RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 FUT10Q6P4F1 479 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 TRMT10BQ6PF06 316 aaKnown RBP12.45□□□□□ -0.42
ITGB1-202ENST00000396033 CCDC121Q6ZUS5 278 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 MON1AQ86VX9 555 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 GPR152Q8TDT2 470 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 ALKBH8Q96BT7 664 aaKnown RBP12.45□□□□□ -0.42
ITGB1-202ENST00000396033 AGAP3Q96P47 875 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 SMYD2Q9NRG4 433 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 GMIPQ9P107 970 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 NEU3Q9UQ49 428 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 TBKBP1A7MCY6 615 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 NT5C1B-RDH14C9J2C7 533 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 DFFAO00273 331 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 HOXA2O43364 376 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 PAX7P23759 505 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 FOXN2P32314 431 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 PBX3P40426 434 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 MAGEA11P43364 429 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 ATN1P54259 1190 aaPredicted RBP12.45□□□□□ -0.42
ITGB1-202ENST00000396033 USP46P62068 366 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 ZBTB17Q13105 803 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 YTHDF3Q7Z739 585 aaKnown RBP12.45□□□□□ -0.42
ITGB1-202ENST00000396033 TBC1D31Q96DN5 1066 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 FCRL2Q96LA5 508 aaPredicted RBP12.45□□□□□ -0.42
ITGB1-202ENST00000396033 TTC3P53804 2025 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 TET1Q8NFU7 2136 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 ZBTB24O43167 697 aaPredicted RBP12.45□□□□□ -0.42
ITGB1-202ENST00000396033 TAC1P20366 129 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 FGFR3P22607 806 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 COG7P83436 770 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 ACTN3Q08043 901 aaPredicted RBP12.45□□□□□ -0.42
ITGB1-202ENST00000396033 MRPL58Q14197 206 aaKnown RBP12.45□□□□□ -0.42
ITGB1-202ENST00000396033 PPP2R5DQ14738 602 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 MTFR1Q15390 333 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 WLSQ5T9L3 541 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 ITPRIPL1Q6GPH6 555 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 LVRNQ6Q4G3 990 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 ARHGAP18Q8N392 663 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 MIEF2Q96C03 454 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 SERAC1Q96JX3 654 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 MRPL9Q9BYD2 267 aaKnown RBP12.45□□□□□ -0.42
ITGB1-202ENST00000396033 SAGE1Q9NXZ1 904 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 SOAT2O75908 522 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 KRT37O76014 449 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 CSH1P0DML2 217 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 CSH2P0DML3 217 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 CCL23P55773 120 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 ITIH4Q14624 930 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 BANPQ8N9N5 519 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 GBA3Q9H227 469 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 CATSPERBQ9H7T0 1116 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 PAK6Q9NQU5 681 aaPredicted RBP12.44□□□□□ -0.42
ITGB1-202ENST00000396033 ZNF180Q9UJW8 692 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 TRHDEQ9UKU6 1024 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 GRID1Q9ULK0 1009 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.44□□□□□ -0.42
ITGB1-202ENST00000396033 FAM159BA6NKW6 160 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 TRIM49D1C9J1S8 452 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 FGF10O15520 208 aaPredicted RBP12.44□□□□□ -0.42
ITGB1-202ENST00000396033 SNX3O60493 162 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 UGT1A9O60656 530 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 ATPAF2Q8N5M1 289 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 TCP10LQ8TDR4 215 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 SEPT5Q99719 369 aaPredicted RBP12.44□□□□□ -0.42
ITGB1-202ENST00000396033 GORASP1Q9BQQ3 440 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 HIPK3Q9H422 1215 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 UGT1A7Q9HAW7 530 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 UGT1A10Q9HAW8 530 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 UGT1A8Q9HAW9 530 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 SYBUQ9NX95 663 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 MRPL42Q9Y6G3 142 aaKnown RBP12.44□□□□□ -0.42
ITGB1-202ENST00000396033 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.44□□□□□ -0.42
ITGB1-202ENST00000396033 LPXNO60711 386 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 SNRPAP09012 282 aaKnown RBP12.44□□□□□ -0.42
ITGB1-202ENST00000396033 PGAM1P18669 254 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 HTR7P34969 479 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 OLIG2Q13516 323 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 MGAT5BQ3V5L5 792 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 TEX44Q53QW1 395 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 LGSNQ5TDP6 509 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 STEAP4Q687X5 459 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 FAM47EQ6ZV65 393 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 FBXO32Q969P5 355 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 VAT1Q99536 393 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 PPP1R12CQ9BZL4 782 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 SLC27A5Q9Y2P5 690 aa12.44□□□□□ -0.42
ITGB1-202ENST00000396033 PLXNA3P51805 1871 aa12.43□□□□□ -0.42
ITGB1-202ENST00000396033 SHROOM3Q8TF72 1996 aa12.43□□□□□ -0.42
ITGB1-202ENST00000396033 MTMR11A4FU01 709 aa12.43□□□□□ -0.42
ITGB1-202ENST00000396033 TM9SF1O15321 606 aa12.43□□□□□ -0.42
ITGB1-202ENST00000396033 AP2A1O95782 977 aa12.43□□□□□ -0.42
ITGB1-202ENST00000396033 JCHAINP01591 159 aa12.43□□□□□ -0.42
ITGB1-202ENST00000396033 PYGBP11216 843 aa12.43□□□□□ -0.42
ITGB1-202ENST00000396033 NFKB1P19838 968 aa12.43□□□□□ -0.42
ITGB1-202ENST00000396033 HOXC13P31276 330 aa12.43□□□□□ -0.42
ITGB1-202ENST00000396033 CD68P34810 354 aaPredicted RBP12.43□□□□□ -0.42
ITGB1-202ENST00000396033 ELAVL2Q12926 359 aaKnown RBP12.43□□□□□ -0.42
ITGB1-202ENST00000396033 PDK4Q16654 411 aa12.43□□□□□ -0.42
ITGB1-202ENST00000396033 RTP2Q5QGT7 225 aa12.43□□□□□ -0.42
ITGB1-202ENST00000396033 MANEALQ5VSG8 457 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms