RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 LSP1P33241 339 aa19.54■□□□□ 0.72
CLDND1-203ENST00000394181 FDFT1P37268 417 aa19.54■□□□□ 0.72
CLDND1-203ENST00000394181 TUFMP49411 452 aaKnown RBP19.54■□□□□ 0.72
CLDND1-203ENST00000394181 PSEN1P49768 467 aa19.54■□□□□ 0.72
CLDND1-203ENST00000394181 PARP6Q2NL67 630 aa19.54■□□□□ 0.72
CLDND1-203ENST00000394181 TFAP2DQ7Z6R9 452 aa19.54■□□□□ 0.72
CLDND1-203ENST00000394181 CMTR2Q8IYT2 770 aaKnown RBP19.54■□□□□ 0.72
CLDND1-203ENST00000394181 ARFGAP2Q8N6H7 521 aa19.54■□□□□ 0.72
CLDND1-203ENST00000394181 USP33Q8TEY7 942 aa19.54■□□□□ 0.72
CLDND1-203ENST00000394181 C1orf74Q96LT6 269 aa19.54■□□□□ 0.72
CLDND1-203ENST00000394181 UBE2OQ9C0C9 1292 aaKnown RBP19.54■□□□□ 0.72
CLDND1-203ENST00000394181 TCRBV9S1A1TA0A576 114 aa19.54■□□□□ 0.72
CLDND1-203ENST00000394181 ZBBXA8MT70 800 aa19.54■□□□□ 0.72
CLDND1-203ENST00000394181 GJB5O95377 273 aa19.54■□□□□ 0.72
CLDND1-203ENST00000394181 SPATA31D3P0C874 917 aa19.54■□□□□ 0.72
CLDND1-203ENST00000394181 EN2P19622 333 aaPredicted RBP19.54■□□□□ 0.72
CLDND1-203ENST00000394181 ALFQ53S48 1182 aa19.54■□□□□ 0.72
CLDND1-203ENST00000394181 RAP1GAP2Q684P5 730 aa19.54■□□□□ 0.72
CLDND1-203ENST00000394181 SPATA31D4Q6ZUB0 917 aa19.54■□□□□ 0.72
CLDND1-203ENST00000394181 IGSF8Q969P0 613 aa19.54■□□□□ 0.72
CLDND1-203ENST00000394181 TMEM106CQ9BVX2 250 aa19.54■□□□□ 0.72
CLDND1-203ENST00000394181 ACSS3Q9H6R3 686 aa19.54■□□□□ 0.72
CLDND1-203ENST00000394181 NOL6Q9H6R4 1146 aaKnown RBP19.54■□□□□ 0.72
CLDND1-203ENST00000394181 USP12O75317 370 aa19.53■□□□□ 0.72
CLDND1-203ENST00000394181 SLC2A3P11169 496 aa19.53■□□□□ 0.72
CLDND1-203ENST00000394181 CHN1P15882 459 aa19.53■□□□□ 0.72
CLDND1-203ENST00000394181 LAG3P18627 525 aa19.53■□□□□ 0.72
CLDND1-203ENST00000394181 SEC24CP53992 1094 aa19.53■□□□□ 0.72
CLDND1-203ENST00000394181 MPP2Q14168 576 aa19.53■□□□□ 0.72
CLDND1-203ENST00000394181 DDX53Q86TM3 631 aaKnown RBP19.53■□□□□ 0.72
CLDND1-203ENST00000394181 CNTD1Q8N815 330 aa19.53■□□□□ 0.72
CLDND1-203ENST00000394181 ZNF512Q96ME7 567 aaPredicted RBP19.53■□□□□ 0.72
CLDND1-203ENST00000394181 HERC2P3Q9BVR0 1158 aa19.53■□□□□ 0.72
CLDND1-203ENST00000394181 CATSPERBQ9H7T0 1116 aa19.53■□□□□ 0.72
CLDND1-203ENST00000394181 IL23AQ9NPF7 189 aa19.53■□□□□ 0.72
CLDND1-203ENST00000394181 COMMD8Q9NX08 183 aa19.53■□□□□ 0.72
CLDND1-203ENST00000394181 CXXC1Q9P0U4 656 aaPredicted RBP19.53■□□□□ 0.72
CLDND1-203ENST00000394181 IGSF9Q9P2J2 1179 aa19.53■□□□□ 0.72
CLDND1-203ENST00000394181 ZC3H7BQ9UGR2 993 aaKnown RBP19.53■□□□□ 0.72
CLDND1-203ENST00000394181 CHD7Q9P2D1 2997 aa19.53■□□□□ 0.72
CLDND1-203ENST00000394181 FGF10O15520 208 aaPredicted RBP19.53■□□□□ 0.72
CLDND1-203ENST00000394181 IGLV3-27P01718 113 aa19.53■□□□□ 0.72
CLDND1-203ENST00000394181 APOEP02649 317 aa19.53■□□□□ 0.72
CLDND1-203ENST00000394181 PHBP35232 272 aa19.53■□□□□ 0.72
CLDND1-203ENST00000394181 NUMBP49757 651 aa19.53■□□□□ 0.72
CLDND1-203ENST00000394181 CBLBQ13191 982 aa19.53■□□□□ 0.72
CLDND1-203ENST00000394181 TEX44Q53QW1 395 aa19.53■□□□□ 0.72
CLDND1-203ENST00000394181 NADSYN1Q6IA69 706 aa19.53■□□□□ 0.72
CLDND1-203ENST00000394181 FBXL22Q6P050 247 aa19.53■□□□□ 0.72
CLDND1-203ENST00000394181 NLRP14Q86W24 1093 aa19.53■□□□□ 0.72
CLDND1-203ENST00000394181 CIR1Q86X95 450 aaPredicted RBP19.53■□□□□ 0.72
CLDND1-203ENST00000394181 SRRM1Q8IYB3 904 aaKnown RBP19.53■□□□□ 0.72
CLDND1-203ENST00000394181 RTL3Q8N8U3 475 aaKnown RBP19.53■□□□□ 0.72
CLDND1-203ENST00000394181 FERMT1Q9BQL6 677 aa19.53■□□□□ 0.72
CLDND1-203ENST00000394181 STMN4Q9H169 189 aaPredicted RBP19.53■□□□□ 0.72
CLDND1-203ENST00000394181 KIF9Q9HAQ2 790 aa19.53■□□□□ 0.72
CLDND1-203ENST00000394181 OLA1Q9NTK5 396 aaKnown RBP19.53■□□□□ 0.72
CLDND1-203ENST00000394181 MAD1L1Q9Y6D9 718 aa19.53■□□□□ 0.72
CLDND1-203ENST00000394181 ZNF840PA6NDX5 716 aa19.52■□□□□ 0.72
CLDND1-203ENST00000394181 MAFKO60675 156 aa19.52■□□□□ 0.72
CLDND1-203ENST00000394181 LINC00271P0C7V0 271 aa19.52■□□□□ 0.72
CLDND1-203ENST00000394181 GEMIN4P57678 1058 aaKnown RBP19.52■□□□□ 0.72
CLDND1-203ENST00000394181 NRG1Q02297 640 aaPredicted RBP19.52■□□□□ 0.72
CLDND1-203ENST00000394181 KBTBD12Q3ZCT8 623 aa19.52■□□□□ 0.72
CLDND1-203ENST00000394181 FOXR1Q6PIV2 292 aa19.52■□□□□ 0.72
CLDND1-203ENST00000394181 OTOP3Q7RTS5 596 aa19.52■□□□□ 0.72
CLDND1-203ENST00000394181 FRMD8Q9BZ67 464 aaPredicted RBP19.52■□□□□ 0.72
CLDND1-203ENST00000394181 BRD8Q9H0E9 1235 aa19.52■□□□□ 0.72
CLDND1-203ENST00000394181 UBP1Q9NZI7 540 aa19.52■□□□□ 0.72
CLDND1-203ENST00000394181 YIPF1Q9Y548 306 aa19.52■□□□□ 0.72
CLDND1-203ENST00000394181 C1QAP02745 245 aa19.51■□□□□ 0.71
CLDND1-203ENST00000394181 URODP06132 367 aa19.51■□□□□ 0.71
CLDND1-203ENST00000394181 NFKB1P19838 968 aa19.51■□□□□ 0.71
CLDND1-203ENST00000394181 PAPOLAP51003 745 aaKnown RBP19.51■□□□□ 0.71
CLDND1-203ENST00000394181 SESN2P58004 480 aaPredicted RBP19.51■□□□□ 0.71
CLDND1-203ENST00000394181 AFMIDQ63HM1 303 aa19.51■□□□□ 0.71
CLDND1-203ENST00000394181 TDRPQ86YL5 185 aa19.51■□□□□ 0.71
CLDND1-203ENST00000394181 BADQ92934 168 aa19.51■□□□□ 0.71
CLDND1-203ENST00000394181 BTN2A3PQ96KV6 586 aa19.51■□□□□ 0.71
CLDND1-203ENST00000394181 PAFAH2Q99487 392 aa19.51■□□□□ 0.71
CLDND1-203ENST00000394181 PRMT1Q99873 361 aaKnown RBP19.51■□□□□ 0.71
CLDND1-203ENST00000394181 MLPHQ9BV36 600 aaPredicted RBP19.51■□□□□ 0.71
CLDND1-203ENST00000394181 PPANQ9NQ55 473 aaKnown RBP19.51■□□□□ 0.71
CLDND1-203ENST00000394181 A0A1W2PPM1 405 aa19.51■□□□□ 0.71
CLDND1-203ENST00000394181 RAB33AQ14088 237 aa19.51■□□□□ 0.71
CLDND1-203ENST00000394181 UNC5AQ6ZN44 842 aa19.51■□□□□ 0.71
CLDND1-203ENST00000394181 TADA2BQ86TJ2 420 aa19.51■□□□□ 0.71
CLDND1-203ENST00000394181 ATP6V0D2Q8N8Y2 350 aa19.51■□□□□ 0.71
CLDND1-203ENST00000394181 PKNOX2Q96KN3 472 aa19.51■□□□□ 0.71
CLDND1-203ENST00000394181 TEKT5Q96M29 485 aa19.51■□□□□ 0.71
CLDND1-203ENST00000394181 RSPH14Q9UHP6 348 aa19.51■□□□□ 0.71
CLDND1-203ENST00000394181 TTLL3Q9Y4R7 772 aa19.51■□□□□ 0.71
CLDND1-203ENST00000394181 SHROOM3Q8TF72 1996 aa19.51■□□□□ 0.71
CLDND1-203ENST00000394181 PTPRSQ13332 1948 aa19.51■□□□□ 0.71
CLDND1-203ENST00000394181 CXorf49A8MYA2 514 aaPredicted RBP19.5■□□□□ 0.71
CLDND1-203ENST00000394181 RASA4BC9J798 803 aa19.5■□□□□ 0.71
CLDND1-203ENST00000394181 TEX28O15482 410 aa19.5■□□□□ 0.71
CLDND1-203ENST00000394181 RASA4O43374 803 aa19.5■□□□□ 0.71
CLDND1-203ENST00000394181 COCHO43405 550 aa19.5■□□□□ 0.71
CLDND1-203ENST00000394181 EFCAB14O75071 495 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms