RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 FLNBO75369 2602 aaKnown RBP18.14■□□□□ 0.49
EXOSC3-202ENST00000396521 A0A1W2PP55 124 aa18.13■□□□□ 0.49
EXOSC3-202ENST00000396521 TLR4O00206 839 aa18.13■□□□□ 0.49
EXOSC3-202ENST00000396521 PLK4O00444 970 aa18.13■□□□□ 0.49
EXOSC3-202ENST00000396521 PMM2O15305 246 aa18.13■□□□□ 0.49
EXOSC3-202ENST00000396521 MID1O15344 667 aa18.13■□□□□ 0.49
EXOSC3-202ENST00000396521 PRR29P0C7W0 189 aa18.13■□□□□ 0.49
EXOSC3-202ENST00000396521 SLC6A4P31645 630 aa18.13■□□□□ 0.49
EXOSC3-202ENST00000396521 EIF2S3P41091 472 aaKnown RBP18.13■□□□□ 0.49
EXOSC3-202ENST00000396521 OXCT1P55809 520 aa18.13■□□□□ 0.49
EXOSC3-202ENST00000396521 IL9RQ01113 521 aa18.13■□□□□ 0.49
EXOSC3-202ENST00000396521 SULT2A1Q06520 285 aa18.13■□□□□ 0.49
EXOSC3-202ENST00000396521 CETN1Q12798 172 aa18.13■□□□□ 0.49
EXOSC3-202ENST00000396521 ELAVL3Q14576 367 aaKnown RBP18.13■□□□□ 0.49
EXOSC3-202ENST00000396521 DCAF17Q5H9S7 520 aaPredicted RBP18.13■□□□□ 0.49
EXOSC3-202ENST00000396521 MS4A13Q5J8X5 152 aa18.13■□□□□ 0.49
EXOSC3-202ENST00000396521 MARCH9Q86YJ5 346 aa18.13■□□□□ 0.49
EXOSC3-202ENST00000396521 MMAAQ8IVH4 418 aaKnown RBP18.13■□□□□ 0.49
EXOSC3-202ENST00000396521 DHX40Q8IX18 779 aaKnown RBP18.13■□□□□ 0.49
EXOSC3-202ENST00000396521 MFSD2AQ8NA29 543 aa18.13■□□□□ 0.49
EXOSC3-202ENST00000396521 TSC1Q92574 1164 aa18.13■□□□□ 0.49
EXOSC3-202ENST00000396521 MRGPRX3Q96LB0 322 aa18.13■□□□□ 0.49
EXOSC3-202ENST00000396521 METTL14Q9HCE5 456 aaKnown RBP18.13■□□□□ 0.49
EXOSC3-202ENST00000396521 ERVW-1Q9UQF0 538 aa18.13■□□□□ 0.49
EXOSC3-202ENST00000396521 COL5A1P20908 1838 aaPredicted RBP18.12■□□□□ 0.49
EXOSC3-202ENST00000396521 GOLGA6L7A0A1B0GV03 622 aa18.12■□□□□ 0.49
EXOSC3-202ENST00000396521 A0A1W2PR77 199 aa18.12■□□□□ 0.49
EXOSC3-202ENST00000396521 SLC7A4O43246 635 aa18.12■□□□□ 0.49
EXOSC3-202ENST00000396521 LATO43561 262 aa18.12■□□□□ 0.49
EXOSC3-202ENST00000396521 ZNF202O95125 648 aa18.12■□□□□ 0.49
EXOSC3-202ENST00000396521 EPHA8P29322 1005 aaPredicted RBP18.12■□□□□ 0.49
EXOSC3-202ENST00000396521 ACADVLP49748 655 aa18.12■□□□□ 0.49
EXOSC3-202ENST00000396521 LRRC63Q05C16 580 aa18.12■□□□□ 0.49
EXOSC3-202ENST00000396521 PITRM1Q5JRX3 1037 aa18.12■□□□□ 0.49
EXOSC3-202ENST00000396521 PMF1Q6P1K2 205 aa18.12■□□□□ 0.49
EXOSC3-202ENST00000396521 TMEM270Q6UE05 265 aa18.12■□□□□ 0.49
EXOSC3-202ENST00000396521 DSG4Q86SJ6 1040 aa18.12■□□□□ 0.49
EXOSC3-202ENST00000396521 GATAD2AQ86YP4 633 aa18.12■□□□□ 0.49
EXOSC3-202ENST00000396521 CARNMT1Q8N4J0 409 aa18.12■□□□□ 0.49
EXOSC3-202ENST00000396521 UBR7Q8N806 425 aa18.12■□□□□ 0.49
EXOSC3-202ENST00000396521 SERAC1Q96JX3 654 aa18.12■□□□□ 0.49
EXOSC3-202ENST00000396521 DCBLD2Q96PD2 775 aa18.12■□□□□ 0.49
EXOSC3-202ENST00000396521 INTS6Q9UL03 887 aaKnown RBP18.12■□□□□ 0.49
EXOSC3-202ENST00000396521 DMTF1Q9Y222 760 aa18.12■□□□□ 0.49
EXOSC3-202ENST00000396521 CEP83Q9Y592 693 aa18.12■□□□□ 0.49
EXOSC3-202ENST00000396521 AK5Q9Y6K8 562 aa18.12■□□□□ 0.49
EXOSC3-202ENST00000396521 CAPN8A6NHC0 703 aa18.11■□□□□ 0.49
EXOSC3-202ENST00000396521 LUC7L3O95232 432 aaKnown RBP18.11■□□□□ 0.49
EXOSC3-202ENST00000396521 ACADSBP45954 432 aa18.11■□□□□ 0.49
EXOSC3-202ENST00000396521 VASPP50552 380 aaPredicted RBP18.11■□□□□ 0.49
EXOSC3-202ENST00000396521 NXPH1P58417 271 aa18.11■□□□□ 0.49
EXOSC3-202ENST00000396521 RPS24P62847 133 aaKnown RBP18.11■□□□□ 0.49
EXOSC3-202ENST00000396521 NUCB2P80303 420 aa18.11■□□□□ 0.49
EXOSC3-202ENST00000396521 PKP1Q13835 747 aa18.11■□□□□ 0.49
EXOSC3-202ENST00000396521 KCNJ12Q14500 433 aa18.11■□□□□ 0.49
EXOSC3-202ENST00000396521 NADSYN1Q6IA69 706 aa18.11■□□□□ 0.49
EXOSC3-202ENST00000396521 NAPEPLDQ6IQ20 393 aa18.11■□□□□ 0.49
EXOSC3-202ENST00000396521 FBXL19Q6PCT2 694 aa18.11■□□□□ 0.49
EXOSC3-202ENST00000396521 PRPF39Q86UA1 669 aaKnown RBP18.11■□□□□ 0.49
EXOSC3-202ENST00000396521 EID2Q8N6I1 236 aa18.11■□□□□ 0.49
EXOSC3-202ENST00000396521 OR14C36Q8NHC7 312 aa18.11■□□□□ 0.49
EXOSC3-202ENST00000396521 SNIP1Q8TAD8 396 aaKnown RBP18.11■□□□□ 0.49
EXOSC3-202ENST00000396521 SLC39A13Q96H72 371 aa18.11■□□□□ 0.49
EXOSC3-202ENST00000396521 FCRL2Q96LA5 508 aaPredicted RBP18.11■□□□□ 0.49
EXOSC3-202ENST00000396521 PRICKLE1Q96MT3 831 aaPredicted RBP18.11■□□□□ 0.49
EXOSC3-202ENST00000396521 NT5C1BQ96P26 610 aa18.11■□□□□ 0.49
EXOSC3-202ENST00000396521 FAM129BQ96TA1 746 aa18.11■□□□□ 0.49
EXOSC3-202ENST00000396521 EBF2Q9HAK2 575 aa18.11■□□□□ 0.49
EXOSC3-202ENST00000396521 SERGEFQ9UGK8 458 aa18.11■□□□□ 0.49
EXOSC3-202ENST00000396521 M0QYV0 167 aa18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 ATXN7O15265 892 aaPredicted RBP18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 APOEP02649 317 aa18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 WNT1P04628 370 aa18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 CKMT2P17540 419 aa18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 RGS7P49802 495 aa18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 ADPRHP54922 357 aa18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 E2F1Q01094 437 aa18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 TARDBPQ13148 414 aaKnown RBP eCLIP18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 MTA1Q13330 715 aa18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 SHBQ15464 509 aa18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 DCAF6Q58WW2 860 aa18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 HES3Q5TGS1 186 aa18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 TTC39BQ5VTQ0 682 aaPredicted RBP18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 SFMBT2Q5VUG0 894 aa18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 FAM46CQ5VWP2 391 aa18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 DQX1Q8TE96 717 aaKnown RBP18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 RFFLQ8WZ73 363 aa18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 TFAP2BQ92481 460 aa18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 SLC35C1Q96A29 364 aa18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 BTN2A3PQ96KV6 586 aa18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 GSDMAQ96QA5 445 aa18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 SPAG5Q96R06 1193 aa18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 MTG2Q9H4K7 406 aa18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 PRORYQ9H606 182 aa18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 TJP2Q9UDY2 1190 aa18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 SLC12A6Q9UHW9 1150 aa18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 PCDHB4Q9Y5E5 795 aa18.1■□□□□ 0.49
EXOSC3-202ENST00000396521 MUC22E2RYF6 1773 aaPredicted RBP18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 TBC1D3DA0A087WVF3 549 aa18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 TBC1D3IA0A087WXS9 549 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms