RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 IFNEQ86WN2 208 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 PSTKQ8IV42 348 aaKnown RBP16.88■□□□□ 0.29
SNX9-201ENST00000392185 TMEM199Q8N511 208 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 CCDC185Q8N715 623 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 SCAMP5Q8TAC9 235 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 DQX1Q8TE96 717 aaKnown RBP16.88■□□□□ 0.29
SNX9-201ENST00000392185 FNIP1Q8TF40 1166 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 SPDL1Q96EA4 605 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 GMIPQ9P107 970 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 UBA2Q9UBT2 640 aaPredicted RBP16.88■□□□□ 0.29
SNX9-201ENST00000392185 NR2E3Q9Y5X4 410 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 C2CD4BA6NLJ0 364 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 CTNNB1P35222 781 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 SYTL3Q4VX76 610 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 FIBCD1Q8N539 461 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 LMO3Q8TAP4 145 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 MTBPQ96DY7 904 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 HNRNPABQ99729 332 aaKnown RBP16.87■□□□□ 0.29
SNX9-201ENST00000392185 L3MBTL1Q9Y468 752 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 COL2A1P02458 1487 aaPredicted RBP16.87■□□□□ 0.29
SNX9-201ENST00000392185 ESRRBO95718 433 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 GLP2RO95838 553 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 TLE2Q04725 743 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 TRIM32Q13049 653 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 LAYNQ6UX15 382 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 SPATA24Q86W54 205 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 MFN1Q8IWA4 741 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 TMEM130Q8N3G9 435 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 EIF1ADQ8N9N8 165 aaKnown RBP16.87■□□□□ 0.29
SNX9-201ENST00000392185 SLC26A7Q8TE54 656 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 TRIB2Q92519 343 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 SDCCAG3Q96C92 435 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 SRPK1Q96SB4 655 aaKnown RBP16.87■□□□□ 0.29
SNX9-201ENST00000392185 THTPAQ9BU02 230 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 UBE2OQ9C0C9 1292 aaKnown RBP16.87■□□□□ 0.29
SNX9-201ENST00000392185 EML4Q9HC35 981 aaKnown RBP16.87■□□□□ 0.29
SNX9-201ENST00000392185 MYO5AQ9Y4I1 1855 aaKnown RBP16.87■□□□□ 0.29
SNX9-201ENST00000392185 SIPA1L3O60292 1781 aaPredicted RBP16.87■□□□□ 0.29
SNX9-201ENST00000392185 CSH1P0DML2 217 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 CSH2P0DML3 217 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 CPA3P15088 417 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 TARSP26639 723 aaKnown RBP16.87■□□□□ 0.29
SNX9-201ENST00000392185 CD86P42081 329 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 HTRA3P83110 453 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 AGAP9Q5VTM2 703 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 IQCKQ8N0W5 287 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 PHF21BQ96EK2 531 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 DNMT3LQ9UJW3 386 aa16.87■□□□□ 0.29
SNX9-201ENST00000392185 A0A096LPK6 155 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 ERI2A8K979 691 aaKnown RBP16.86■□□□□ 0.29
SNX9-201ENST00000392185 RALBP11234 206 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 NRLP54845 237 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 NOMO1Q15155 1222 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 VARS2Q5ST30 1063 aaKnown RBP16.86■□□□□ 0.29
SNX9-201ENST00000392185 FUT10Q6P4F1 479 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 MAGEB18Q96M61 343 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 CDK5RAP1Q96SZ6 601 aaKnown RBP16.86■□□□□ 0.29
SNX9-201ENST00000392185 VAT1Q99536 393 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.86■□□□□ 0.294e-10■■■■■ 30.5
SNX9-201ENST00000392185 SDCBP2Q9H190 292 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 DNAJC16Q9Y2G8 782 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 CRYL1Q9Y2S2 319 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 CNMDO75829 334 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 ANP32DO95626 131 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 MAP4P27816 1152 aaKnown RBP16.86■□□□□ 0.29
SNX9-201ENST00000392185 PLK1P53350 603 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 WNT7BP56706 349 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 C1orf220Q5T0J3 134 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 CTU1Q7Z7A3 348 aaKnown RBP16.86■□□□□ 0.29
SNX9-201ENST00000392185 SPPL2BQ8TCT7 592 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 NCLNQ969V3 563 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 BRD8Q9H0E9 1235 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 DCDC2Q9UHG0 476 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 EIF4E1BA6NMX2 242 aaKnown RBP16.86■□□□□ 0.29
SNX9-201ENST00000392185 NOL3O60936 208 aaKnown RBP16.86■□□□□ 0.29
SNX9-201ENST00000392185 CRTAMO95727 393 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 CD151P48509 253 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 B3GNT9Q6UX72 402 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 LRRC43Q8N309 656 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 ZMAT2Q96NC0 199 aaKnown RBP16.86■□□□□ 0.29
SNX9-201ENST00000392185 SEMA3CQ99985 751 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 ADGRE3Q9BY15 652 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 ZYG11BQ9C0D3 744 aa16.86■□□□□ 0.29
SNX9-201ENST00000392185 ILKAPQ9H0C8 392 aaPredicted RBP16.86■□□□□ 0.29
SNX9-201ENST00000392185 MOXD2PA6NHM9 499 aa16.85■□□□□ 0.29
SNX9-201ENST00000392185 OR6C75A6NL08 312 aa16.85■□□□□ 0.29
SNX9-201ENST00000392185 CHADO15335 359 aa16.85■□□□□ 0.29
SNX9-201ENST00000392185 MFSD11O43934 449 aa16.85■□□□□ 0.29
SNX9-201ENST00000392185 PGAM1P18669 254 aa16.85■□□□□ 0.29
SNX9-201ENST00000392185 TKTP29401 623 aaKnown RBP16.85■□□□□ 0.29
SNX9-201ENST00000392185 SERPINB4P48594 390 aa16.85■□□□□ 0.29
SNX9-201ENST00000392185 CA9Q16790 459 aa16.85■□□□□ 0.29
SNX9-201ENST00000392185 ZNF697Q5TEC3 545 aa16.85■□□□□ 0.29
SNX9-201ENST00000392185 RGS9BPQ6ZS82 235 aa16.85■□□□□ 0.29
SNX9-201ENST00000392185 RBM23Q86U06 439 aaKnown RBP16.85■□□□□ 0.29
SNX9-201ENST00000392185 PRPF39Q86UA1 669 aaKnown RBP16.85■□□□□ 0.29
SNX9-201ENST00000392185 CACYBPQ9HB71 228 aaKnown RBP16.85■□□□□ 0.29
SNX9-201ENST00000392185 PRSS55Q6UWB4 352 aaPredicted RBP16.85■□□□□ 0.29
SNX9-201ENST00000392185 TBL1YQ9BQ87 522 aa16.85■□□□□ 0.29
SNX9-201ENST00000392185 EMILIN2Q9BXX0 1053 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms