RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 TBCBQ99426 244 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 MRPL9Q9BYD2 267 aaKnown RBP20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 KCNK13Q9HB14 408 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 HEY2Q9UBP5 337 aa20.44■□□□□ 0.86
CSNK1D-203ENST00000392334 WDR91A4D1P6 747 aa20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 MCF2LO15068 1137 aa20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 STIP1P31948 543 aaKnown RBP20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 MMRN1Q13201 1228 aa20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 SDHAF4Q5VUM1 108 aa20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 FUT10Q6P4F1 479 aa20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 RFX6Q8HWS3 928 aa20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 LRRC43Q8N309 656 aa20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.43■□□□□ 0.864e-6■■□□□ 12.3
CSNK1D-203ENST00000392334 ADAM32Q8TC27 787 aa20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 SPDL1Q96EA4 605 aa20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 C10orf88Q9H8K7 445 aa20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 CSNK1G1Q9HCP0 422 aa20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 DCTN4Q9UJW0 460 aa20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 TEX264Q9Y6I9 313 aa20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 DPYSL4O14531 572 aa20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 NEBLO76041 1014 aa20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 BAIAP3O94812 1187 aa20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 PTDSS1P48651 473 aaKnown RBP20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 CDH6P55285 790 aa20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 TSNAXIP1Q2TAA8 658 aa20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 RTP2Q5QGT7 225 aa20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 SCN4BQ8IWT1 228 aa20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 LMNTD2Q8IXW0 634 aa20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 MMADHCQ9H3L0 296 aaPredicted RBP20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 DMAP1Q9NPF5 467 aaPredicted RBP20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 ARL8BQ9NVJ2 186 aa20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 ZFATQ9P243 1243 aa20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 STOML1Q9UBI4 398 aa20.43■□□□□ 0.86
CSNK1D-203ENST00000392334 GSC2O15499 205 aa20.42■□□□□ 0.86
CSNK1D-203ENST00000392334 ENTPD5O75356 428 aa20.42■□□□□ 0.86
CSNK1D-203ENST00000392334 ENDOD1O94919 500 aa20.42■□□□□ 0.86
CSNK1D-203ENST00000392334 ELK3P41970 407 aa20.42■□□□□ 0.86
CSNK1D-203ENST00000392334 MATKP42679 507 aa20.42■□□□□ 0.86
CSNK1D-203ENST00000392334 ALDH7A1P49419 539 aaKnown RBP20.42■□□□□ 0.86
CSNK1D-203ENST00000392334 GPR15P49685 360 aa20.42■□□□□ 0.86
CSNK1D-203ENST00000392334 SULT1E1P49888 294 aa20.42■□□□□ 0.86
CSNK1D-203ENST00000392334 DAOAP59103 153 aa20.42■□□□□ 0.86
CSNK1D-203ENST00000392334 OVGP1Q12889 678 aa20.42■□□□□ 0.86
CSNK1D-203ENST00000392334 KCNJ11Q14654 390 aa20.42■□□□□ 0.86
CSNK1D-203ENST00000392334 MAPRE1Q15691 268 aaKnown RBP20.42■□□□□ 0.86
CSNK1D-203ENST00000392334 CA9Q16790 459 aa20.42■□□□□ 0.86
CSNK1D-203ENST00000392334 RAB41Q5JT25 222 aa20.42■□□□□ 0.86
CSNK1D-203ENST00000392334 SPOUT1Q5T280 376 aaKnown RBP20.42■□□□□ 0.86
CSNK1D-203ENST00000392334 APLFQ8IW19 511 aaPredicted RBP20.42■□□□□ 0.86
CSNK1D-203ENST00000392334 MICAL1Q8TDZ2 1067 aa20.42■□□□□ 0.86
CSNK1D-203ENST00000392334 EDEM1Q92611 657 aa20.42■□□□□ 0.86
CSNK1D-203ENST00000392334 FRMD8Q9BZ67 464 aaPredicted RBP20.42■□□□□ 0.86
CSNK1D-203ENST00000392334 ZCWPW1Q9H0M4 648 aa20.42■□□□□ 0.86
CSNK1D-203ENST00000392334 CHMP2BQ9UQN3 213 aa20.42■□□□□ 0.86
CSNK1D-203ENST00000392334 TCRBV9S1A1TA0A576 114 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 GOLGA8RI6L899 631 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 CAPN9O14815 690 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 CHADO15335 359 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 EFCAB14O75071 495 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 ZBED1O96006 694 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 DLDP09622 509 aaKnown RBP20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 RBP3P10745 1247 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 NME3Q13232 169 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 NOMO1Q15155 1222 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 ANO7Q6IWH7 933 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 RSPO2Q6UXX9 243 aaPredicted RBP20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 LRRC6Q86X45 466 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 IGDCC3Q8IVU1 814 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 FAM71DQ8N9W8 422 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 ATAD1Q8NBU5 361 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 ZNF689Q96CS4 500 aaPredicted RBP20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 SERAC1Q96JX3 654 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 C11orf84Q9BUA3 381 aaPredicted RBP20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 TMEM120AQ9BXJ8 343 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 OSBPL1AQ9BXW6 950 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 SF3B1O75533 1304 aaKnown RBP eCLIP20.41■□□□□ 0.863e-6■■■■■ 47.9
CSNK1D-203ENST00000392334 A0A0G2JND7 137 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 SYN3O14994 580 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 SOAT2O75908 522 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 FYNP06241 537 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 INHBAP08476 426 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 PTPN9P43378 593 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 BASP1P80723 227 aaKnown RBP20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 MRPS35P82673 323 aaKnown RBP20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 DDR2Q16832 855 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 PRSS55Q6UWB4 352 aaPredicted RBP20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 FAM131BQ86XD5 332 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 TTC9BQ8N6N2 239 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 GPR152Q8TDT2 470 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 KLF6Q99612 283 aaPredicted RBP20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 C12orf65Q9H3J6 166 aaKnown RBP20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 RC3H2Q9HBD1 1191 aaKnown RBP20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 POPDC2Q9HBU9 364 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 TMPRSS4Q9NRS4 437 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 IKBKGQ9Y6K9 419 aa20.41■□□□□ 0.86
CSNK1D-203ENST00000392334 CHD7Q9P2D1 2997 aa20.4■□□□□ 0.86
CSNK1D-203ENST00000392334 CCDC189A1A4V9 331 aa20.4■□□□□ 0.86
CSNK1D-203ENST00000392334 NCAM1P13591 858 aa20.4■□□□□ 0.86
CSNK1D-203ENST00000392334 DESP17661 470 aa20.4■□□□□ 0.86
CSNK1D-203ENST00000392334 SCNN1AP37088 669 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms