RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 YWHAEP62258 255 aaKnown RBP15.93■□□□□ 0.14
CHMP3-202ENST00000393773 PPP2CBP62714 309 aa15.93■□□□□ 0.14
CHMP3-202ENST00000393773 PPP2CAP67775 309 aa15.93■□□□□ 0.14
CHMP3-202ENST00000393773 C6orf118Q5T5N4 469 aa15.93■□□□□ 0.14
CHMP3-202ENST00000393773 HES3Q5TGS1 186 aa15.93■□□□□ 0.14
CHMP3-202ENST00000393773 TCERG1LQ5VWI1 586 aa15.93■□□□□ 0.14
CHMP3-202ENST00000393773 FBXL19Q6PCT2 694 aa15.93■□□□□ 0.14
CHMP3-202ENST00000393773 MMS22LQ6ZRQ5 1243 aa15.93■□□□□ 0.14
CHMP3-202ENST00000393773 KANSL1Q7Z3B3 1105 aa15.93■□□□□ 0.14
CHMP3-202ENST00000393773 MMAAQ8IVH4 418 aaKnown RBP15.93■□□□□ 0.14
CHMP3-202ENST00000393773 SLC35F5Q8WV83 523 aa15.93■□□□□ 0.14
CHMP3-202ENST00000393773 SPATA32Q96LK8 384 aa15.93■□□□□ 0.14
CHMP3-202ENST00000393773 NUCKS1Q9H1E3 243 aaKnown RBP15.93■□□□□ 0.14
CHMP3-202ENST00000393773 GOLPH3LQ9H4A5 285 aa15.93■□□□□ 0.14
CHMP3-202ENST00000393773 PRORYQ9H606 182 aa15.93■□□□□ 0.14
CHMP3-202ENST00000393773 GDF3Q9NR23 364 aa15.93■□□□□ 0.14
CHMP3-202ENST00000393773 AASDHPPTQ9NRN7 309 aa15.93■□□□□ 0.14
CHMP3-202ENST00000393773 ERVW-1Q9UQF0 538 aa15.93■□□□□ 0.14
CHMP3-202ENST00000393773 EDDM13A0A1B0GTR0 161 aa15.92■□□□□ 0.14
CHMP3-202ENST00000393773 M0QYV0 167 aa15.92■□□□□ 0.14
CHMP3-202ENST00000393773 CETN3O15182 167 aa15.92■□□□□ 0.14
CHMP3-202ENST00000393773 ATXN7O15265 892 aaPredicted RBP15.92■□□□□ 0.14
CHMP3-202ENST00000393773 LATO43561 262 aa15.92■□□□□ 0.14
CHMP3-202ENST00000393773 FYNP06241 537 aa15.92■□□□□ 0.14
CHMP3-202ENST00000393773 ITGAVP06756 1048 aa15.92■□□□□ 0.14
CHMP3-202ENST00000393773 SRPRAP08240 638 aaKnown RBP15.92■□□□□ 0.14
CHMP3-202ENST00000393773 C1SP09871 688 aa15.92■□□□□ 0.14
CHMP3-202ENST00000393773 CDK4P11802 303 aa15.92■□□□□ 0.14
CHMP3-202ENST00000393773 NNTQ13423 1086 aa15.92■□□□□ 0.14
CHMP3-202ENST00000393773 CDH18Q13634 790 aa15.92■□□□□ 0.14
CHMP3-202ENST00000393773 RTP5Q14D33 572 aa15.92■□□□□ 0.14
CHMP3-202ENST00000393773 MS4A13Q5J8X5 152 aa15.92■□□□□ 0.14
CHMP3-202ENST00000393773 CARNMT1Q8N4J0 409 aa15.92■□□□□ 0.14
CHMP3-202ENST00000393773 EID2Q8N6I1 236 aa15.92■□□□□ 0.14
CHMP3-202ENST00000393773 DQX1Q8TE96 717 aaKnown RBP15.92■□□□□ 0.14
CHMP3-202ENST00000393773 SLC35C1Q96A29 364 aa15.92■□□□□ 0.14
CHMP3-202ENST00000393773 FAM131CQ96AQ9 280 aa15.92■□□□□ 0.14
CHMP3-202ENST00000393773 SKA1Q96BD8 255 aa15.92■□□□□ 0.14
CHMP3-202ENST00000393773 SLC39A13Q96H72 371 aa15.92■□□□□ 0.14
CHMP3-202ENST00000393773 FAM129BQ96TA1 746 aa15.92■□□□□ 0.14
CHMP3-202ENST00000393773 OMDQ99983 421 aa15.92■□□□□ 0.14
CHMP3-202ENST00000393773 TDRD6O60522 2096 aaKnown RBP15.91■□□□□ 0.14
CHMP3-202ENST00000393773 TARSL2A2RTX5 802 aaKnown RBP15.91■□□□□ 0.14
CHMP3-202ENST00000393773 TYW5A2RUC4 315 aaKnown RBP15.91■□□□□ 0.14
CHMP3-202ENST00000393773 LUC7L3O95232 432 aaKnown RBP15.91■□□□□ 0.14
CHMP3-202ENST00000393773 ZIC2O95409 532 aaPredicted RBP15.91■□□□□ 0.14
CHMP3-202ENST00000393773 ADH1BP00325 375 aa15.91■□□□□ 0.14
CHMP3-202ENST00000393773 PAEPP09466 180 aa15.91■□□□□ 0.14
CHMP3-202ENST00000393773 TBXAS1P24557 533 aaPredicted RBP15.91■□□□□ 0.14
CHMP3-202ENST00000393773 MZF1P28698 734 aaPredicted RBP15.91■□□□□ 0.14
CHMP3-202ENST00000393773 SLC8A1P32418 973 aa15.91■□□□□ 0.14
CHMP3-202ENST00000393773 DRD3P35462 400 aa15.91■□□□□ 0.14
CHMP3-202ENST00000393773 ARRB1P49407 418 aaPredicted RBP15.91■□□□□ 0.14
CHMP3-202ENST00000393773 SFSWAPQ12872 951 aaKnown RBP15.91■□□□□ 0.14
CHMP3-202ENST00000393773 TARDBPQ13148 414 aaKnown RBP eCLIP15.91■□□□□ 0.14
CHMP3-202ENST00000393773 TMEM270Q6UE05 265 aa15.91■□□□□ 0.14
CHMP3-202ENST00000393773 HSCBQ8IWL3 235 aa15.91■□□□□ 0.14
CHMP3-202ENST00000393773 SNIP1Q8TAD8 396 aaKnown RBP15.91■□□□□ 0.14
CHMP3-202ENST00000393773 SERAC1Q96JX3 654 aa15.91■□□□□ 0.14
CHMP3-202ENST00000393773 SERPINB11Q96P15 392 aa15.91■□□□□ 0.14
CHMP3-202ENST00000393773 NRSN2Q9GZP1 204 aa15.91■□□□□ 0.14
CHMP3-202ENST00000393773 XPO7Q9UIA9 1087 aaKnown RBP15.91■□□□□ 0.14
CHMP3-202ENST00000393773 KIAA1257Q9ULG3 409 aa15.91■□□□□ 0.14
CHMP3-202ENST00000393773 TLR6Q9Y2C9 796 aa15.91■□□□□ 0.14
CHMP3-202ENST00000393773 TK2O00142 265 aa15.9■□□□□ 0.14
CHMP3-202ENST00000393773 CALCAP01258 141 aa15.9■□□□□ 0.14
CHMP3-202ENST00000393773 CENPBP07199 599 aaPredicted RBP15.9■□□□□ 0.14
CHMP3-202ENST00000393773 HSP90AA1P07900 732 aaKnown RBP15.9■□□□□ 0.14
CHMP3-202ENST00000393773 JUPP14923 745 aa15.9■□□□□ 0.14
CHMP3-202ENST00000393773 GOT1P17174 413 aa15.9■□□□□ 0.14
CHMP3-202ENST00000393773 RXRGP48443 463 aa15.9■□□□□ 0.14
CHMP3-202ENST00000393773 STK19P49842 368 aaPredicted RBP15.9■□□□□ 0.14
CHMP3-202ENST00000393773 METAP1P53582 386 aa15.9■□□□□ 0.14
CHMP3-202ENST00000393773 PMS1P54277 932 aaKnown RBP15.9■□□□□ 0.14
CHMP3-202ENST00000393773 KRT85P78386 507 aa15.9■□□□□ 0.14
CHMP3-202ENST00000393773 SEMG2Q02383 582 aa15.9■□□□□ 0.14
CHMP3-202ENST00000393773 LRMPQ12912 555 aa15.9■□□□□ 0.14
CHMP3-202ENST00000393773 DCAF6Q58WW2 860 aa15.9■□□□□ 0.14
CHMP3-202ENST00000393773 NAPEPLDQ6IQ20 393 aa15.9■□□□□ 0.14
CHMP3-202ENST00000393773 SND1Q7KZF4 910 aaKnown RBP eCLIP15.9■□□□□ 0.14
CHMP3-202ENST00000393773 TAC4Q86UU9 113 aa15.9■□□□□ 0.14
CHMP3-202ENST00000393773 SPATS2Q86XZ4 545 aaKnown RBP15.9■□□□□ 0.14
CHMP3-202ENST00000393773 CFAP52Q8N1V2 620 aa15.9■□□□□ 0.14
CHMP3-202ENST00000393773 STK40Q8N2I9 435 aa15.9■□□□□ 0.14
CHMP3-202ENST00000393773 SLC39A7Q92504 469 aa15.9■□□□□ 0.14
CHMP3-202ENST00000393773 PTPRN2Q92932 1015 aa15.9■□□□□ 0.14
CHMP3-202ENST00000393773 DDX50Q9BQ39 737 aaKnown RBP15.9■□□□□ 0.14
CHMP3-202ENST00000393773 ERVMER34-1Q9H9K5 563 aa15.9■□□□□ 0.14
CHMP3-202ENST00000393773 SLCO3A1Q9UIG8 710 aa15.9■□□□□ 0.14
CHMP3-202ENST00000393773 TPX2Q9ULW0 747 aaKnown RBP15.9■□□□□ 0.14
CHMP3-202ENST00000393773 ZDHHC9Q9Y397 364 aa15.9■□□□□ 0.14
CHMP3-202ENST00000393773 A0A1W2PQ27 194 aa15.89■□□□□ 0.13
CHMP3-202ENST00000393773 A0A1W2PQ64 194 aa15.89■□□□□ 0.13
CHMP3-202ENST00000393773 RNF225M0QZC1 329 aaPredicted RBP15.89■□□□□ 0.13
CHMP3-202ENST00000393773 TLR4O00206 839 aa15.89■□□□□ 0.13
CHMP3-202ENST00000393773 FBXO21O94952 628 aa15.89■□□□□ 0.13
CHMP3-202ENST00000393773 VAV1P15498 845 aa15.89■□□□□ 0.13
CHMP3-202ENST00000393773 C5AR1P21730 350 aa15.89■□□□□ 0.13
CHMP3-202ENST00000393773 BRD2P25440 801 aaKnown RBP15.89■□□□□ 0.13
CHMP3-202ENST00000393773 PRCPP42785 496 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms