RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 KMT5BQ4FZB7 885 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 ARHGAP40Q5TG30 622 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 NUGGCQ68CJ6 796 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 MSANTD2Q6P1R3 559 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 IQCHQ86VS3 1027 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 UNC45BQ8IWX7 931 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 LSMEM2Q8N112 164 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 SCML4Q8N228 414 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 HJURPQ8NCD3 748 aaPredicted RBP15.52■□□□□ 0.08
SEC13-206ENST00000397102 FAM129BQ96TA1 746 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 SEMA4CQ9C0C4 833 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 MMRN2Q9H8L6 949 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 CPNE5Q9HCH3 593 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 TMEM8AQ9HCN3 771 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 FAM13BQ9NYF5 915 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 STIM2Q9P246 746 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 TSPAN16Q9UKR8 245 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 ERVW-1Q9UQF0 538 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 PCDHB1Q9Y5F3 818 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 TBC1D3DA0A087WVF3 549 aa15.51■□□□□ 0.07
SEC13-206ENST00000397102 TBC1D3IA0A087WXS9 549 aa15.51■□□□□ 0.07
SEC13-206ENST00000397102 TBC1D3EA0A087X179 549 aa15.51■□□□□ 0.07
SEC13-206ENST00000397102 TBC1D3KA0A087X1G2 549 aa15.51■□□□□ 0.07
SEC13-206ENST00000397102 TYW5A2RUC4 315 aaKnown RBP15.51■□□□□ 0.07
SEC13-206ENST00000397102 TBC1D3FA6NER0 549 aaPredicted RBP15.51■□□□□ 0.07
SEC13-206ENST00000397102 TTC34A8MYJ7 566 aa15.51■□□□□ 0.07
SEC13-206ENST00000397102 TBC1D3LB9A6J9 549 aa15.51■□□□□ 0.07
SEC13-206ENST00000397102 SIGLEC6O43699 453 aa15.51■□□□□ 0.07
SEC13-206ENST00000397102 DXOO77932 396 aaKnown RBP15.51■□□□□ 0.07
SEC13-206ENST00000397102 TBC1D3HP0C7X1 549 aa15.51■□□□□ 0.07
SEC13-206ENST00000397102 KRT13P13646 458 aa15.51■□□□□ 0.07
SEC13-206ENST00000397102 C6P13671 934 aa15.51■□□□□ 0.07
SEC13-206ENST00000397102 NUDT1P36639 197 aa15.51■□□□□ 0.07
SEC13-206ENST00000397102 BST2Q10589 180 aaKnown RBP15.51■□□□□ 0.07
SEC13-206ENST00000397102 ZNF211Q13398 564 aaPredicted RBP15.51■□□□□ 0.07
SEC13-206ENST00000397102 NFIL3Q16649 462 aa15.51■□□□□ 0.07
SEC13-206ENST00000397102 KRT39Q6A163 491 aa15.51■□□□□ 0.07
SEC13-206ENST00000397102 TBC1D3GQ6DHY5 549 aa15.51■□□□□ 0.07
SEC13-206ENST00000397102 TBC1D3CQ6IPX1 549 aa15.51■□□□□ 0.07
SEC13-206ENST00000397102 PRPF39Q86UA1 669 aaKnown RBP15.51■□□□□ 0.07
SEC13-206ENST00000397102 CEP57L1Q8IYX8 460 aa15.51■□□□□ 0.07
SEC13-206ENST00000397102 TBC1D3Q8IZP1 549 aaPredicted RBP15.51■□□□□ 0.07
SEC13-206ENST00000397102 SIX6OS1Q8N1H7 587 aa15.51■□□□□ 0.07
SEC13-206ENST00000397102 FAM181AQ8N9Y4 354 aa15.51■□□□□ 0.07
SEC13-206ENST00000397102 TATDN2Q93075 761 aa15.51■□□□□ 0.07
SEC13-206ENST00000397102 AZIN2Q96A70 460 aa15.51■□□□□ 0.07
SEC13-206ENST00000397102 PRICKLE1Q96MT3 831 aaPredicted RBP15.51■□□□□ 0.07
SEC13-206ENST00000397102 DOCK9Q9BZ29 2069 aa15.5■□□□□ 0.07
SEC13-206ENST00000397102 TRIM38O00635 465 aa15.5■□□□□ 0.07
SEC13-206ENST00000397102 SDC3O75056 442 aa15.5■□□□□ 0.07
SEC13-206ENST00000397102 NR2F2P24468 414 aa15.5■□□□□ 0.07
SEC13-206ENST00000397102 GTF2H1P32780 548 aa15.5■□□□□ 0.07
SEC13-206ENST00000397102 DAOAP59103 153 aa15.5■□□□□ 0.07
SEC13-206ENST00000397102 ERVPABLB-1P60509 514 aa15.5■□□□□ 0.07
SEC13-206ENST00000397102 DAB2P98082 770 aa15.5■□□□□ 0.07
SEC13-206ENST00000397102 CDH18Q13634 790 aa15.5■□□□□ 0.07
SEC13-206ENST00000397102 PITRM1Q5JRX3 1037 aa15.5■□□□□ 0.07
SEC13-206ENST00000397102 NADSYN1Q6IA69 706 aa15.5■□□□□ 0.07
SEC13-206ENST00000397102 FAM186BQ8IYM0 893 aa15.5■□□□□ 0.07
SEC13-206ENST00000397102 STK40Q8N2I9 435 aa15.5■□□□□ 0.07
SEC13-206ENST00000397102 CARNMT1Q8N4J0 409 aa15.5■□□□□ 0.07
SEC13-206ENST00000397102 SNRNP27Q8WVK2 155 aaKnown RBP15.5■□□□□ 0.07
SEC13-206ENST00000397102 KCNE4Q8WWG9 221 aa15.5■□□□□ 0.07
SEC13-206ENST00000397102 KCTD13Q8WZ19 329 aa15.5■□□□□ 0.07
SEC13-206ENST00000397102 TTC9Q92623 222 aa15.5■□□□□ 0.07
SEC13-206ENST00000397102 SEMA4DQ92854 862 aa15.5■□□□□ 0.07
SEC13-206ENST00000397102 FAM131CQ96AQ9 280 aa15.5■□□□□ 0.07
SEC13-206ENST00000397102 INTS4Q96HW7 963 aaKnown RBP15.5■□□□□ 0.07
SEC13-206ENST00000397102 DDX50Q9BQ39 737 aaKnown RBP15.5■□□□□ 0.07
SEC13-206ENST00000397102 KDM4CQ9H3R0 1056 aa15.5■□□□□ 0.07
SEC13-206ENST00000397102 CNGB3Q9NQW8 809 aa15.5■□□□□ 0.07
SEC13-206ENST00000397102 ARHGAP20Q9P2F6 1191 aa15.5■□□□□ 0.07
SEC13-206ENST00000397102 HESX1Q9UBX0 185 aa15.5■□□□□ 0.07
SEC13-206ENST00000397102 CYTH4Q9UIA0 394 aa15.5■□□□□ 0.07
SEC13-206ENST00000397102 DMTF1Q9Y222 760 aa15.5■□□□□ 0.07
SEC13-206ENST00000397102 ATMQ13315 3056 aa15.49■□□□□ 0.07
SEC13-206ENST00000397102 ARHGAP6O43182 974 aa15.49■□□□□ 0.07
SEC13-206ENST00000397102 MOCS3O95396 460 aa15.49■□□□□ 0.07
SEC13-206ENST00000397102 MPOP05164 745 aa15.49■□□□□ 0.07
SEC13-206ENST00000397102 MZF1P28698 734 aaPredicted RBP15.49■□□□□ 0.07
SEC13-206ENST00000397102 DRD3P35462 400 aa15.49■□□□□ 0.07
SEC13-206ENST00000397102 CTSOP43234 321 aaPredicted RBP15.49■□□□□ 0.07
SEC13-206ENST00000397102 RPS24P62847 133 aaKnown RBP15.49■□□□□ 0.07
SEC13-206ENST00000397102 GABREP78334 506 aa15.49■□□□□ 0.07
SEC13-206ENST00000397102 KCNC4Q03721 635 aa15.49■□□□□ 0.07
SEC13-206ENST00000397102 LY6DQ14210 128 aa15.49■□□□□ 0.07
SEC13-206ENST00000397102 ELAVL3Q14576 367 aaKnown RBP15.49■□□□□ 0.07
SEC13-206ENST00000397102 HS1BP3Q53T59 392 aa15.49■□□□□ 0.07
SEC13-206ENST00000397102 SGO2Q562F6 1265 aa15.49■□□□□ 0.07
SEC13-206ENST00000397102 FSCBQ5H9T9 825 aa15.49■□□□□ 0.07
SEC13-206ENST00000397102 CDCP2Q5VXM1 449 aa15.49■□□□□ 0.07
SEC13-206ENST00000397102 RESP18Q5W5W9 173 aa15.49■□□□□ 0.07
SEC13-206ENST00000397102 CCDC117Q8IWD4 279 aaPredicted RBP15.49■□□□□ 0.07
SEC13-206ENST00000397102 OR4C6Q8NH72 309 aa15.49■□□□□ 0.07
SEC13-206ENST00000397102 PTPRN2Q92932 1015 aa15.49■□□□□ 0.07
SEC13-206ENST00000397102 DEPDC7Q96QD5 511 aa15.49■□□□□ 0.07
SEC13-206ENST00000397102 DPH1Q9BZG8 443 aa15.49■□□□□ 0.07
SEC13-206ENST00000397102 SERTAD1Q9UHV2 236 aa15.49■□□□□ 0.07
SEC13-206ENST00000397102 SLCO3A1Q9UIG8 710 aa15.49■□□□□ 0.07
SEC13-206ENST00000397102 SLC7A4O43246 635 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms