RNA–Protein interactions for RNA: ENST00000394239.7

TUBD1-205, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-205ENST00000394239 SMARCB1Q12824 385 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 CBX2Q14781 532 aaPredicted RBP12.7□□□□□ -0.38
TUBD1-205ENST00000394239 DPYSL2Q16555 572 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 QPCTQ16769 361 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 SLC5A9Q2M3M2 681 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 FNBP1LQ5T0N5 605 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 VSTM1Q6UX27 236 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 PPP1R21Q6ZMI0 780 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 STRADAQ7RTN6 431 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 ANKMY2Q8IV38 441 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.7□□□□□ -0.38
TUBD1-205ENST00000394239 SCN4BQ8IWT1 228 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 SRRM1Q8IYB3 904 aaKnown RBP12.7□□□□□ -0.38
TUBD1-205ENST00000394239 CACNA2D3Q8IZS8 1091 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 CYP4X1Q8N118 509 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 ZMIZ2Q8NF64 920 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 C2orf15Q8WU43 125 aaKnown RBP12.7□□□□□ -0.38
TUBD1-205ENST00000394239 FAM149B1Q96BN6 582 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 FUBP3Q96I24 572 aaKnown RBP eCLIP12.7□□□□□ -0.38
TUBD1-205ENST00000394239 ZNF317Q96PQ6 595 aaPredicted RBP12.7□□□□□ -0.38
TUBD1-205ENST00000394239 ASB2Q96Q27 587 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 LRRC3Q9BY71 257 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 ZNF334Q9HCZ1 680 aaPredicted RBP12.7□□□□□ -0.38
TUBD1-205ENST00000394239 DPP7Q9UHL4 492 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 MAFFQ9ULX9 164 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 AP4E1Q9UPM8 1137 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 TCRBV7S3A2A0A539 114 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 BCLAF3A2AJT9 711 aaKnown RBP12.7□□□□□ -0.38
TUBD1-205ENST00000394239 RASA4BC9J798 803 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 ANKRD65E5RJM6 399 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 E7ESA3 106 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 POC1B-GALNT4F8VUJ3 575 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 RASA4O43374 803 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 DAB1O75553 588 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 FAM200BP0CF97 657 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 L1CAMP32004 1257 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 MATKP42679 507 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 SULT1E1P49888 294 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 ATXN1P54253 815 aaKnown RBP12.7□□□□□ -0.38
TUBD1-205ENST00000394239 MRPS5P82675 430 aaKnown RBP12.7□□□□□ -0.38
TUBD1-205ENST00000394239 GAD2Q05329 585 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 MAPRE1Q15691 268 aaKnown RBP12.7□□□□□ -0.38
TUBD1-205ENST00000394239 SMAD2Q15796 467 aaKnown RBP12.7□□□□□ -0.38
TUBD1-205ENST00000394239 BBS9Q3SYG4 887 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 CES5AQ6NT32 575 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 C4orf50Q6ZRC1 276 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 DNAJB7Q7Z6W7 309 aaPredicted RBP12.7□□□□□ -0.38
TUBD1-205ENST00000394239 TAX1BP1Q86VP1 789 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 CDKL3Q8IVW4 592 aaPredicted RBP12.7□□□□□ -0.38
TUBD1-205ENST00000394239 SIX6OS1Q8N1H7 587 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 ANKRD42Q8N9B4 389 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 ITFG1Q8TB96 612 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 RTP4Q96DX8 246 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 TCEAL4Q96EI5 215 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 SEC16BQ96JE7 1060 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 SMOQ99835 787 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 CORO1BQ9BR76 489 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 NSRP1Q9H0G5 558 aaKnown RBP12.7□□□□□ -0.38
TUBD1-205ENST00000394239 LRRC4Q9HBW1 653 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 EURLQ9NYK6 297 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 NKIRAS1Q9NYS0 192 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 HSFX1Q9UBD0 423 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 SLC24A2Q9UI40 661 aa12.7□□□□□ -0.38
TUBD1-205ENST00000394239 TCF20Q9UGU0 1960 aaKnown RBP12.69□□□□□ -0.38
TUBD1-205ENST00000394239 CHADO15335 359 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 BANF1O75531 89 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 RHOP08100 348 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 VIMP08670 466 aaKnown RBP12.69□□□□□ -0.38
TUBD1-205ENST00000394239 CREB1P16220 341 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 TSHRP16473 764 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 HMGA1P17096 107 aaKnown RBP12.69□□□□□ -0.38
TUBD1-205ENST00000394239 GJA1P17302 382 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 GRIK1P39086 918 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 MAGEA11P43364 429 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 ALDH1A3P47895 512 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 TUFMP49411 452 aaKnown RBP12.69□□□□□ -0.38
TUBD1-205ENST00000394239 USP46P62068 366 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 LRRC14Q15048 493 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 SLC25A52Q3SY17 297 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 MSS51Q4VC12 460 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 ATAT1Q5SQI0 421 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 ARHGEF18Q6ZSZ5 1173 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 TMC8Q8IU68 726 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 PALM2Q8IXS6 379 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 DEFB106AQ8N104 65 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 OTUD6BQ8N6M0 293 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 FBXO36Q8NEA4 188 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 ST13P5Q8NFI4 369 aaPredicted RBP12.69□□□□□ -0.38
TUBD1-205ENST00000394239 KCTD13Q8WZ19 329 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 MAML1Q92585 1016 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 NECAB3Q96P71 396 aaPredicted RBP12.69□□□□□ -0.38
TUBD1-205ENST00000394239 KCTD15Q96SI1 283 aaPredicted RBP12.69□□□□□ -0.38
TUBD1-205ENST00000394239 PIDD1Q9HB75 910 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 USP29Q9HBJ7 922 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 WDR6Q9NNW5 1121 aaKnown RBP12.69□□□□□ -0.38
TUBD1-205ENST00000394239 RAB6BQ9NRW1 208 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 KRT82Q9NSB4 513 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 PSMC3IPQ9P2W1 217 aaPredicted RBP12.69□□□□□ -0.38
TUBD1-205ENST00000394239 DENND4AQ7Z401 1863 aa12.69□□□□□ -0.38
TUBD1-205ENST00000394239 CLUHO75153 1309 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms