RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 ARHGEF37A1IGU5 675 aa17.21■□□□□ 0.35
NUP50-202ENST00000396096 I3L4J1 428 aa17.21■□□□□ 0.35
NUP50-202ENST00000396096 POMCP01189 267 aa17.21■□□□□ 0.35
NUP50-202ENST00000396096 BPGMP07738 259 aa17.21■□□□□ 0.35
NUP50-202ENST00000396096 TYMPP19971 482 aa17.21■□□□□ 0.35
NUP50-202ENST00000396096 BDNFP23560 247 aa17.21■□□□□ 0.35
NUP50-202ENST00000396096 FLT3LGP49771 235 aa17.21■□□□□ 0.35
NUP50-202ENST00000396096 OCRLQ01968 901 aa17.21■□□□□ 0.35
NUP50-202ENST00000396096 KCNA10Q16322 511 aa17.21■□□□□ 0.35
NUP50-202ENST00000396096 TEX44Q53QW1 395 aa17.21■□□□□ 0.35
NUP50-202ENST00000396096 FAM91A1Q658Y4 838 aa17.21■□□□□ 0.35
NUP50-202ENST00000396096 ITPRIPL1Q6GPH6 555 aa17.21■□□□□ 0.35
NUP50-202ENST00000396096 KLHDC8BQ8IXV7 354 aa17.21■□□□□ 0.35
NUP50-202ENST00000396096 DQX1Q8TE96 717 aaKnown RBP17.21■□□□□ 0.35
NUP50-202ENST00000396096 UTP4Q969X6 686 aaKnown RBP17.21■□□□□ 0.35
NUP50-202ENST00000396096 SUSD3Q96L08 255 aa17.21■□□□□ 0.35
NUP50-202ENST00000396096 TUBB6Q9BUF5 446 aa17.21■□□□□ 0.35
NUP50-202ENST00000396096 TMEM120AQ9BXJ8 343 aa17.21■□□□□ 0.35
NUP50-202ENST00000396096 ARHGAP39Q9C0H5 1083 aa17.21■□□□□ 0.35
NUP50-202ENST00000396096 LRRC40Q9H9A6 602 aa17.21■□□□□ 0.35
NUP50-202ENST00000396096 HAO1Q9UJM8 370 aa17.21■□□□□ 0.35
NUP50-202ENST00000396096 SQORQ9Y6N5 450 aa17.21■□□□□ 0.35
NUP50-202ENST00000396096 NUMBLQ9Y6R0 609 aa17.21■□□□□ 0.35
NUP50-202ENST00000396096 A0A0G2JND7 137 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 SNNO75324 88 aaPredicted RBP17.2■□□□□ 0.34
NUP50-202ENST00000396096 WFS1O76024 890 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 LRIG2O94898 1065 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 ALDOAP04075 364 aaKnown RBP17.2■□□□□ 0.34
NUP50-202ENST00000396096 CD68P34810 354 aaPredicted RBP17.2■□□□□ 0.34
NUP50-202ENST00000396096 CACNB2Q08289 660 aaPredicted RBP17.2■□□□□ 0.34
NUP50-202ENST00000396096 BST1Q10588 318 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 TRIM71Q2Q1W2 868 aaKnown RBP17.2■□□□□ 0.34
NUP50-202ENST00000396096 WLSQ5T9L3 541 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 ZNF598Q86UK7 904 aaKnown RBP17.2■□□□□ 0.34
NUP50-202ENST00000396096 NUDCD3Q8IVD9 361 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 OR10T2Q8NGX3 314 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 ADAM2Q99965 735 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 TLE6Q9H808 572 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 ARHGEF38Q9NXL2 777 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 HEY2Q9UBP5 337 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 FRMPD3Q5JV73 1810 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.2■□□□□ 0.34
NUP50-202ENST00000396096 ZBTB24O43167 697 aaPredicted RBP17.2■□□□□ 0.34
NUP50-202ENST00000396096 GLRA3O75311 464 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 HTR7P34969 479 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 TRIM32Q13049 653 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 OVOS1Q6IE37 1185 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 TMEM135Q86UB9 458 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 LRRTM3Q86VH5 581 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 THEM5Q8N1Q8 247 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 OR52K1Q8NGK4 314 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 ZSCAN18Q8TBC5 510 aaPredicted RBP17.2■□□□□ 0.34
NUP50-202ENST00000396096 ISL2Q96A47 359 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 CERS2Q96G23 380 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 TSGA13Q96PP4 275 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 MECRQ9BV79 373 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 KCNK4Q9NYG8 393 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 ADAM28Q9UKQ2 775 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 NEU3Q9UQ49 428 aa17.2■□□□□ 0.34
NUP50-202ENST00000396096 ITGA2BP08514 1039 aa17.19■□□□□ 0.34
NUP50-202ENST00000396096 EPHB2P29323 1055 aa17.19■□□□□ 0.34
NUP50-202ENST00000396096 GP5P40197 560 aa17.19■□□□□ 0.34
NUP50-202ENST00000396096 COG7P83436 770 aa17.19■□□□□ 0.34
NUP50-202ENST00000396096 TMPRSS15P98073 1019 aa17.19■□□□□ 0.34
NUP50-202ENST00000396096 ZBTB17Q13105 803 aa17.19■□□□□ 0.34
NUP50-202ENST00000396096 CHI3L2Q15782 390 aa17.19■□□□□ 0.34
NUP50-202ENST00000396096 INSCQ1MX18 579 aa17.19■□□□□ 0.34
NUP50-202ENST00000396096 PREPLQ4J6C6 727 aaPredicted RBP17.19■□□□□ 0.34
NUP50-202ENST00000396096 BRMS1LQ5PSV4 323 aa17.19■□□□□ 0.34
NUP50-202ENST00000396096 GRTP1Q5TC63 336 aa17.19■□□□□ 0.34
NUP50-202ENST00000396096 CCDC91Q7Z6B0 441 aa17.19■□□□□ 0.34
NUP50-202ENST00000396096 RASSF3Q86WH2 238 aa17.19■□□□□ 0.34
NUP50-202ENST00000396096 TEKT5Q96M29 485 aa17.19■□□□□ 0.34
NUP50-202ENST00000396096 CPNE1Q99829 537 aa17.19■□□□□ 0.34
NUP50-202ENST00000396096 MLPHQ9BV36 600 aaPredicted RBP17.19■□□□□ 0.34
NUP50-202ENST00000396096 PIH1D1Q9NWS0 290 aaKnown RBP17.19■□□□□ 0.34
NUP50-202ENST00000396096 BFARQ9NZS9 450 aa17.19■□□□□ 0.34
NUP50-202ENST00000396096 DCDC2Q9UHG0 476 aa17.19■□□□□ 0.34
NUP50-202ENST00000396096 VANGL2Q9ULK5 521 aa17.19■□□□□ 0.34
NUP50-202ENST00000396096 SNX10Q9Y5X0 201 aa17.19■□□□□ 0.34
NUP50-202ENST00000396096 TLL2Q9Y6L7 1015 aa17.19■□□□□ 0.34
NUP50-202ENST00000396096 RPS6KL1Q9Y6S9 549 aa17.19■□□□□ 0.34
NUP50-202ENST00000396096 SHROOM3Q8TF72 1996 aa17.19■□□□□ 0.34
NUP50-202ENST00000396096 MAGEB16A2A368 324 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 TPP1O14773 563 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 IRAK2O43187 625 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 CACNG3O60359 315 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 USP1O94782 785 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 HAUS5O94927 633 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 CBX6O95503 412 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 GSRP00390 522 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 PTPN4P29074 926 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 HOXC13P31276 330 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 MAGEA12P43365 314 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 NPY2RP49146 381 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 TSPY1Q01534 308 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 PDE1CQ14123 709 aaPredicted RBP17.18■□□□□ 0.34
NUP50-202ENST00000396096 KRT72Q14CN4 511 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 PAN2Q504Q3 1202 aaKnown RBP17.18■□□□□ 0.34
NUP50-202ENST00000396096 CES4AQ5XG92 561 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms