RNA–Protein interactions for RNA: ENST00000396222.6

LDHA-204, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 1,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-204ENST00000396222 PCDH12Q9NPG4 1184 aa7.8□□□□□ -1.16
LDHA-204ENST00000396222 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.8□□□□□ -1.16
LDHA-204ENST00000396222 GOLGA6AQ9NYA3 693 aa7.8□□□□□ -1.16
LDHA-204ENST00000396222 MARCH2Q9P0N8 246 aa7.8□□□□□ -1.16
LDHA-204ENST00000396222 GMIPQ9P107 970 aa7.8□□□□□ -1.16
LDHA-204ENST00000396222 HCSTQ9UBK5 93 aa7.8□□□□□ -1.16
LDHA-204ENST00000396222 DNMT3LQ9UJW3 386 aa7.8□□□□□ -1.16
LDHA-204ENST00000396222 MAGED2Q9UNF1 606 aaPredicted RBP7.8□□□□□ -1.16
LDHA-204ENST00000396222 GPSM3Q9Y4H4 160 aa7.8□□□□□ -1.16
LDHA-204ENST00000396222 NLRC5Q86WI3 1866 aa7.8□□□□□ -1.16
LDHA-204ENST00000396222 C5orf60A6NFR6 353 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 KCNU1A8MYU2 1149 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 E7EVH7 732 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 MYO1CO00159 1063 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 CHADO15335 359 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 OPHN1O60890 802 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 GCATO75600 419 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 FGF19O95750 216 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 C1RP00736 705 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 ERCC2P18074 760 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 AMPD1P23109 780 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 IVDP26440 423 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 PHBP35232 272 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 FDFT1P37268 417 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 HARS2P49590 506 aaKnown RBP7.79□□□□□ -1.16
LDHA-204ENST00000396222 RABGGTBP53611 331 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 PITX1P78337 314 aaPredicted RBP7.79□□□□□ -1.16
LDHA-204ENST00000396222 BASP1P80723 227 aaKnown RBP7.79□□□□□ -1.16
LDHA-204ENST00000396222 CDK16Q00536 496 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 SEMA3BQ13214 749 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 EIF4EBP2Q13542 120 aaPredicted RBP7.79□□□□□ -1.16
LDHA-204ENST00000396222 DPYSQ14117 519 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 RAB6CQ53S08 254 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 TMEM240Q5SV17 173 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 HECTD3Q5T447 861 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 TIGD7Q6NT04 549 aaPredicted RBP7.79□□□□□ -1.16
LDHA-204ENST00000396222 RWDD4Q6NW29 188 aaKnown RBP7.79□□□□□ -1.16
LDHA-204ENST00000396222 ARHGEF18Q6ZSZ5 1173 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 CCDC25Q86WR0 208 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 HERC6Q8IVU3 1022 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 C7orf61Q8IZ16 206 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 PYROXD2Q8N2H3 581 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 HTR3CQ8WXA8 447 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 CASP10Q92851 521 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 COL26A1Q96A83 441 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 MYRFLQ96LU7 910 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 SAMD11Q96NU1 681 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 QKIQ96PU8 341 aaKnown RBP eCLIP7.79□□□□□ -1.16
LDHA-204ENST00000396222 DDX50Q9BQ39 737 aaKnown RBP7.79□□□□□ -1.16
LDHA-204ENST00000396222 RAB6CQ9H0N0 254 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 PPCSQ9HAB8 311 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 RXFP1Q9HBX9 757 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 DTLQ9NZJ0 730 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 SAE1Q9UBE0 346 aaPredicted RBP7.79□□□□□ -1.16
LDHA-204ENST00000396222 A6NNZ2 444 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 AP3B1O00203 1094 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 DCLK1O15075 740 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 TP73O15350 636 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 TLR5O60602 858 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 NEBLO76041 1014 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 LRIG2O94898 1065 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 LRG1P02750 347 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 RB1P06400 928 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 NUDT17P0C025 328 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 ZDHHC11BP0C7U3 371 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 SRGAP2BP0DMP2 458 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 RBL1P28749 1068 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 LMAN1P49257 510 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 SLC11A2P49281 568 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 GPR15P49685 360 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 MLLT6P55198 1093 aaPredicted RBP7.79□□□□□ -1.16
LDHA-204ENST00000396222 AP1B1Q10567 949 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 EFEMP1Q12805 493 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 HIF1AQ16665 826 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 ANO4Q32M45 955 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 PLEKHG6Q3KR16 790 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 TUBB8Q3ZCM7 444 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 SDHAF4Q5VUM1 108 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 ITPRIPL1Q6GPH6 555 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 PDE12Q6L8Q7 609 aaKnown RBP7.79□□□□□ -1.16
LDHA-204ENST00000396222 RHBDF2Q6PJF5 856 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 NPNTQ6UXI9 565 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 RSPO2Q6UXX9 243 aaPredicted RBP7.79□□□□□ -1.16
LDHA-204ENST00000396222 FAM76AQ8TAV0 307 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 PLD4Q96BZ4 506 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 HDAC11Q96DB2 347 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 FCRL2Q96LA5 508 aaPredicted RBP7.79□□□□□ -1.16
LDHA-204ENST00000396222 OLFM3Q96PB7 478 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 GCNAQ96QF7 691 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 RBM15Q96T37 977 aaKnown RBP eCLIP7.79□□□□□ -1.164e-13■■■□□ 17.4
LDHA-204ENST00000396222 ROPN1BQ9BZX4 212 aaPredicted RBP7.79□□□□□ -1.16
LDHA-204ENST00000396222 SIK2Q9H0K1 926 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 ZBP1Q9H171 429 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 EPB41L4BQ9H329 900 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 ROPN1Q9HAT0 212 aaPredicted RBP7.79□□□□□ -1.16
LDHA-204ENST00000396222 TMBIM4Q9HC24 238 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 PPARGC1AQ9UBK2 798 aaKnown RBP7.79□□□□□ -1.16
LDHA-204ENST00000396222 SFMBT1Q9UHJ3 866 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 TRHDEQ9UKU6 1024 aa7.79□□□□□ -1.16
LDHA-204ENST00000396222 YIPF1Q9Y548 306 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms