RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 MRPL58Q14197 206 aaKnown RBP20.86■□□□□ 0.93
PRKCD-202ENST00000394729 PAFAH1B3Q15102 231 aaKnown RBP20.86■□□□□ 0.93
PRKCD-202ENST00000394729 ANKS3Q6ZW76 656 aa20.86■□□□□ 0.93
PRKCD-202ENST00000394729 RTP4Q96DX8 246 aa20.86■□□□□ 0.93
PRKCD-202ENST00000394729 PGAP3Q96FM1 320 aaPredicted RBP20.86■□□□□ 0.93
PRKCD-202ENST00000394729 ZNF333Q96JL9 665 aa20.86■□□□□ 0.93
PRKCD-202ENST00000394729 STMN4Q9H169 189 aaPredicted RBP20.86■□□□□ 0.93
PRKCD-202ENST00000394729 FBXO44Q9H4M3 255 aa20.86■□□□□ 0.93
PRKCD-202ENST00000394729 CWH43Q9H720 699 aa20.86■□□□□ 0.93
PRKCD-202ENST00000394729 PLAC1Q9HBJ0 212 aa20.86■□□□□ 0.93
PRKCD-202ENST00000394729 ACTL7AQ9Y615 435 aa20.86■□□□□ 0.93
PRKCD-202ENST00000394729 GMNCA6NCL1 334 aa20.86■□□□□ 0.93
PRKCD-202ENST00000394729 ARHGAP42A6NI28 874 aa20.86■□□□□ 0.93
PRKCD-202ENST00000394729 SCAPQ12770 1279 aa20.86■□□□□ 0.93
PRKCD-202ENST00000394729 PLD1Q13393 1074 aa20.86■□□□□ 0.93
PRKCD-202ENST00000394729 USP41Q3LFD5 358 aa20.86■□□□□ 0.93
PRKCD-202ENST00000394729 SMYD5Q6GMV2 418 aa20.86■□□□□ 0.93
PRKCD-202ENST00000394729 BZW1Q7L1Q6 419 aaKnown RBP20.86■□□□□ 0.93
PRKCD-202ENST00000394729 PNPLA1Q8N8W4 532 aa20.86■□□□□ 0.93
PRKCD-202ENST00000394729 ZNF473Q8WTR7 871 aaKnown RBP20.86■□□□□ 0.93
PRKCD-202ENST00000394729 MAML1Q92585 1016 aa20.86■□□□□ 0.93
PRKCD-202ENST00000394729 RPRD1AQ96P16 312 aaPredicted RBP20.86■□□□□ 0.93
PRKCD-202ENST00000394729 CYP2S1Q96SQ9 504 aa20.86■□□□□ 0.93
PRKCD-202ENST00000394729 PNPLA8Q9NP80 782 aa20.86■□□□□ 0.93
PRKCD-202ENST00000394729 SYBUQ9NX95 663 aa20.86■□□□□ 0.93
PRKCD-202ENST00000394729 SCML2Q9UQR0 700 aa20.86■□□□□ 0.93
PRKCD-202ENST00000394729 GJB3O75712 270 aa20.85■□□□□ 0.93
PRKCD-202ENST00000394729 ATP2A2P16615 1042 aaKnown RBP20.85■□□□□ 0.93
PRKCD-202ENST00000394729 CD68P34810 354 aaPredicted RBP20.85■□□□□ 0.93
PRKCD-202ENST00000394729 PGGT1BP53609 377 aa20.85■□□□□ 0.93
PRKCD-202ENST00000394729 MROH9Q5TGP6 573 aa20.85■□□□□ 0.93
PRKCD-202ENST00000394729 SPNS2Q8IVW8 549 aa20.85■□□□□ 0.93
PRKCD-202ENST00000394729 LRRC34Q8IZ02 419 aa20.85■□□□□ 0.93
PRKCD-202ENST00000394729 ATPAF2Q8N5M1 289 aa20.85■□□□□ 0.93
PRKCD-202ENST00000394729 FUBP3Q96I24 572 aaKnown RBP eCLIP20.85■□□□□ 0.93
PRKCD-202ENST00000394729 CLSTN3Q9BQT9 956 aa20.85■□□□□ 0.93
PRKCD-202ENST00000394729 RCOR3Q9P2K3 495 aaPredicted RBP20.85■□□□□ 0.93
PRKCD-202ENST00000394729 PSMC3IPQ9P2W1 217 aaPredicted RBP20.85■□□□□ 0.93
PRKCD-202ENST00000394729 OR6C75A6NL08 312 aa20.85■□□□□ 0.93
PRKCD-202ENST00000394729 PMPCBO75439 489 aa20.85■□□□□ 0.93
PRKCD-202ENST00000394729 INHBAP08476 426 aa20.85■□□□□ 0.93
PRKCD-202ENST00000394729 CERCAMQ5T4B2 595 aa20.85■□□□□ 0.93
PRKCD-202ENST00000394729 PSTKQ8IV42 348 aaKnown RBP20.85■□□□□ 0.93
PRKCD-202ENST00000394729 ATXN2LQ8WWM7 1075 aaKnown RBP20.85■□□□□ 0.93
PRKCD-202ENST00000394729 IGSF8Q969P0 613 aa20.85■□□□□ 0.93
PRKCD-202ENST00000394729 SERPINB11Q96P15 392 aa20.85■□□□□ 0.93
PRKCD-202ENST00000394729 TMEM109Q9BVC6 243 aa20.85■□□□□ 0.93
PRKCD-202ENST00000394729 FOXP3Q9BZS1 431 aa20.85■□□□□ 0.93
PRKCD-202ENST00000394729 DOCK6Q96HP0 2047 aa20.85■□□□□ 0.93
PRKCD-202ENST00000394729 SPTBN5Q9NRC6 3674 aaKnown RBP20.84■□□□□ 0.93
PRKCD-202ENST00000394729 TCP11X1B4DZS4 312 aa20.84■□□□□ 0.93
PRKCD-202ENST00000394729 STX2P32856 288 aa20.84■□□□□ 0.93
PRKCD-202ENST00000394729 IRX4P78413 519 aa20.84■□□□□ 0.93
PRKCD-202ENST00000394729 RELL1Q8IUW5 271 aa20.84■□□□□ 0.93
PRKCD-202ENST00000394729 IPMKQ8NFU5 416 aa20.84■□□□□ 0.93
PRKCD-202ENST00000394729 C8orf48Q96LL4 319 aa20.84■□□□□ 0.93
PRKCD-202ENST00000394729 FERMT1Q9BQL6 677 aa20.84■□□□□ 0.93
PRKCD-202ENST00000394729 SLC13A1Q9BZW2 595 aa20.84■□□□□ 0.93
PRKCD-202ENST00000394729 KCNU1A8MYU2 1149 aa20.84■□□□□ 0.93
PRKCD-202ENST00000394729 E7ESA3 106 aa20.84■□□□□ 0.93
PRKCD-202ENST00000394729 HOXA2O43364 376 aa20.84■□□□□ 0.93
PRKCD-202ENST00000394729 IGLV3-25P01717 112 aa20.84■□□□□ 0.93
PRKCD-202ENST00000394729 CXCL10P02778 98 aa20.84■□□□□ 0.93
PRKCD-202ENST00000394729 PDZD4Q76G19 769 aaPredicted RBP20.84■□□□□ 0.93
PRKCD-202ENST00000394729 TRABD2AQ86V40 505 aa20.84■□□□□ 0.93
PRKCD-202ENST00000394729 CNTD1Q8N815 330 aa20.84■□□□□ 0.93
PRKCD-202ENST00000394729 SIGLEC10Q96LC7 697 aa20.84■□□□□ 0.93
PRKCD-202ENST00000394729 SMC6Q96SB8 1091 aa20.84■□□□□ 0.93
PRKCD-202ENST00000394729 ACSS3Q9H6R3 686 aa20.84■□□□□ 0.93
PRKCD-202ENST00000394729 TRPC7Q9HCX4 862 aa20.84■□□□□ 0.93
PRKCD-202ENST00000394729 TLR8Q9NR97 1041 aaKnown RBP20.84■□□□□ 0.93
PRKCD-202ENST00000394729 SLC38A8A6NNN8 435 aa20.83■□□□□ 0.93
PRKCD-202ENST00000394729 PRRG1O14668 218 aa20.83■□□□□ 0.93
PRKCD-202ENST00000394729 CSH1P0DML2 217 aa20.83■□□□□ 0.93
PRKCD-202ENST00000394729 CSH2P0DML3 217 aa20.83■□□□□ 0.93
PRKCD-202ENST00000394729 ERVK-10P10266 1014 aa20.83■□□□□ 0.93
PRKCD-202ENST00000394729 SYN1P17600 705 aa20.83■□□□□ 0.93
PRKCD-202ENST00000394729 MS4A13Q5J8X5 152 aa20.83■□□□□ 0.93
PRKCD-202ENST00000394729 CHSY1Q86X52 802 aa20.83■□□□□ 0.93
PRKCD-202ENST00000394729 TBC1D31Q96DN5 1066 aa20.83■□□□□ 0.93
PRKCD-202ENST00000394729 FGFR1OP2Q9NVK5 253 aa20.83■□□□□ 0.93
PRKCD-202ENST00000394729 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.83■□□□□ 0.93
PRKCD-202ENST00000394729 RRN3Q9NYV6 651 aa20.83■□□□□ 0.93
PRKCD-202ENST00000394729 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.83■□□□□ 0.93
PRKCD-202ENST00000394729 J3KR12 359 aa20.83■□□□□ 0.92
PRKCD-202ENST00000394729 TSPAN3O60637 253 aa20.83■□□□□ 0.92
PRKCD-202ENST00000394729 APOEP02649 317 aa20.83■□□□□ 0.92
PRKCD-202ENST00000394729 HAPLN1P10915 354 aaPredicted RBP20.83■□□□□ 0.92
PRKCD-202ENST00000394729 SERPINB6P35237 376 aa20.83■□□□□ 0.92
PRKCD-202ENST00000394729 SPRED2Q7Z698 418 aa20.83■□□□□ 0.92
PRKCD-202ENST00000394729 TADA2BQ86TJ2 420 aa20.83■□□□□ 0.92
PRKCD-202ENST00000394729 CYTH2Q99418 400 aa20.83■□□□□ 0.92
PRKCD-202ENST00000394729 GORASP1Q9BQQ3 440 aa20.83■□□□□ 0.92
PRKCD-202ENST00000394729 ARHGEF38Q9NXL2 777 aa20.83■□□□□ 0.92
PRKCD-202ENST00000394729 NKIRAS1Q9NYS0 192 aa20.83■□□□□ 0.92
PRKCD-202ENST00000394729 NEU3Q9UQ49 428 aa20.83■□□□□ 0.92
PRKCD-202ENST00000394729 COL6A1P12109 1028 aa20.82■□□□□ 0.92
PRKCD-202ENST00000394729 PAPOLAP51003 745 aaKnown RBP20.82■□□□□ 0.92
PRKCD-202ENST00000394729 NUGGCQ68CJ6 796 aa20.82■□□□□ 0.92
PRKCD-202ENST00000394729 VSIG1Q86XK7 387 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms