RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 JCHAINP01591 159 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 RHOQP17081 205 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 ARFIP2P53365 341 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 MAD2L1Q13257 205 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-203ENST00000393287 SLC12A1Q13621 1099 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 REXO1L1PQ8IX06 675 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 HS6ST3Q8IZP7 471 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 TDRD5Q8NAT2 981 aaKnown RBP8.28□□□□□ -1.08
ATXN3-203ENST00000393287 CFAP61Q8NHU2 1237 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 IL22Q9GZX6 179 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 KCNF1Q9H3M0 494 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 NMRAL1Q9HBL8 299 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 DNALI1O14645 258 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-203ENST00000393287 ATG13O75143 517 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 VPS4BO75351 444 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 NDST2P52849 883 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 PCID2Q5JVF3 399 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 VARS2Q5ST30 1063 aaKnown RBP8.28□□□□□ -1.08
ATXN3-203ENST00000393287 WDR59Q6PJI9 974 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 GLT6D1Q7Z4J2 308 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 KREMEN2Q8NCW0 462 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 OR5B17Q8NGF7 314 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 PTCD2Q8WV60 388 aaKnown RBP8.28□□□□□ -1.08
ATXN3-203ENST00000393287 TRIM51Q9BSJ1 452 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 R3HDMLQ9H3Y0 253 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 PNPLA8Q9NP80 782 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 TLR9Q9NR96 1032 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 GPATCH2LQ9NWQ4 482 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 RNF112Q9ULX5 631 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 COL5A3P25940 1745 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-203ENST00000393287 F8VP50 259 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 DNTTP04053 509 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 POLD2P49005 469 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 C21orf59P57076 290 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 RFTN1Q14699 578 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-203ENST00000393287 SETMARQ53H47 684 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-203ENST00000393287 DDIASQ8IXT1 998 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 HNRNPLLQ8WVV9 542 aaKnown RBP8.28□□□□□ -1.08
ATXN3-203ENST00000393287 CMTM5Q96DZ9 223 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 EIF2AQ9BY44 585 aaKnown RBP8.28□□□□□ -1.08
ATXN3-203ENST00000393287 ECT2Q9H8V3 914 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 GDAP2Q9NXN4 497 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 FLRT1Q9NZU1 646 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 APPL1Q9UKG1 709 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 ERVW-1Q9UQF0 538 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 EIF3LQ9Y262 564 aaKnown RBP8.28□□□□□ -1.08
ATXN3-203ENST00000393287 PCDHGC5Q9Y5F6 944 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 A0A0A0MRY4 1105 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 FAM47DPA6NHR8 397 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 PRNPP04156 253 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 HTR1BP28222 390 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 BRCC3P46736 316 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 SERPINH1P50454 418 aaKnown RBP8.28□□□□□ -1.08
ATXN3-203ENST00000393287 SMAD3P84022 425 aaKnown RBP8.28□□□□□ -1.08
ATXN3-203ENST00000393287 FMO1Q01740 532 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 PFKPQ01813 784 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 PTP4A2Q12974 167 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 PDGFRLQ15198 375 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 CCDC153Q494R4 210 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 PKN3Q6P5Z2 889 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 NYAP1Q6ZVC0 841 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 IFNLR1Q8IU57 520 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-203ENST00000393287 DENND1CQ8IV53 801 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 CDC26Q8NHZ8 85 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 SPATA13Q96N96 652 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 F5H423 210 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-203ENST00000393287 ADAMTS4O75173 837 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 FTH1P02794 183 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 SLC26A9Q7LBE3 791 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 DCLK2Q8N568 766 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 EMC1Q8N766 993 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 ATL1Q8WXF7 558 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 UBE2E3Q969T4 207 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 G3BP2Q9UN86 482 aaKnown RBP8.28□□□□□ -1.08
ATXN3-203ENST00000393287 RPS6KL1Q9Y6S9 549 aa8.28□□□□□ -1.08
ATXN3-203ENST00000393287 IGKV6D-21A0A0A0MT36 114 aa8.27□□□□□ -1.08
ATXN3-203ENST00000393287 SEC31AO94979 1220 aaKnown RBP8.27□□□□□ -1.08
ATXN3-203ENST00000393287 KLHL2O95198 593 aa8.27□□□□□ -1.08
ATXN3-203ENST00000393287 MAGOHP61326 146 aaKnown RBP8.27□□□□□ -1.08
ATXN3-203ENST00000393287 POU4F1Q01851 419 aa8.27□□□□□ -1.08
ATXN3-203ENST00000393287 STX3Q13277 289 aa8.27□□□□□ -1.08
ATXN3-203ENST00000393287 PPP1R26Q5T8A7 1209 aaPredicted RBP8.27□□□□□ -1.08
ATXN3-203ENST00000393287 TMEM159Q96B96 161 aa8.27□□□□□ -1.08
ATXN3-203ENST00000393287 C8orf48Q96LL4 319 aa8.27□□□□□ -1.08
ATXN3-203ENST00000393287 BBS2Q9BXC9 721 aa8.27□□□□□ -1.08
ATXN3-203ENST00000393287 POLMQ9NP87 494 aaPredicted RBP8.27□□□□□ -1.08
ATXN3-203ENST00000393287 SOD2P04179 222 aa8.27□□□□□ -1.09
ATXN3-203ENST00000393287 ERVK-10P10266 1014 aa8.27□□□□□ -1.09
ATXN3-203ENST00000393287 PYGMP11217 842 aa8.27□□□□□ -1.09
ATXN3-203ENST00000393287 CD151P48509 253 aa8.27□□□□□ -1.09
ATXN3-203ENST00000393287 CLCNKBP51801 687 aa8.27□□□□□ -1.09
ATXN3-203ENST00000393287 RAP1GDS1P52306 607 aa8.27□□□□□ -1.09
ATXN3-203ENST00000393287 GRSF1Q12849 480 aaKnown RBP eCLIP8.27□□□□□ -1.09
ATXN3-203ENST00000393287 TARBP2Q15633 366 aaKnown RBP8.27□□□□□ -1.09
ATXN3-203ENST00000393287 RALGPS1Q5JS13 557 aa8.27□□□□□ -1.09
ATXN3-203ENST00000393287 CACHD1Q5VU97 1274 aa8.27□□□□□ -1.09
ATXN3-203ENST00000393287 RAP1GAP2Q684P5 730 aa8.27□□□□□ -1.09
ATXN3-203ENST00000393287 MFSD5Q6N075 450 aa8.27□□□□□ -1.09
ATXN3-203ENST00000393287 LPCAT2Q7L5N7 544 aa8.27□□□□□ -1.09
ATXN3-203ENST00000393287 KDELC2Q7Z4H8 507 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms