RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 PXNP49023 591 aaPredicted RBP17.05■□□□□ 0.32
CXCL1-201ENST00000395761 CDH4P55283 916 aa17.05■□□□□ 0.32
CXCL1-201ENST00000395761 CCZ1BP86790 482 aa17.05■□□□□ 0.32
CXCL1-201ENST00000395761 CCZ1P86791 482 aaPredicted RBP17.05■□□□□ 0.32
CXCL1-201ENST00000395761 SCAPQ12770 1279 aa17.05■□□□□ 0.32
CXCL1-201ENST00000395761 ACBD5Q5T8D3 534 aaPredicted RBP17.05■□□□□ 0.32
CXCL1-201ENST00000395761 CXorf57Q6NSI4 855 aaKnown RBP17.05■□□□□ 0.32
CXCL1-201ENST00000395761 TMEM92Q6UXU6 159 aa17.05■□□□□ 0.32
CXCL1-201ENST00000395761 CHPFQ8IZ52 775 aa17.05■□□□□ 0.32
CXCL1-201ENST00000395761 APCDD1Q8J025 514 aa17.05■□□□□ 0.32
CXCL1-201ENST00000395761 AHI1Q8N157 1196 aa17.05■□□□□ 0.32
CXCL1-201ENST00000395761 WFIKKN2Q8TEU8 576 aa17.05■□□□□ 0.32
CXCL1-201ENST00000395761 CYB5D2Q8WUJ1 264 aa17.05■□□□□ 0.32
CXCL1-201ENST00000395761 CTNNBL1Q8WYA6 563 aaPredicted RBP17.05■□□□□ 0.32
CXCL1-201ENST00000395761 ERLEC1Q96DZ1 483 aa17.05■□□□□ 0.32
CXCL1-201ENST00000395761 PEBP4Q96S96 227 aa17.05■□□□□ 0.32
CXCL1-201ENST00000395761 FAM86C1Q9NVL1 165 aa17.05■□□□□ 0.32
CXCL1-201ENST00000395761 GPATCH2LQ9NWQ4 482 aa17.05■□□□□ 0.32
CXCL1-201ENST00000395761 CACNA2D2Q9NY47 1150 aa17.05■□□□□ 0.32
CXCL1-201ENST00000395761 KIAA1522Q9P206 1035 aaPredicted RBP17.05■□□□□ 0.32
CXCL1-201ENST00000395761 CTTNBP2NLQ9P2B4 639 aa17.05■□□□□ 0.32
CXCL1-201ENST00000395761 THAP10Q9P2Z0 257 aaPredicted RBP17.05■□□□□ 0.32
CXCL1-201ENST00000395761 ANAPC7Q9UJX3 599 aa17.05■□□□□ 0.32
CXCL1-201ENST00000395761 EPN1Q9Y6I3 576 aaPredicted RBP17.05■□□□□ 0.32
CXCL1-201ENST00000395761 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.04■□□□□ 0.32
CXCL1-201ENST00000395761 SOWAHDA6NJG2 315 aa17.04■□□□□ 0.32
CXCL1-201ENST00000395761 EIF3CLB5ME19 914 aaKnown RBP17.04■□□□□ 0.32
CXCL1-201ENST00000395761 ARHGAP6O43182 974 aa17.04■□□□□ 0.32
CXCL1-201ENST00000395761 CLDN11O75508 207 aa17.04■□□□□ 0.32
CXCL1-201ENST00000395761 RNF8O76064 485 aa17.04■□□□□ 0.32
CXCL1-201ENST00000395761 LRIG2O94898 1065 aa17.04■□□□□ 0.32
CXCL1-201ENST00000395761 TMEM253P0C7T8 217 aa17.04■□□□□ 0.32
CXCL1-201ENST00000395761 TCF4P15884 667 aa17.04■□□□□ 0.32
CXCL1-201ENST00000395761 DESP17661 470 aa17.04■□□□□ 0.32
CXCL1-201ENST00000395761 MZF1P28698 734 aaPredicted RBP17.04■□□□□ 0.32
CXCL1-201ENST00000395761 NTSR1P30989 418 aa17.04■□□□□ 0.32
CXCL1-201ENST00000395761 CYLC1P35663 651 aaPredicted RBP17.04■□□□□ 0.32
CXCL1-201ENST00000395761 CSKP41240 450 aa17.04■□□□□ 0.32
CXCL1-201ENST00000395761 NRG1Q02297 640 aaPredicted RBP17.04■□□□□ 0.32
CXCL1-201ENST00000395761 ZNF177Q13360 481 aaPredicted RBP17.04■□□□□ 0.32
CXCL1-201ENST00000395761 EIF4HQ15056 248 aaKnown RBP17.04■□□□□ 0.32
CXCL1-201ENST00000395761 CRY1Q16526 586 aa17.04■□□□□ 0.32
CXCL1-201ENST00000395761 PTPRNQ16849 979 aa17.04■□□□□ 0.32
CXCL1-201ENST00000395761 ZNF528Q3MIS6 628 aa17.04■□□□□ 0.32
CXCL1-201ENST00000395761 HSF5Q4G112 596 aaPredicted RBP17.04■□□□□ 0.32
CXCL1-201ENST00000395761 PITRM1Q5JRX3 1037 aa17.04■□□□□ 0.32
CXCL1-201ENST00000395761 EOGTQ5NDL2 527 aa17.04■□□□□ 0.32
CXCL1-201ENST00000395761 MANEALQ5VSG8 457 aa17.04■□□□□ 0.32
CXCL1-201ENST00000395761 HEATR6Q6AI08 1181 aaKnown RBP17.04■□□□□ 0.32
CXCL1-201ENST00000395761 CYP4V2Q6ZWL3 525 aaPredicted RBP17.04■□□□□ 0.32
CXCL1-201ENST00000395761 TFAP2DQ7Z6R9 452 aa17.04■□□□□ 0.32
CXCL1-201ENST00000395761 ZNF557Q8N988 423 aaPredicted RBP17.04■□□□□ 0.32
CXCL1-201ENST00000395761 ZNF564Q8TBZ8 553 aaPredicted RBP17.04■□□□□ 0.32
CXCL1-201ENST00000395761 UCMAQ8WVF2 138 aa17.04■□□□□ 0.32
CXCL1-201ENST00000395761 NELL1Q92832 810 aa17.04■□□□□ 0.32
CXCL1-201ENST00000395761 ATOH1Q92858 354 aaPredicted RBP17.04■□□□□ 0.32
CXCL1-201ENST00000395761 EIF3CQ99613 913 aaKnown RBP17.04■□□□□ 0.32
CXCL1-201ENST00000395761 ZNF212Q9UDV6 495 aa17.04■□□□□ 0.32
CXCL1-201ENST00000395761 TBC1D30Q9Y2I9 924 aa17.04■□□□□ 0.32
CXCL1-201ENST00000395761 RAD54BQ9Y620 910 aa17.04■□□□□ 0.32
CXCL1-201ENST00000395761 LRCH4O75427 683 aa17.03■□□□□ 0.32
CXCL1-201ENST00000395761 POLR2EP19388 210 aaKnown RBP17.03■□□□□ 0.32
CXCL1-201ENST00000395761 IL12RB1P42701 662 aa17.03■□□□□ 0.32
CXCL1-201ENST00000395761 FNTBP49356 437 aa17.03■□□□□ 0.32
CXCL1-201ENST00000395761 PIGHQ14442 188 aaPredicted RBP17.03■□□□□ 0.32
CXCL1-201ENST00000395761 ZNF234Q14588 700 aa17.03■□□□□ 0.32
CXCL1-201ENST00000395761 CA9Q16790 459 aa17.03■□□□□ 0.32
CXCL1-201ENST00000395761 PLEKHG6Q3KR16 790 aa17.03■□□□□ 0.32
CXCL1-201ENST00000395761 EFHC2Q5JST6 749 aa17.03■□□□□ 0.32
CXCL1-201ENST00000395761 RWDD4Q6NW29 188 aaKnown RBP17.03■□□□□ 0.32
CXCL1-201ENST00000395761 RAD9BQ6WBX8 426 aa17.03■□□□□ 0.32
CXCL1-201ENST00000395761 TRMT11Q7Z4G4 463 aaKnown RBP17.03■□□□□ 0.32
CXCL1-201ENST00000395761 CPNE8Q86YQ8 564 aa17.03■□□□□ 0.32
CXCL1-201ENST00000395761 TTC17Q96AE7 1141 aa17.03■□□□□ 0.32
CXCL1-201ENST00000395761 ALG14Q96F25 216 aa17.03■□□□□ 0.32
CXCL1-201ENST00000395761 GABRG3Q99928 467 aa17.03■□□□□ 0.32
CXCL1-201ENST00000395761 ZYG11BQ9C0D3 744 aa17.03■□□□□ 0.32
CXCL1-201ENST00000395761 OSGEPQ9NPF4 335 aa17.03■□□□□ 0.32
CXCL1-201ENST00000395761 PPARGC1AQ9UBK2 798 aaKnown RBP17.03■□□□□ 0.32
CXCL1-201ENST00000395761 IP6K2Q9UHH9 426 aa17.03■□□□□ 0.32
CXCL1-201ENST00000395761 NEU3Q9UQ49 428 aa17.03■□□□□ 0.32
CXCL1-201ENST00000395761 STON1Q9Y6Q2 735 aa17.03■□□□□ 0.32
CXCL1-201ENST00000395761 CACNA1HO95180 2353 aa17.02■□□□□ 0.32
CXCL1-201ENST00000395761 A0A1W2PQF6 199 aa17.02■□□□□ 0.32
CXCL1-201ENST00000395761 MYO1FO00160 1098 aa17.02■□□□□ 0.32
CXCL1-201ENST00000395761 PRPSAP2O60256 369 aa17.02■□□□□ 0.32
CXCL1-201ENST00000395761 NDUFA10O95299 355 aa17.02■□□□□ 0.32
CXCL1-201ENST00000395761 DLDP09622 509 aaKnown RBP17.02■□□□□ 0.32
CXCL1-201ENST00000395761 IL1R2P27930 398 aa17.02■□□□□ 0.32
CXCL1-201ENST00000395761 L1CAMP32004 1257 aa17.02■□□□□ 0.32
CXCL1-201ENST00000395761 CTSOP43234 321 aaPredicted RBP17.02■□□□□ 0.32
CXCL1-201ENST00000395761 MAGEA1P43355 309 aa17.02■□□□□ 0.32
CXCL1-201ENST00000395761 PLK1P53350 603 aa17.02■□□□□ 0.32
CXCL1-201ENST00000395761 AIF1P55008 147 aa17.02■□□□□ 0.32
CXCL1-201ENST00000395761 ENPP2Q13822 863 aa17.02■□□□□ 0.32
CXCL1-201ENST00000395761 ACAP1Q15027 740 aa17.02■□□□□ 0.32
CXCL1-201ENST00000395761 HS1BP3Q53T59 392 aa17.02■□□□□ 0.32
CXCL1-201ENST00000395761 ERMARDQ5T6L9 678 aa17.02■□□□□ 0.32
CXCL1-201ENST00000395761 RNF219Q5W0B1 726 aaPredicted RBP17.02■□□□□ 0.32
CXCL1-201ENST00000395761 SDE2Q6IQ49 451 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms