RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 PPIGQ13427 754 aaKnown RBP eCLIP11.75□□□□□ -0.536e-7■■■■■ 27
SMARCAL1-203ENST00000392128 RASA2Q15283 850 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 SKIDA1Q1XH10 827 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 MS4A13Q5J8X5 152 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 AFMIDQ63HM1 303 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 C16orf59Q7L2K0 433 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 C14orf80Q86SX3 495 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 MIB1Q86YT6 1006 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 ARHGAP12Q8IWW6 846 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 PALM2Q8IXS6 379 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 RTL3Q8N8U3 475 aaKnown RBP11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 MYRFLQ96LU7 910 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 TSGA13Q96PP4 275 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 CCSER2Q9H7U1 834 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 CNOT10Q9H9A5 744 aaKnown RBP11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 PPARGC1AQ9UBK2 798 aaKnown RBP11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 TRHDEQ9UKU6 1024 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 MAFFQ9ULX9 164 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 CHMP2BQ9UQN3 213 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 NYNRINQ9P2P1 1898 aaKnown RBP11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 IGLV3-10A0A075B6K4 115 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 SLC12A8A0AV02 714 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 KCNK1O00180 336 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 AVILO75366 819 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 HSPA1AP0DMV8 641 aaKnown RBP11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 HSPA1BP0DMV9 641 aaKnown RBP11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 MLNP12872 115 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 HMGA1P17096 107 aaKnown RBP11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 SSTR1P30872 391 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 KLHDC10Q6PID8 442 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 C3orf62Q6ZUJ4 267 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 TAOK1Q7L7X3 1001 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 IGDCC3Q8IVU1 814 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 AGGF1Q8N302 714 aaeCLIP11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 TRMT2BQ96GJ1 504 aaKnown RBP11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 CELF6Q96J87 481 aaKnown RBP11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 ACSS3Q9H6R3 686 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 CYP4F11Q9HBI6 524 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 PRDM10Q9NQV6 1147 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 KLHL8Q9P2G9 620 aaPredicted RBP11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 CTNNAL1Q9UBT7 734 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 SLC24A2Q9UI40 661 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 RABGEF1Q9UJ41 708 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 HBS1LQ9Y450 684 aaKnown RBP11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 YIPF1Q9Y548 306 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 PCDHB12Q9Y5F1 795 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 GJB5O95377 273 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 CCNCP24863 283 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 PSMB4P28070 264 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 GCAP28676 217 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 MMP13P45452 471 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 ALDH1A3P47895 512 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 CREMQ03060 361 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 MTM1Q13496 603 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 NUGGCQ68CJ6 796 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 LRRC31Q6UY01 552 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 CAPN12Q6ZSI9 719 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 PID1Q7Z2X4 250 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 NLRP14Q86W24 1093 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 CEP41Q9BYV8 373 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 MRPL17Q9NRX2 175 aaKnown RBP11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 DONSONQ9NYP3 566 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 DNMT3LQ9UJW3 386 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 ANAPC1Q9H1A4 1944 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 ZNF840PA6NDX5 716 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 LILRB3O75022 631 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 FGBP02675 491 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 LINC00271P0C7V0 271 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 RHOQP17081 205 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 ATP5C1P36542 298 aaKnown RBP11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 MDH1P40925 334 aaKnown RBP11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 KLHL38Q2WGJ6 581 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 TEX44Q53QW1 395 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 EXOC3L1Q86VI1 746 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 LRRC49Q8IUZ0 686 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 TCEAL8Q8IYN2 117 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 ATPAF2Q8N5M1 289 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 ZSCAN18Q8TBC5 510 aaPredicted RBP11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 DEPDC1BQ8WUY9 529 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 ZNF512Q96ME7 567 aaPredicted RBP11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 PRMT1Q99873 361 aaKnown RBP11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 ZYG11BQ9C0D3 744 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 GBA3Q9H227 469 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 VANGL2Q9ULK5 521 aa11.74□□□□□ -0.53
SMARCAL1-203ENST00000392128 ZBBXA8MT70 800 aa11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 DFFAO00273 331 aa11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 GSTA2P09210 222 aa11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 KCNA4P22459 653 aa11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 IRAK1P51617 712 aa11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 GEMIN4P57678 1058 aaKnown RBP11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 GNGT1P63211 74 aa11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 FPGSQ05932 587 aa11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 ZBTB17Q13105 803 aa11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 VEPH1Q14D04 833 aa11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 ITPRIPL1Q6GPH6 555 aa11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 LRRC8BQ6P9F7 803 aa11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 UMODL1-AS1Q8N2C9 162 aa11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 PDCD7Q8N8D1 485 aaKnown RBP11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 FBF1Q8TES7 1133 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms