RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 BTBD1Q9H0C5 482 aa12.8□□□□□ -0.36
CTSC-202ENST00000393301 ADAMTS1Q9UHI8 967 aa12.8□□□□□ -0.36
CTSC-202ENST00000393301 EIF2B4Q9UI10 523 aaKnown RBP12.8□□□□□ -0.36
CTSC-202ENST00000393301 TPX2Q9ULW0 747 aaKnown RBP12.8□□□□□ -0.36
CTSC-202ENST00000393301 SMG1Q96Q15 3661 aaKnown RBP12.79□□□□□ -0.36
CTSC-202ENST00000393301 A0A1W2PQC6 194 aa12.79□□□□□ -0.36
CTSC-202ENST00000393301 TARSL2A2RTX5 802 aaKnown RBP12.79□□□□□ -0.36
CTSC-202ENST00000393301 SRRM3A6NNA2 597 aaPredicted RBP12.79□□□□□ -0.36
CTSC-202ENST00000393301 LGALS16A8MUM7 142 aa12.79□□□□□ -0.36
CTSC-202ENST00000393301 PCDHGA12O60330 932 aa12.79□□□□□ -0.36
CTSC-202ENST00000393301 SEMA4FO95754 770 aa12.79□□□□□ -0.36
CTSC-202ENST00000393301 SRPRAP08240 638 aaKnown RBP12.79□□□□□ -0.36
CTSC-202ENST00000393301 FTH1P19P0C7X4 201 aa12.79□□□□□ -0.36
CTSC-202ENST00000393301 POLR2EP19388 210 aaKnown RBP12.79□□□□□ -0.36
CTSC-202ENST00000393301 CD27P26842 260 aa12.79□□□□□ -0.36
CTSC-202ENST00000393301 PON1P27169 355 aa12.79□□□□□ -0.36
CTSC-202ENST00000393301 SLC12A1Q13621 1099 aa12.79□□□□□ -0.36
CTSC-202ENST00000393301 MFN1Q8IWA4 741 aa12.79□□□□□ -0.36
CTSC-202ENST00000393301 AOPEPQ8N6M6 819 aa12.79□□□□□ -0.36
CTSC-202ENST00000393301 ZCCHC14Q8WYQ9 949 aaKnown RBP12.79□□□□□ -0.36
CTSC-202ENST00000393301 IGSF8Q969P0 613 aa12.79□□□□□ -0.36
CTSC-202ENST00000393301 IQCDQ96DY2 449 aa12.79□□□□□ -0.36
CTSC-202ENST00000393301 ERLEC1Q96DZ1 483 aa12.79□□□□□ -0.36
CTSC-202ENST00000393301 MYEOVQ96EZ4 313 aa12.79□□□□□ -0.36
CTSC-202ENST00000393301 C6orf106Q9H6K1 298 aaPredicted RBP12.79□□□□□ -0.36
CTSC-202ENST00000393301 TM7SF3Q9NS93 570 aa12.79□□□□□ -0.36
CTSC-202ENST00000393301 ASNSD1Q9NWL6 643 aa12.79□□□□□ -0.36
CTSC-202ENST00000393301 TOR4AQ9NXH8 423 aa12.79□□□□□ -0.36
CTSC-202ENST00000393301 DKK4Q9UBT3 224 aa12.79□□□□□ -0.36
CTSC-202ENST00000393301 APEX2Q9UBZ4 518 aa12.79□□□□□ -0.36
CTSC-202ENST00000393301 FNDC3AQ9Y2H6 1198 aaKnown RBP12.79□□□□□ -0.36
CTSC-202ENST00000393301 IGSF10Q6WRI0 2623 aa12.79□□□□□ -0.36
CTSC-202ENST00000393301 BAHCC1Q9P281 2608 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 LOC400499M0QZD8 3231 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 GOLGA6L7A0A1B0GV03 622 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 TYW5A2RUC4 315 aaKnown RBP12.78□□□□□ -0.36
CTSC-202ENST00000393301 BECN2A8MW95 431 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 LUC7L3O95232 432 aaKnown RBP12.78□□□□□ -0.36
CTSC-202ENST00000393301 DNTTP04053 509 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 GLI1P08151 1106 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 CSKP41240 450 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 CTSKP43235 329 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 PLK1P53350 603 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 TPM4P67936 248 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 SFSWAPQ12872 951 aaKnown RBP12.78□□□□□ -0.36
CTSC-202ENST00000393301 MTA1Q13330 715 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 HLA-BQ31612 363 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 CCNI2Q6ZMN8 369 aaPredicted RBP12.78□□□□□ -0.36
CTSC-202ENST00000393301 RRAGAQ7L523 313 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 TAC4Q86UU9 113 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 CHCHD4Q8N4Q1 142 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 ZNF606Q8WXB4 792 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 BIRC7Q96CA5 298 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 BTN2A3PQ96KV6 586 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 CAMK1GQ96NX5 476 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 CDC6Q99741 560 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 PRMT1Q99873 361 aaKnown RBP12.78□□□□□ -0.36
CTSC-202ENST00000393301 EDEM3Q9BZQ6 932 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 INTS2Q9H0H0 1204 aaKnown RBP12.78□□□□□ -0.36
CTSC-202ENST00000393301 NUCKS1Q9H1E3 243 aaKnown RBP12.78□□□□□ -0.36
CTSC-202ENST00000393301 PABPC3Q9H361 631 aaKnown RBP12.78□□□□□ -0.36
CTSC-202ENST00000393301 GAREM1Q9H706 876 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 POPDC2Q9HBU9 364 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 CBX8Q9HC52 389 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 TM9SF3Q9HD45 589 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 CYTH4Q9UIA0 394 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 FZD4Q9ULV1 537 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 APOBEC2Q9Y235 224 aaKnown RBP12.78□□□□□ -0.36
CTSC-202ENST00000393301 SLCO1B1Q9Y6L6 691 aa12.78□□□□□ -0.36
CTSC-202ENST00000393301 A0A1B0GTH6 734 aa12.77□□□□□ -0.37
CTSC-202ENST00000393301 MED7O43513 233 aa12.77□□□□□ -0.37
CTSC-202ENST00000393301 DFNA5O60443 496 aa12.77□□□□□ -0.37
CTSC-202ENST00000393301 IGHV4-34P06331 123 aa12.77□□□□□ -0.37
CTSC-202ENST00000393301 COPB1P53618 953 aaKnown RBP12.77□□□□□ -0.37
CTSC-202ENST00000393301 RPS24P62847 133 aaKnown RBP12.77□□□□□ -0.37
CTSC-202ENST00000393301 TEAD4Q15561 434 aa12.77□□□□□ -0.37
CTSC-202ENST00000393301 KIF19Q2TAC6 998 aa12.77□□□□□ -0.37
CTSC-202ENST00000393301 DCAF6Q58WW2 860 aa12.77□□□□□ -0.37
CTSC-202ENST00000393301 FIGNQ5HY92 759 aa12.77□□□□□ -0.37
CTSC-202ENST00000393301 PITRM1Q5JRX3 1037 aa12.77□□□□□ -0.37
CTSC-202ENST00000393301 C9orf64Q5T6V5 341 aa12.77□□□□□ -0.37
CTSC-202ENST00000393301 TTC39BQ5VTQ0 682 aaPredicted RBP12.77□□□□□ -0.37
CTSC-202ENST00000393301 SYPL2Q5VXT5 272 aa12.77□□□□□ -0.37
CTSC-202ENST00000393301 PROSER1Q86XN7 944 aa12.77□□□□□ -0.37
CTSC-202ENST00000393301 ZNF366Q8N895 744 aa12.77□□□□□ -0.37
CTSC-202ENST00000393301 SHC3Q92529 594 aa12.77□□□□□ -0.37
CTSC-202ENST00000393301 SLC2A13Q96QE2 648 aa12.77□□□□□ -0.37
CTSC-202ENST00000393301 NAA15Q9BXJ9 866 aaKnown RBP12.77□□□□□ -0.37
CTSC-202ENST00000393301 MIR1-1HGQ9H1L0 117 aa12.77□□□□□ -0.37
CTSC-202ENST00000393301 TSPY26PQ9H489 355 aa12.77□□□□□ -0.37
CTSC-202ENST00000393301 IL21RQ9HBE5 538 aa12.77□□□□□ -0.37
CTSC-202ENST00000393301 SIX2Q9NPC8 291 aa12.77□□□□□ -0.37
CTSC-202ENST00000393301 RTN4Q9NQC3 1192 aaKnown RBP12.77□□□□□ -0.37
CTSC-202ENST00000393301 MYO6Q9UM54 1294 aa12.77□□□□□ -0.37
CTSC-202ENST00000393301 PCDHGC3Q9UN70 934 aa12.77□□□□□ -0.37
CTSC-202ENST00000393301 NAALADL1Q9UQQ1 740 aa12.77□□□□□ -0.37
CTSC-202ENST00000393301 SIK3Q9Y2K2 1263 aa12.77□□□□□ -0.37
CTSC-202ENST00000393301 PCDHB9Q9Y5E1 797 aa12.77□□□□□ -0.37
CTSC-202ENST00000393301 DOCK4Q8N1I0 1966 aa12.76□□□□□ -0.37
CTSC-202ENST00000393301 EDDM13A0A1B0GTR0 161 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms