFMIDQ63HM1 303 aa28.27■■■□□ 2.12
CPNE1-203ENST00000397442 GPR149Q86SP6 731 aa28.27■■■□□ 2.12
CPNE1-203ENST00000397442 CIR1Q86X95 450 aaPredicted RBP28.27■■■□□ 2.12
CPNE1-203ENST00000397442 DDX42Q86XP3 938 aaKnown RBP eCLIP28.27■■■□□ 2.12
CPNE1-203ENST00000397442 FAM217AQ8IXS0 508 aa28.27■■■□□ 2.12
CPNE1-203ENST00000397442 IFT20Q8IY31 132 aa28.27■■■□□ 2.12
CPNE1-203ENST00000397442 FAM71DQ8N9W8 422 aa28.27■■■□□ 2.12
CPNE1-203ENST00000397442 USP13Q92995 863 aaPredicted RBP28.27■■■□□ 2.12
CPNE1-203ENST00000397442 CELF6Q96J87 481 aaKnown RBP28.27■■■□□ 2.12
CPNE1-203ENST00000397442 LGMNQ99538 433 aa28.27■■■□□ 2.12
CPNE1-203ENST00000397442 TRIM31Q9BZY9 425 aa28.27■■■□□ 2.12
CPNE1-203ENST00000397442 GFRA2O00451 464 aa28.26■■■□□ 2.12
CPNE1-203ENST00000397442 KRT14P02533 472 aa28.26■■■□□ 2.12
CPNE1-203ENST00000397442 TUBBP07437 444 aa28.26■■■□□ 2.12
CPNE1-203ENST00000397442 IVDP26440 423 aa28.26■■■□□ 2.12
CPNE1-203ENST00000397442 RBL1P28749 1068 aa28.26■■■□□ 2.12
CPNE1-203ENST00000397442 GALNT2Q10471 571 aa28.26■■■□□ 2.12
CPNE1-203ENST00000397442 PDK1Q15118 436 aa28.26■■■□□ 2.12
CPNE1-203ENST00000397442 PRKD1Q15139 912 aaPredicted RBP28.26■■■□□ 2.12
CPNE1-203ENST00000397442 TFAP2DQ7Z6R9 452 aa28.26■■■□□ 2.12
CPNE1-203ENST00000397442 LZTR1Q8N653 840 aa28.26■■■□□ 2.12
CPNE1-203ENST00000397442 RIN3Q8TB24 985 aa28.26■■■□□ 2.12
CPNE1-203ENST00000397442 APOL5Q9BWW9 433 aa28.26■■■□□ 2.12
CPNE1-203ENST00000397442 DPH5Q9H2P9 285 aa28.26■■■□□ 2.12
CPNE1-203ENST00000397442 NOL6Q9H6R4 1146 aaKnown RBP28.26■■■□□ 2.12
CPNE1-203ENST00000397442 ZMYM5Q9UJ78 669 aa28.26■■■□□ 2.12
CPNE1-203ENST00000397442 CDH22Q9UJ99 828 aa28.26■■■□□ 2.12
CPNE1-203ENST00000397442 HACD1B0YJ81 288 aa28.26■■■□□ 2.11
CPNE1-203ENST00000397442 TRDMT1O14717 391 aaKnown RBP28.26■■■□□ 2.11
CPNE1-203ENST00000397442 PRAMEF12O95522 483 aa28.26■■■□□ 2.11
CPNE1-203ENST00000397442 ZSCAN5DPP0CG00 497 aa28.26■■■□□ 2.11
CPNE1-203ENST00000397442 MYBL2P10244 700 aa28.26■■■□□ 2.11
CPNE1-203ENST00000397442 TNFRSF8P28908 595 aa28.26■■■□□ 2.11
CPNE1-203ENST00000397442 STIP1P31948 543 aaKnown RBP28.26■■■□□ 2.11
CPNE1-203ENST00000397442 SGSHP51688 502 aa28.26■■■□□ 2.11
CPNE1-203ENST00000397442 NRLP54845 237 aa28.26■■■□□ 2.11
CPNE1-203ENST00000397442 DRG2P55039 364 aaKnown RBP28.26■■■□□ 2.11
CPNE1-203ENST00000397442 CBX2Q14781 532 aaPredicted RBP28.26■■■□□ 2.11
CPNE1-203ENST00000397442 CDKL3Q8IVW4 592 aaPredicted RBP28.26■■■□□ 2.11
CPNE1-203ENST00000397442 CFAP52Q8N1V2 620 aa28.26■■■□□ 2.11
CPNE1-203ENST00000397442 SH3RF2Q8TEC5 729 aa28.26■■■□□ 2.11
CPNE1-203ENST00000397442 RSAD2Q8WXG1 361 aa28.26■■■□□ 2.11
CPNE1-203ENST00000397442 RTP4Q96DX8 246 aa28.26■■■□□ 2.11
CPNE1-203ENST00000397442 VAV1P15498 845 aa28.25■■■□□ 2.11
CPNE1-203ENST00000397442 RPL21P46778 160 aaKnown RBP28.25■■■□□ 2.11
CPNE1-203ENST00000397442 CARSP49589 748 aaKnown RBP28.25■■■□□ 2.11
CPNE1-203ENST00000397442 CCNI2Q6ZMN8 369 aaPredicted RBP28.25■■■□□ 2.11
CPNE1-203ENST00000397442 UMODL1-AS1Q8N2C9 162 aa28.25■■■□□ 2.11
CPNE1-203ENST00000397442 TFB1MQ8WVM0 346 aaKnown RBP28.25■■■□□ 2.11
CPNE1-203ENST00000397442 TDP1Q9NUW8 608 aa28.25■■■□□ 2.11
CPNE1-203ENST00000397442 LSM7Q9UK45 103 aaKnown RBP28.25■■■□□ 2.11
CPNE1-203ENST00000397442 SNX24Q9Y343 169 aa28.25■■■□□ 2.11
CPNE1-203ENST00000397442 SH3BP1Q9Y3L3 701 aa28.25■■■□□ 2.11
CPNE1-203ENST00000397442 MTCH2Q9Y6C9 303 aa28.25■■■□□ 2.11
CPNE1-203ENST00000397442 ZFP37Q9Y6Q3 630 aaPredicted RBP28.25■■■□□ 2.11
CPNE1-203ENST00000397442 SZT2Q5T011 3432 aa28.25■■■□□ 2.11
CPNE1-203ENST00000397442 CFAP69A5D8W1 941 aa28.24■■■□□ 2.11
CPNE1-203ENST00000397442 NCAM2O15394 837 aa28.24■■■□□ 2.11
CPNE1-203ENST00000397442 IFNB1P01574 187 aa28.24■■■□□ 2.11
CPNE1-203ENST00000397442 H2AFXP16104 143 aaPredicted RBP28.24■■■□□ 2.11
CPNE1-203ENST00000397442 RPS24P62847 133 aaKnown RBP28.24■■■□□ 2.11
CPNE1-203ENST00000397442 ADGRE1Q14246 886 aa28.24■■■□□ 2.11
CPNE1-203ENST00000397442 ANKRD7Q92527 254 aa28.24■■■□□ 2.11
CPNE1-203ENST00000397442 DDX50Q9BQ39 737 aaKnown RBP28.24■■■□□ 2.11
CPNE1-203ENST00000397442 SLC39A8Q9C0K1 460 aa28.24■■■□□ 2.11
CPNE1-203ENST00000397442 PCDH9Q9HC56 1237 aa28.24■■■□□ 2.11
CPNE1-203ENST00000397442 GRHL1Q9NZI5 618 aa28.24■■■□□ 2.11
CPNE1-203ENST00000397442 CLEC1BQ9P126 229 aa28.24■■■□□ 2.11
CPNE1-203ENST00000397442 PPP1R12AO14974 1030 aaPredicted RBP28.23■■■□□ 2.11
CPNE1-203ENST00000397442 KCNN4O15554 427 aa28.23■■■□□ 2.11
CPNE1-203ENST00000397442 ECHS1P30084 290 aa28.23■■■□□ 2.11
CPNE1-203ENST00000397442 GARSP41250 739 aaKnown RBP28.23■■■□□ 2.11
CPNE1-203ENST00000397442 FAM182AQ5T1J6 154 aa28.23■■■□□ 2.11
CPNE1-203ENST00000397442 BBS7Q8IWZ6 715 aa28.23■■■□□ 2.11
CPNE1-203ENST00000397442 CCDC89Q8N998 374 aa28.23■■■□□ 2.11
CPNE1-203ENST00000397442 TTC16Q8NEE8 873 aa28.23■■■□□ 2.11
CPNE1-203ENST00000397442 HDAC11Q96DB2 347 aa28.23■■■□□ 2.11
CPNE1-203ENST00000397442 ASIC3Q9UHC3 531 aa28.23■■■□□ 2.11
CPNE1-203ENST00000397442 NYNRINQ9P2P1 1898 aaKnown RBP28.23■■■□□ 2.11
CPNE1-203ENST00000397442 POU3F3P20264 500 aaPredicted RBP28.23■■■□□ 2.11
CPNE1-203ENST00000397442 MX2P20592 715 aa28.23■■■□□ 2.11
CPNE1-203ENST00000397442 MCM3P25205 808 aa28.23■■■□□ 2.11
CPNE1-203ENST00000397442 PPIDQ08752 370 aaKnown RBP28.23■■■□□ 2.11
CPNE1-203ENST00000397442 RABGAP1LQ5R372 815 aa28.23■■■□□ 2.11
CPNE1-203ENST00000397442 ZNF510Q9Y2H8 683 aa28.23■■■□□ 2.11
CPNE1-203ENST00000397442 NUP210Q8TEM1 1887 aaPredicted RBP28.22■■■□□ 2.11
CPNE1-203ENST00000397442 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.22■■■□□ 2.11
CPNE1-203ENST00000397442 E2F8A0AVK6 867 aa28.22■■■□□ 2.11
CPNE1-203ENST00000397442 SOX1O00570 391 aaPredicted RBP28.22■■■□□ 2.11
CPNE1-203ENST00000397442 TP73O15350 636 aa28.22■■■□□ 2.11
CPNE1-203ENST00000397442 TSPAN3O60637 253 aa28.22■■■□□ 2.11
CPNE1-203ENST00000397442 VPS41P49754 854 aa28.22■■■□□ 2.11
CPNE1-203ENST00000397442 CTC1Q2NKJ3 1217 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms