RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 PIP4P1Q86T03 277 aa18.9■□□□□ 0.62
FXN-203ENST00000396366 NOP9Q86U38 636 aaKnown RBP18.9■□□□□ 0.62
FXN-203ENST00000396366 C1orf216Q8TAB5 229 aa18.9■□□□□ 0.62
FXN-203ENST00000396366 ENOX1Q8TC92 643 aaKnown RBP18.9■□□□□ 0.62
FXN-203ENST00000396366 PDCL3Q9H2J4 239 aa18.9■□□□□ 0.62
FXN-203ENST00000396366 ANLNQ9NQW6 1124 aa18.9■□□□□ 0.62
FXN-203ENST00000396366 SUSD2Q9UGT4 822 aa18.9■□□□□ 0.62
FXN-203ENST00000396366 HS3ST4Q9Y661 456 aa18.9■□□□□ 0.62
FXN-203ENST00000396366 MAP1BP46821 2468 aaKnown RBP18.9■□□□□ 0.62
FXN-203ENST00000396366 PCNX2A6NKB5 2137 aa18.89■□□□□ 0.62
FXN-203ENST00000396366 A0A1B0GTW7 788 aa18.89■□□□□ 0.61
FXN-203ENST00000396366 SPAARA0A1B0GVQ0 90 aa18.89■□□□□ 0.61
FXN-203ENST00000396366 I6L893 689 aaPredicted RBP18.89■□□□□ 0.61
FXN-203ENST00000396366 ASLP04424 464 aa18.89■□□□□ 0.61
FXN-203ENST00000396366 SYPP08247 313 aa18.89■□□□□ 0.61
FXN-203ENST00000396366 SLC2A3P11169 496 aa18.89■□□□□ 0.61
FXN-203ENST00000396366 CD59P13987 128 aa18.89■□□□□ 0.61
FXN-203ENST00000396366 SPINK2P20155 84 aa18.89■□□□□ 0.61
FXN-203ENST00000396366 NOS2P35228 1153 aa18.89■□□□□ 0.61
FXN-203ENST00000396366 FAM193AP78312 1265 aa18.89■□□□□ 0.61
FXN-203ENST00000396366 ECT2LQ008S8 904 aa18.89■□□□□ 0.61
FXN-203ENST00000396366 BNC1Q01954 994 aa18.89■□□□□ 0.61
FXN-203ENST00000396366 FOXC1Q12948 553 aa18.89■□□□□ 0.61
FXN-203ENST00000396366 GRIK2Q13002 908 aa18.89■□□□□ 0.61
FXN-203ENST00000396366 CT47A1Q5JQC4 288 aaPredicted RBP18.89■□□□□ 0.61
FXN-203ENST00000396366 CDKAL1Q5VV42 579 aa18.89■□□□□ 0.61
FXN-203ENST00000396366 ZNF776Q68DI1 518 aaPredicted RBP18.89■□□□□ 0.61
FXN-203ENST00000396366 HDDC3Q8N4P3 179 aa18.89■□□□□ 0.61
FXN-203ENST00000396366 TMEM35BQ8NCS4 154 aa18.89■□□□□ 0.61
FXN-203ENST00000396366 ZNF397Q8NF99 534 aaPredicted RBP18.89■□□□□ 0.61
FXN-203ENST00000396366 OR52K2Q8NGK3 314 aa18.89■□□□□ 0.61
FXN-203ENST00000396366 SNX19Q92543 992 aa18.89■□□□□ 0.61
FXN-203ENST00000396366 STK33Q9BYT3 514 aa18.89■□□□□ 0.61
FXN-203ENST00000396366 IL21RQ9HBE5 538 aa18.89■□□□□ 0.61
FXN-203ENST00000396366 PIGVQ9NUD9 493 aa18.89■□□□□ 0.61
FXN-203ENST00000396366 SERGEFQ9UGK8 458 aa18.89■□□□□ 0.61
FXN-203ENST00000396366 VANGL2Q9ULK5 521 aa18.89■□□□□ 0.61
FXN-203ENST00000396366 CEP83Q9Y592 693 aa18.89■□□□□ 0.61
FXN-203ENST00000396366 SNX10Q9Y5X0 201 aa18.89■□□□□ 0.61
FXN-203ENST00000396366 BCAT2O15382 392 aaPredicted RBP18.88■□□□□ 0.61
FXN-203ENST00000396366 PAGE1O75459 146 aa18.88■□□□□ 0.61
FXN-203ENST00000396366 MOCS3O95396 460 aa18.88■□□□□ 0.61
FXN-203ENST00000396366 ADCY5O95622 1261 aa18.88■□□□□ 0.61
FXN-203ENST00000396366 SEMA4FO95754 770 aa18.88■□□□□ 0.61
FXN-203ENST00000396366 SRPRAP08240 638 aaKnown RBP18.88■□□□□ 0.61
FXN-203ENST00000396366 MMEP08473 750 aa18.88■□□□□ 0.61
FXN-203ENST00000396366 VAV1P15498 845 aa18.88■□□□□ 0.61
FXN-203ENST00000396366 CDH5P33151 784 aaPredicted RBP18.88■□□□□ 0.61
FXN-203ENST00000396366 MATKP42679 507 aa18.88■□□□□ 0.61
FXN-203ENST00000396366 KRT31Q15323 416 aa18.88■□□□□ 0.61
FXN-203ENST00000396366 SMYD5Q6GMV2 418 aa18.88■□□□□ 0.61
FXN-203ENST00000396366 CXorf57Q6NSI4 855 aaKnown RBP18.88■□□□□ 0.61
FXN-203ENST00000396366 RBM43Q6ZSC3 357 aaKnown RBP18.88■□□□□ 0.61
FXN-203ENST00000396366 BIRC7Q96CA5 298 aa18.88■□□□□ 0.61
FXN-203ENST00000396366 CAMK1GQ96NX5 476 aa18.88■□□□□ 0.61
FXN-203ENST00000396366 RPRD1AQ96P16 312 aaPredicted RBP18.88■□□□□ 0.61
FXN-203ENST00000396366 FAM129BQ96TA1 746 aa18.88■□□□□ 0.61
FXN-203ENST00000396366 NPY6RQ99463 290 aa18.88■□□□□ 0.61
FXN-203ENST00000396366 BTBD1Q9H0C5 482 aa18.88■□□□□ 0.61
FXN-203ENST00000396366 SIK2Q9H0K1 926 aa18.88■□□□□ 0.61
FXN-203ENST00000396366 GANQ9H2C0 597 aa18.88■□□□□ 0.61
FXN-203ENST00000396366 PABPC3Q9H361 631 aaKnown RBP18.88■□□□□ 0.61
FXN-203ENST00000396366 FBRSQ9HAH7 460 aa18.88■□□□□ 0.61
FXN-203ENST00000396366 TMPRSS4Q9NRS4 437 aa18.88■□□□□ 0.61
FXN-203ENST00000396366 DNAAF2Q9NVR5 837 aaKnown RBP18.88■□□□□ 0.61
FXN-203ENST00000396366 FANCLQ9NW38 375 aa18.88■□□□□ 0.61
FXN-203ENST00000396366 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.88■□□□□ 0.61
FXN-203ENST00000396366 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.88■□□□□ 0.61
FXN-203ENST00000396366 KMT2BQ9UMN6 2715 aaPredicted RBP18.87■□□□□ 0.61
FXN-203ENST00000396366 AKAP13Q12802 2813 aa18.87■□□□□ 0.61
FXN-203ENST00000396366 F8VZ95 297 aa18.87■□□□□ 0.61
FXN-203ENST00000396366 EPHB6O15197 1021 aa18.87■□□□□ 0.61
FXN-203ENST00000396366 MID1O15344 667 aa18.87■□□□□ 0.61
FXN-203ENST00000396366 GJB3O75712 270 aa18.87■□□□□ 0.61
FXN-203ENST00000396366 GABRB2P47870 512 aa18.87■□□□□ 0.61
FXN-203ENST00000396366 CSNK1EP49674 416 aaKnown RBP18.87■□□□□ 0.61
FXN-203ENST00000396366 SNX16P57768 344 aa18.87■□□□□ 0.61
FXN-203ENST00000396366 SHC2P98077 582 aa18.87■□□□□ 0.61
FXN-203ENST00000396366 ZBTB16Q05516 673 aa18.87■□□□□ 0.61
FXN-203ENST00000396366 RABGAP1LQ5R372 815 aa18.87■□□□□ 0.61
FXN-203ENST00000396366 ERICH1Q86X53 443 aa18.87■□□□□ 0.61
FXN-203ENST00000396366 XYLT1Q86Y38 959 aa18.87■□□□□ 0.61
FXN-203ENST00000396366 MMAAQ8IVH4 418 aaKnown RBP18.87■□□□□ 0.61
FXN-203ENST00000396366 KDM1BQ8NB78 822 aa18.87■□□□□ 0.61
FXN-203ENST00000396366 GANCQ8TET4 914 aa18.87■□□□□ 0.61
FXN-203ENST00000396366 SLC20A1Q8WUM9 679 aa18.87■□□□□ 0.61
FXN-203ENST00000396366 CPA5Q8WXQ8 436 aa18.87■□□□□ 0.61
FXN-203ENST00000396366 PTPRN2Q92932 1015 aa18.87■□□□□ 0.61
FXN-203ENST00000396366 C18orf8Q96DM3 657 aa18.87■□□□□ 0.61
FXN-203ENST00000396366 TBCBQ99426 244 aa18.87■□□□□ 0.61
FXN-203ENST00000396366 SLC32A1Q9H598 525 aa18.87■□□□□ 0.61
FXN-203ENST00000396366 WASF3Q9UPY6 502 aa18.87■□□□□ 0.61
FXN-203ENST00000396366 ITIH6Q6UXX5 1313 aa18.86■□□□□ 0.61
FXN-203ENST00000396366 A0A1B0GVM2 712 aa18.86■□□□□ 0.61
FXN-203ENST00000396366 A0A1B0GVT2 93 aa18.86■□□□□ 0.61
FXN-203ENST00000396366 TCAF2A6NFQ2 919 aa18.86■□□□□ 0.61
FXN-203ENST00000396366 UPK3BL1B0FP48 263 aa18.86■□□□□ 0.61
FXN-203ENST00000396366 UPK3BL2E5RIL1 263 aa18.86■□□□□ 0.61
FXN-203ENST00000396366 GOLGA8SH3BPF8 625 aa18.86■□□□□ 0.61
FXN-203ENST00000396366 CNTN5O94779 1100 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms