RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 MLYCDO95822 493 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 KDELR1P24390 212 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 IRX1P78414 480 aaPredicted RBP15.95■□□□□ 0.14
GNE-202ENST00000396594 MRPL28Q13084 256 aaKnown RBP15.95■□□□□ 0.14
GNE-202ENST00000396594 TMPRSS6Q8IU80 811 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 PHACTR4Q8IZ21 702 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 CNBD2Q96M20 576 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 CCDC3Q9BQI4 270 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 ZYG11BQ9C0D3 744 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 NRDE2Q9H7Z3 1164 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 SYBUQ9NX95 663 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 TBC1D14Q9P2M4 693 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 SLIT2O94813 1529 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 B4GALT4O60513 344 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 SOX6P35712 828 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 TCAIMQ8N3R3 496 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 SLAIN1Q8ND83 568 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 THUMPD3Q9BV44 507 aaKnown RBP15.95■□□□□ 0.14
GNE-202ENST00000396594 NIFKQ9BYG3 293 aaKnown RBP15.95■□□□□ 0.14
GNE-202ENST00000396594 ASAH2Q9NR71 780 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 LRRC4BQ9NT99 713 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 ZBTB14O43829 449 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 CNOT3O75175 753 aaKnown RBP15.95■□□□□ 0.14
GNE-202ENST00000396594 YBX3P16989 372 aaKnown RBP eCLIP15.95■□□□□ 0.144e-6■□□□□ 11.2
GNE-202ENST00000396594 TMEM259Q4ZIN3 620 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 FAM98BQ52LJ0 330 aaKnown RBP15.95■□□□□ 0.14
GNE-202ENST00000396594 SCUBE1Q8IWY4 988 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 SUSD6Q92537 303 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 SPATA5L1Q9BVQ7 753 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 LMO7Q8WWI1 1683 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 CASTOR2A6NHX0 329 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 NUDT2P50583 147 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 TMEM132CQ8N3T6 1108 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 INPP4AQ96PE3 977 aaPredicted RBP15.95■□□□□ 0.14
GNE-202ENST00000396594 VPS45Q9NRW7 570 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 KCNK4Q9NYG8 393 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 PCDHA11Q9Y5I1 949 aa15.95■□□□□ 0.14
GNE-202ENST00000396594 FAM220BPB1ANY3 271 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 MEIS2O14770 477 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 GLT6D1Q7Z4J2 308 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 DEFB132Q7Z7B7 95 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 LPCAT1Q8NF37 534 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 C12orf42Q96LP6 360 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 NFKBIZQ9BYH8 718 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 DPY30Q9C005 99 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 LRRC19Q9H756 370 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 ATP13A3Q9H7F0 1226 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 CORO1CQ9ULV4 474 aaPredicted RBP15.94■□□□□ 0.14
GNE-202ENST00000396594 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.94■□□□□ 0.14
GNE-202ENST00000396594 RNF103O00237 685 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 PLEKP08567 350 aaPredicted RBP15.94■□□□□ 0.14
GNE-202ENST00000396594 SLC2A4P14672 509 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 HLA-DPA1P20036 260 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 KELP23276 732 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 FIBCD1Q8N539 461 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 KYQ8NBH2 561 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 SLC2A14Q8TDB8 520 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 FNIP1Q8TF40 1166 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 ATXN3LQ9H3M9 355 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 PSME2Q9UL46 239 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 WDR47O94967 919 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 ATP4AP20648 1035 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 PPIBP23284 216 aaKnown RBP15.94■□□□□ 0.14
GNE-202ENST00000396594 TMED1Q13445 227 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 LGI2Q8N0V4 545 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 ADAM2Q99965 735 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 BDH2Q9BUT1 245 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 MIEF1Q9NQG6 463 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 C6orf203Q9P0P8 240 aaPredicted RBP15.94■□□□□ 0.14
GNE-202ENST00000396594 UBXN8O00124 270 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 CA12O43570 354 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 ANXA6P08133 673 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 FGFR1P11362 822 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 C1DQ13901 141 aaKnown RBP15.94■□□□□ 0.14
GNE-202ENST00000396594 FAM117BQ6P1L5 589 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 NEK5Q6P3R8 708 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 STAG3L4Q8TBR4 150 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 TATDN2Q93075 761 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 FAM120BQ96EK7 910 aaKnown RBP15.94■□□□□ 0.14
GNE-202ENST00000396594 ADPRHL2Q9NX46 363 aa15.94■□□□□ 0.14
GNE-202ENST00000396594 C2CD2LO14523 706 aa15.93■□□□□ 0.14
GNE-202ENST00000396594 BIRC5O15392 142 aa15.93■□□□□ 0.14
GNE-202ENST00000396594 GCATO75600 419 aa15.93■□□□□ 0.14
GNE-202ENST00000396594 NQO1P15559 274 aaKnown RBP15.93■□□□□ 0.14
GNE-202ENST00000396594 RAP1GAPP47736 663 aa15.93■□□□□ 0.14
GNE-202ENST00000396594 NCF4Q15080 339 aa15.93■□□□□ 0.14
GNE-202ENST00000396594 ZACNQ401N2 412 aa15.93■□□□□ 0.14
GNE-202ENST00000396594 EPC2Q52LR7 807 aa15.93■□□□□ 0.14
GNE-202ENST00000396594 OTOAQ7RTW8 1153 aa15.93■□□□□ 0.14
GNE-202ENST00000396594 ARHGEF19Q8IW93 802 aa15.93■□□□□ 0.14
GNE-202ENST00000396594 ETNPPLQ8TBG4 499 aa15.93■□□□□ 0.14
GNE-202ENST00000396594 MYCBPAPQ8TBZ2 947 aa15.93■□□□□ 0.14
GNE-202ENST00000396594 C10orf88Q9H8K7 445 aa15.93■□□□□ 0.14
GNE-202ENST00000396594 PARVBQ9HBI1 364 aa15.93■□□□□ 0.14
GNE-202ENST00000396594 DDX3XO00571 662 aaKnown RBP eCLIP15.93■□□□□ 0.144e-20■■■■■ 36.3
GNE-202ENST00000396594 RASSF9O75901 435 aa15.93■□□□□ 0.14
GNE-202ENST00000396594 CORO7P57737 925 aa15.93■□□□□ 0.14
GNE-202ENST00000396594 SMIM11AP58511 58 aa15.93■□□□□ 0.14
GNE-202ENST00000396594 HSD17B14Q9BPX1 270 aa15.93■□□□□ 0.14
GNE-202ENST00000396594 CATSPERZQ9NTU4 200 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms